RNA–Protein interactions for RNA: ENST00000482987.1

EPHB3-203, Transcript of EPH receptor B3, humanhuman

TSL 3

Gene EPHB3, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-203ENST00000482987 ERC2O15083 957 aa13.71□□□□□ -0.21
EPHB3-203ENST00000482987 RARBP10826 455 aa13.71□□□□□ -0.21
EPHB3-203ENST00000482987 COPB2P35606 906 aa13.71□□□□□ -0.21
EPHB3-203ENST00000482987 SH3RF1Q7Z6J0 888 aa13.71□□□□□ -0.21
EPHB3-203ENST00000482987 ZNF444Q8N0Y2 327 aaPredicted RBP13.71□□□□□ -0.21
EPHB3-203ENST00000482987 GMCL1P1Q8NEA9 526 aa13.71□□□□□ -0.21
EPHB3-203ENST00000482987 LBHD1Q9BQE6 289 aaPredicted RBP13.71□□□□□ -0.21
EPHB3-203ENST00000482987 FSD1Q9BTV5 496 aa13.71□□□□□ -0.21
EPHB3-203ENST00000482987 SLC38A10Q9HBR0 1119 aa13.71□□□□□ -0.21
EPHB3-203ENST00000482987 PDLIM7Q9NR12 457 aa13.71□□□□□ -0.21
EPHB3-203ENST00000482987 MTMR10Q9NXD2 777 aa13.71□□□□□ -0.21
EPHB3-203ENST00000482987 PHF24Q9UPV7 400 aa13.71□□□□□ -0.21
EPHB3-203ENST00000482987 COL11A1P12107 1806 aaPredicted RBP13.7□□□□□ -0.22
EPHB3-203ENST00000482987 TRIM43BA6NCK2 446 aa13.7□□□□□ -0.22
EPHB3-203ENST00000482987 ADAMTS4O75173 837 aa13.7□□□□□ -0.22
EPHB3-203ENST00000482987 SNAI1O95863 264 aaPredicted RBP13.7□□□□□ -0.22
EPHB3-203ENST00000482987 TTLL1O95922 423 aa13.7□□□□□ -0.22
EPHB3-203ENST00000482987 MX1P20591 662 aa13.7□□□□□ -0.22
EPHB3-203ENST00000482987 PPARAQ07869 468 aa13.7□□□□□ -0.22
EPHB3-203ENST00000482987 C1orf53Q5VUE5 145 aa13.7□□□□□ -0.22
EPHB3-203ENST00000482987 CCDC129Q6ZRS4 1044 aa13.7□□□□□ -0.22
EPHB3-203ENST00000482987 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.7□□□□□ -0.22
EPHB3-203ENST00000482987 CPXCR1Q8N123 301 aa13.7□□□□□ -0.22
EPHB3-203ENST00000482987 NEDD1Q8NHV4 660 aa13.7□□□□□ -0.22
EPHB3-203ENST00000482987 KIFC2Q96AC6 838 aa13.7□□□□□ -0.22
EPHB3-203ENST00000482987 TRIM43Q96BQ3 446 aaPredicted RBP13.7□□□□□ -0.22
EPHB3-203ENST00000482987 FGD4Q96M96 766 aa13.7□□□□□ -0.22
EPHB3-203ENST00000482987 RAVER2Q9HCJ3 691 aaKnown RBP13.7□□□□□ -0.22
EPHB3-203ENST00000482987 SYNPO2Q9UMS6 1093 aa13.7□□□□□ -0.22
EPHB3-203ENST00000482987 TACC3Q9Y6A5 838 aa13.7□□□□□ -0.22
EPHB3-203ENST00000482987 AKR1A1P14550 325 aa13.69□□□□□ -0.22
EPHB3-203ENST00000482987 ITGB8P26012 769 aa13.69□□□□□ -0.22
EPHB3-203ENST00000482987 RRP1P56182 461 aaKnown RBP13.69□□□□□ -0.22
EPHB3-203ENST00000482987 TFAP4Q01664 338 aa13.69□□□□□ -0.22
EPHB3-203ENST00000482987 TLE2Q04725 743 aa13.69□□□□□ -0.22
EPHB3-203ENST00000482987 LRRFIP1Q32MZ4 808 aaKnown RBP13.69□□□□□ -0.22
EPHB3-203ENST00000482987 C9orf50Q5SZB4 431 aa13.69□□□□□ -0.22
EPHB3-203ENST00000482987 MAMDC4Q6UXC1 1216 aa13.69□□□□□ -0.22
EPHB3-203ENST00000482987 BADQ92934 168 aa13.69□□□□□ -0.22
EPHB3-203ENST00000482987 NACAP1Q9BZK3 213 aa13.69□□□□□ -0.22
EPHB3-203ENST00000482987 NAPBQ9H115 298 aa13.69□□□□□ -0.22
EPHB3-203ENST00000482987 ZNF287Q9HBT7 754 aa13.69□□□□□ -0.22
EPHB3-203ENST00000482987 INCENPQ9NQS7 918 aa13.69□□□□□ -0.22
EPHB3-203ENST00000482987 PRDM5Q9NQX1 630 aaPredicted RBP13.69□□□□□ -0.22
EPHB3-203ENST00000482987 PRKAG2Q9UGJ0 569 aa13.69□□□□□ -0.22
EPHB3-203ENST00000482987 FEM1BQ9UK73 627 aa13.69□□□□□ -0.22
EPHB3-203ENST00000482987 SYNGAP1Q96PV0 1343 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 VCANP13611 3396 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 A0A1W2PQ45 241 aaPredicted RBP13.68□□□□□ -0.22
EPHB3-203ENST00000482987 A0A1W2PQY0 241 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 POTEB2H3BUK9 544 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 DLL1O00548 723 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 ADCY6O43306 1168 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 ZBED4O75132 1171 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 TSPY3P0CV98 308 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 TSPY8P0CW00 308 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 SLC4A3P48751 1232 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 IRX5P78411 483 aaPredicted RBP13.68□□□□□ -0.22
EPHB3-203ENST00000482987 VPS53Q5VIR6 699 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 SLFN13Q68D06 897 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 RASGRP2Q7LDG7 609 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 RNF180Q86T96 592 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 MSL3Q8N5Y2 521 aaKnown RBP13.68□□□□□ -0.22
EPHB3-203ENST00000482987 SLC17A8Q8NDX2 589 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 DDX11Q96FC9 970 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 CNPY2Q9Y2B0 182 aa13.68□□□□□ -0.22
EPHB3-203ENST00000482987 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.68□□□□□ -0.22
EPHB3-203ENST00000482987 ZNF536O15090 1300 aa13.67□□□□□ -0.22
EPHB3-203ENST00000482987 SYNRGQ9UMZ2 1314 aa13.67□□□□□ -0.22
EPHB3-203ENST00000482987 MYADML2A6NDP7 307 aa13.67□□□□□ -0.22
EPHB3-203ENST00000482987 NMT2O60551 498 aa13.67□□□□□ -0.22
EPHB3-203ENST00000482987 BMP3P12645 472 aa13.67□□□□□ -0.22
EPHB3-203ENST00000482987 CTDSPL2Q05D32 466 aa13.67□□□□□ -0.22
EPHB3-203ENST00000482987 PDE4BQ07343 736 aa13.67□□□□□ -0.22
EPHB3-203ENST00000482987 SHHQ15465 462 aa13.67□□□□□ -0.22
EPHB3-203ENST00000482987 CCSAPQ6IQ19 270 aaPredicted RBP13.67□□□□□ -0.22
EPHB3-203ENST00000482987 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
EPHB3-203ENST00000482987 KLHDC9Q8NEP7 349 aa13.67□□□□□ -0.22
EPHB3-203ENST00000482987 CHMP4CQ96CF2 233 aa13.67□□□□□ -0.22
EPHB3-203ENST00000482987 CRBNQ96SW2 442 aa13.67□□□□□ -0.22
EPHB3-203ENST00000482987 IL17RBQ9NRM6 502 aa13.67□□□□□ -0.22
EPHB3-203ENST00000482987 ZHX1Q9UKY1 873 aaPredicted RBP13.67□□□□□ -0.22
EPHB3-203ENST00000482987 STXBP5LQ9Y2K9 1186 aa13.67□□□□□ -0.22
EPHB3-203ENST00000482987 LTBP2Q14767 1821 aa13.67□□□□□ -0.22
EPHB3-203ENST00000482987 EYSQ5T1H1 3165 aa13.66□□□□□ -0.22
EPHB3-203ENST00000482987 TMEM232C9JQI7 657 aa13.66□□□□□ -0.22
EPHB3-203ENST00000482987 OAZ1P54368 228 aa13.66□□□□□ -0.22
EPHB3-203ENST00000482987 ANKRD45Q5TZF3 282 aa13.66□□□□□ -0.22
EPHB3-203ENST00000482987 ANKRD35Q8N283 1001 aa13.66□□□□□ -0.22
EPHB3-203ENST00000482987 CHST13Q8NET6 341 aa13.66□□□□□ -0.22
EPHB3-203ENST00000482987 GMCL1Q96IK5 515 aa13.66□□□□□ -0.22
EPHB3-203ENST00000482987 GUCD1Q96NT3 240 aa13.66□□□□□ -0.22
EPHB3-203ENST00000482987 HOMER2Q9NSB8 354 aa13.66□□□□□ -0.22
EPHB3-203ENST00000482987 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.66□□□□□ -0.22
EPHB3-203ENST00000482987 FAM184BQ9ULE4 1060 aa13.66□□□□□ -0.22
EPHB3-203ENST00000482987 SPTBN5Q9NRC6 3674 aaKnown RBP13.66□□□□□ -0.22
EPHB3-203ENST00000482987 CDH23Q9H251 3354 aa13.66□□□□□ -0.22
EPHB3-203ENST00000482987 PQBP1O60828 265 aaKnown RBP13.65□□□□□ -0.22
EPHB3-203ENST00000482987 SLC3A2P08195 630 aaKnown RBP13.65□□□□□ -0.22
EPHB3-203ENST00000482987 MCCP23508 829 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms