RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 TFAP4Q01664 338 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 ZSCAN26Q16670 478 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 IFIT1BQ5T764 474 aaKnown RBP12.32□□□□□ -0.44
EWSR1-217ENST00000483415 RBM26Q5T8P6 1007 aaKnown RBP12.32□□□□□ -0.44
EWSR1-217ENST00000483415 REXO1L1PQ8IX06 675 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.32□□□□□ -0.44
EWSR1-217ENST00000483415 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.32□□□□□ -0.441e-9■□□□□ 8.3
EWSR1-217ENST00000483415 ZBTB43O43298 467 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 FDX1P10109 184 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 VEGFAP15692 232 aaPredicted RBP12.32□□□□□ -0.44
EWSR1-217ENST00000483415 IFNAR1P17181 557 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 TRAF1Q13077 416 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 RBM43Q6ZSC3 357 aaKnown RBP12.32□□□□□ -0.44
EWSR1-217ENST00000483415 DEFB129Q9H1M3 183 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 AS3MTQ9HBK9 375 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 IL17RBQ9NRM6 502 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 HPS5Q9UPZ3 1129 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 RLFQ13129 1914 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 EPS15P42566 896 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 CCZ1BP86790 482 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 CCZ1P86791 482 aaPredicted RBP12.32□□□□□ -0.44
EWSR1-217ENST00000483415 PICALMQ13492 652 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 TEX35Q5T0J7 233 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 GPATCH4Q5T3I0 446 aaKnown RBP12.32□□□□□ -0.44
EWSR1-217ENST00000483415 CDC37L1Q7L3B6 337 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 ZNF654Q8IZM8 581 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 SAMD3Q8N6K7 520 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 SPZ1Q9BXG8 430 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 RNF26Q9BY78 433 aaPredicted RBP12.32□□□□□ -0.44
EWSR1-217ENST00000483415 CLIP2Q9UDT6 1046 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 SLC12A7Q9Y666 1083 aa12.32□□□□□ -0.44
EWSR1-217ENST00000483415 TPM4P67936 248 aa12.31□□□□□ -0.44
EWSR1-217ENST00000483415 TROAPQ12815 778 aa12.31□□□□□ -0.44
EWSR1-217ENST00000483415 ARID5BQ14865 1188 aa12.31□□□□□ -0.44
EWSR1-217ENST00000483415 ABCB5Q2M3G0 1257 aa12.31□□□□□ -0.44
EWSR1-217ENST00000483415 TPRNQ4KMQ1 711 aa12.31□□□□□ -0.44
EWSR1-217ENST00000483415 BTNL9Q6UXG8 535 aa12.31□□□□□ -0.44
EWSR1-217ENST00000483415 CCAR2Q8N163 923 aaKnown RBP12.31□□□□□ -0.44
EWSR1-217ENST00000483415 UPF3BQ9BZI7 483 aaKnown RBP12.31□□□□□ -0.44
EWSR1-217ENST00000483415 SH3GLB2Q9NR46 395 aa12.31□□□□□ -0.44
EWSR1-217ENST00000483415 SAP30BPQ9UHR5 308 aaKnown RBP12.31□□□□□ -0.44
EWSR1-217ENST00000483415 KCNG1Q9UIX4 513 aa12.31□□□□□ -0.44
EWSR1-217ENST00000483415 ME3Q16798 604 aa12.31□□□□□ -0.44
EWSR1-217ENST00000483415 DRC7Q8IY82 874 aa12.31□□□□□ -0.44
EWSR1-217ENST00000483415 FBXO18Q8NFZ0 1043 aa12.31□□□□□ -0.44
EWSR1-217ENST00000483415 BRF1Q92994 677 aa12.31□□□□□ -0.44
EWSR1-217ENST00000483415 TRIM5Q9C035 493 aa12.31□□□□□ -0.44
EWSR1-217ENST00000483415 ARHGEF10LQ9HCE6 1279 aa12.31□□□□□ -0.44
EWSR1-217ENST00000483415 MYPNQ86TC9 1320 aa12.31□□□□□ -0.44
EWSR1-217ENST00000483415 NF2P35240 595 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 ANO6Q4KMQ2 910 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 SH3D19Q5HYK7 790 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 ANGEL2Q5VTE6 544 aaKnown RBP12.3□□□□□ -0.44
EWSR1-217ENST00000483415 SAMD7Q7Z3H4 446 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 SCYL3Q8IZE3 742 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 LPAR1Q92633 364 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 KAT14Q9H8E8 782 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 GGA3Q9NZ52 723 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 RRP15Q9Y3B9 282 aaKnown RBP12.3□□□□□ -0.44
EWSR1-217ENST00000483415 PCDHAC2Q9Y5I4 1007 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 ELP1O95163 1332 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 PALM3A6NDB9 673 aaPredicted RBP12.3□□□□□ -0.44
EWSR1-217ENST00000483415 RANBP6O60518 1105 aaKnown RBP12.3□□□□□ -0.44
EWSR1-217ENST00000483415 NEMFO60524 1076 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 DNM1Q05193 864 aaKnown RBP12.3□□□□□ -0.44
EWSR1-217ENST00000483415 TBC1D10BQ4KMP7 808 aaPredicted RBP12.3□□□□□ -0.44
EWSR1-217ENST00000483415 PPP1R18Q6NYC8 613 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 SULF1Q8IWU6 871 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 ZFPM1Q8IX07 1006 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 ZBTB21Q9ULJ3 1066 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 TMX2Q9Y320 296 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 CYP2D7A0A087X1C5 515 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 KLF18A0A0U1RQI7 1052 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 TCP10L2B9ZVM9 353 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 GUCY1A2P33402 732 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 USP14P54578 494 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 CT47A1Q5JQC4 288 aaPredicted RBP12.3□□□□□ -0.44
EWSR1-217ENST00000483415 PACS2Q86VP3 889 aa12.3□□□□□ -0.44
EWSR1-217ENST00000483415 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.3□□□□□ -0.44
EWSR1-217ENST00000483415 C19orf81C9J6K1 198 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 POLR3GO15318 223 aaPredicted RBP12.29□□□□□ -0.44
EWSR1-217ENST00000483415 FMNL1O95466 1100 aaPredicted RBP12.29□□□□□ -0.44
EWSR1-217ENST00000483415 METAP2P50579 478 aaKnown RBP eCLIP12.29□□□□□ -0.44
EWSR1-217ENST00000483415 MCTP2Q6DN12 878 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 GOLGA5Q8TBA6 731 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 DYNLL2Q96FJ2 89 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 PSD3Q9NYI0 1048 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 PRPF3O43395 683 aaKnown RBP12.29□□□□□ -0.44
EWSR1-217ENST00000483415 ATP8B1O43520 1251 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 AKR1B1P15121 316 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 NTRK3Q16288 839 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 ATL3Q6DD88 541 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 GALNT17Q6IS24 598 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 SARM1Q6SZW1 724 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 FANCBQ8NB91 859 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 KLRG1Q96E93 195 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 MTMR8Q96EF0 704 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 KIAA1683Q9H0B3 1180 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 VEZTQ9HBM0 779 aa12.29□□□□□ -0.44
EWSR1-217ENST00000483415 JRKLQ9Y4A0 524 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms