RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 HHIPL1Q96JK4 782 aa5.57□□□□□ -1.52
LAPTM4A-202ENST00000483117 IRF2BPLQ9H1B7 796 aa5.57□□□□□ -1.52
LAPTM4A-202ENST00000483117 FAM86C2PA6NEL3 165 aa5.56□□□□□ -1.52
LAPTM4A-202ENST00000483117 SIGLEC6O43699 453 aa5.56□□□□□ -1.52
LAPTM4A-202ENST00000483117 NRDCO43847 1150 aa5.56□□□□□ -1.52
LAPTM4A-202ENST00000483117 CCNFP41002 786 aa5.56□□□□□ -1.52
LAPTM4A-202ENST00000483117 AMIGO3Q86WK7 504 aa5.56□□□□□ -1.52
LAPTM4A-202ENST00000483117 SLITRK4Q8IW52 837 aa5.56□□□□□ -1.52
LAPTM4A-202ENST00000483117 SLC6A18Q96N87 628 aa5.56□□□□□ -1.52
LAPTM4A-202ENST00000483117 SLC9A7Q96T83 725 aa5.56□□□□□ -1.52
LAPTM4A-202ENST00000483117 NT5C1AQ9BXI3 368 aa5.56□□□□□ -1.52
LAPTM4A-202ENST00000483117 MKRN2Q9H000 416 aaKnown RBP5.56□□□□□ -1.52
LAPTM4A-202ENST00000483117 GCM1Q9NP62 436 aa5.56□□□□□ -1.52
LAPTM4A-202ENST00000483117 GFOD1Q9NXC2 390 aa5.56□□□□□ -1.52
LAPTM4A-202ENST00000483117 TEX51A0A1B0GUA7 166 aa5.55□□□□□ -1.52
LAPTM4A-202ENST00000483117 OR14I1A6ND48 311 aa5.55□□□□□ -1.52
LAPTM4A-202ENST00000483117 MEIS3P2A8K0S8 358 aa5.55□□□□□ -1.52
LAPTM4A-202ENST00000483117 TNFRSF10CO14798 259 aa5.55□□□□□ -1.52
LAPTM4A-202ENST00000483117 SEMA7AO75326 666 aa5.55□□□□□ -1.52
LAPTM4A-202ENST00000483117 SDHBP21912 280 aa5.55□□□□□ -1.52
LAPTM4A-202ENST00000483117 KIR2DL1P43626 348 aaPredicted RBP5.55□□□□□ -1.52
LAPTM4A-202ENST00000483117 KIR2DL2P43627 348 aaPredicted RBP5.55□□□□□ -1.52
LAPTM4A-202ENST00000483117 KIR3DS1Q14943 382 aa5.55□□□□□ -1.52
LAPTM4A-202ENST00000483117 PLCD4Q9BRC7 762 aa5.55□□□□□ -1.52
LAPTM4A-202ENST00000483117 SPON2Q9BUD6 331 aa5.55□□□□□ -1.52
LAPTM4A-202ENST00000483117 CHST7Q9NS84 486 aa5.55□□□□□ -1.52
LAPTM4A-202ENST00000483117 FBXL21Q9UKT6 434 aa5.55□□□□□ -1.52
LAPTM4A-202ENST00000483117 ZNF16P17020 682 aaPredicted RBP5.54□□□□□ -1.52
LAPTM4A-202ENST00000483117 CTSKP43235 329 aa5.54□□□□□ -1.52
LAPTM4A-202ENST00000483117 LRRFIP1Q32MZ4 808 aaKnown RBP5.54□□□□□ -1.52
LAPTM4A-202ENST00000483117 KIAA0825Q8IV33 1275 aa5.54□□□□□ -1.52
LAPTM4A-202ENST00000483117 CNOT6Q9ULM6 557 aaKnown RBP5.54□□□□□ -1.52
LAPTM4A-202ENST00000483117 INHBBP09529 407 aa5.53□□□□□ -1.52
LAPTM4A-202ENST00000483117 ACRP10323 421 aa5.53□□□□□ -1.52
LAPTM4A-202ENST00000483117 RTP1P59025 263 aa5.53□□□□□ -1.52
LAPTM4A-202ENST00000483117 SRSF3P84103 164 aaKnown RBP5.53□□□□□ -1.52
LAPTM4A-202ENST00000483117 AUHQ13825 339 aaKnown RBP5.53□□□□□ -1.52
LAPTM4A-202ENST00000483117 TTLL10Q6ZVT0 673 aa5.53□□□□□ -1.52
LAPTM4A-202ENST00000483117 FCRL2Q96LA5 508 aaPredicted RBP5.53□□□□□ -1.52
LAPTM4A-202ENST00000483117 BCL11AQ9H165 835 aa5.53□□□□□ -1.52
LAPTM4A-202ENST00000483117 CRTAC1Q9NQ79 661 aa5.53□□□□□ -1.52
LAPTM4A-202ENST00000483117 GPR55Q9Y2T6 319 aaPredicted RBP5.53□□□□□ -1.52
LAPTM4A-202ENST00000483117 PCDHB12Q9Y5F1 795 aa5.53□□□□□ -1.52
LAPTM4A-202ENST00000483117 FADS2P1A8MWK0 482 aa5.52□□□□□ -1.53
LAPTM4A-202ENST00000483117 C9IYK1 514 aa5.52□□□□□ -1.53
LAPTM4A-202ENST00000483117 SSPNQ14714 243 aa5.52□□□□□ -1.53
LAPTM4A-202ENST00000483117 HSF5Q4G112 596 aaPredicted RBP5.52□□□□□ -1.53
LAPTM4A-202ENST00000483117 ZNF394Q53GI3 561 aa5.52□□□□□ -1.53
LAPTM4A-202ENST00000483117 CRTC3Q6UUV7 619 aa5.52□□□□□ -1.53
LAPTM4A-202ENST00000483117 CDADC1Q9BWV3 514 aa5.52□□□□□ -1.53
LAPTM4A-202ENST00000483117 ERVK13-1Q9NX77 482 aa5.52□□□□□ -1.53
LAPTM4A-202ENST00000483117 TNFRSF10DQ9UBN6 386 aa5.52□□□□□ -1.53
LAPTM4A-202ENST00000483117 MBD1Q9UIS9 605 aaPredicted RBP5.52□□□□□ -1.53
LAPTM4A-202ENST00000483117 ZNRF3Q9ULT6 936 aa5.52□□□□□ -1.53
LAPTM4A-202ENST00000483117 KCTD3Q9Y597 815 aa5.52□□□□□ -1.53
LAPTM4A-202ENST00000483117 PCDHGB7Q9Y5F8 929 aa5.52□□□□□ -1.53
LAPTM4A-202ENST00000483117 ZNF205O95201 554 aa5.51□□□□□ -1.53
LAPTM4A-202ENST00000483117 PNLIPP16233 465 aa5.51□□□□□ -1.53
LAPTM4A-202ENST00000483117 VIPR1P32241 457 aa5.51□□□□□ -1.53
LAPTM4A-202ENST00000483117 BMP8BP34820 402 aa5.51□□□□□ -1.53
LAPTM4A-202ENST00000483117 ZNF76P36508 570 aa5.51□□□□□ -1.53
LAPTM4A-202ENST00000483117 CEBPAP49715 358 aaPredicted RBP5.51□□□□□ -1.53
LAPTM4A-202ENST00000483117 TDRD10Q5VZ19 366 aaKnown RBP5.51□□□□□ -1.53
LAPTM4A-202ENST00000483117 USP48Q86UV5 1035 aa5.51□□□□□ -1.53
LAPTM4A-202ENST00000483117 C7orf61Q8IZ16 206 aa5.51□□□□□ -1.53
LAPTM4A-202ENST00000483117 BACH2Q9BYV9 841 aa5.51□□□□□ -1.53
LAPTM4A-202ENST00000483117 AP5S1Q9NUS5 200 aa5.51□□□□□ -1.53
LAPTM4A-202ENST00000483117 SIRT5Q9NXA8 310 aa5.51□□□□□ -1.53
LAPTM4A-202ENST00000483117 SUCOQ9UBS9 1254 aaKnown RBP5.51□□□□□ -1.53
LAPTM4A-202ENST00000483117 SHOXO15266 292 aa5.5□□□□□ -1.53
LAPTM4A-202ENST00000483117 VAV1P15498 845 aa5.5□□□□□ -1.53
LAPTM4A-202ENST00000483117 PI3P19957 117 aa5.5□□□□□ -1.53
LAPTM4A-202ENST00000483117 EPHB3P54753 998 aa5.5□□□□□ -1.53
LAPTM4A-202ENST00000483117 FANCCQ00597 558 aa5.5□□□□□ -1.53
LAPTM4A-202ENST00000483117 GALNT18Q6P9A2 607 aa5.5□□□□□ -1.53
LAPTM4A-202ENST00000483117 SLCO6A1Q86UG4 719 aa5.5□□□□□ -1.53
LAPTM4A-202ENST00000483117 PPFIBP1Q86W92 1011 aa5.5□□□□□ -1.53
LAPTM4A-202ENST00000483117 CCDC144CPQ8IYA2 1237 aa5.5□□□□□ -1.53
LAPTM4A-202ENST00000483117 PANK1Q8TE04 598 aa5.5□□□□□ -1.53
LAPTM4A-202ENST00000483117 DSCC1Q9BVC3 393 aa5.5□□□□□ -1.53
LAPTM4A-202ENST00000483117 CNTD2Q9H8S5 307 aa5.5□□□□□ -1.53
LAPTM4A-202ENST00000483117 TAF6LQ9Y6J9 622 aa5.5□□□□□ -1.53
LAPTM4A-202ENST00000483117 ADAMTS20P59510 1910 aa5.5□□□□□ -1.53
LAPTM4A-202ENST00000483117 WTIPA6NIX2 430 aaPredicted RBP5.49□□□□□ -1.53
LAPTM4A-202ENST00000483117 PRKCAP17252 672 aa5.49□□□□□ -1.53
LAPTM4A-202ENST00000483117 BMP7P18075 431 aa5.49□□□□□ -1.53
LAPTM4A-202ENST00000483117 ERVFRD-1P60508 538 aa5.49□□□□□ -1.53
LAPTM4A-202ENST00000483117 ZNF385BQ569K4 471 aa5.49□□□□□ -1.53
LAPTM4A-202ENST00000483117 RTP2Q5QGT7 225 aa5.49□□□□□ -1.53
LAPTM4A-202ENST00000483117 TMCO4Q5TGY1 634 aa5.49□□□□□ -1.53
LAPTM4A-202ENST00000483117 DCAF15Q66K64 600 aa5.49□□□□□ -1.53
LAPTM4A-202ENST00000483117 INTS3Q68E01 1043 aaKnown RBP5.49□□□□□ -1.53
LAPTM4A-202ENST00000483117 RUFY4Q6ZNE9 571 aa5.49□□□□□ -1.53
LAPTM4A-202ENST00000483117 TMEM52Q8NDY8 209 aa5.49□□□□□ -1.53
LAPTM4A-202ENST00000483117 NUP43Q8NFH3 380 aa5.49□□□□□ -1.53
LAPTM4A-202ENST00000483117 DHRS1Q96LJ7 313 aa5.49□□□□□ -1.53
LAPTM4A-202ENST00000483117 FERD3LQ96RJ6 166 aa5.49□□□□□ -1.53
LAPTM4A-202ENST00000483117 FAM86C1Q9NVL1 165 aa5.49□□□□□ -1.53
LAPTM4A-202ENST00000483117 H0Y8X5 98 aa5.48□□□□□ -1.53
LAPTM4A-202ENST00000483117 HRKO00198 91 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms