RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 ATP5JP18859 108 aa15.4■□□□□ 0.06
TMEM54-206ENST00000482771 RPAP2Q8IXW5 612 aaPredicted RBP15.4■□□□□ 0.06
TMEM54-206ENST00000482771 MSL3Q8N5Y2 521 aaKnown RBP15.4■□□□□ 0.06
TMEM54-206ENST00000482771 SLF1Q9BQI6 1058 aa15.4■□□□□ 0.06
TMEM54-206ENST00000482771 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.4■□□□□ 0.06
TMEM54-206ENST00000482771 ZHX1Q9UKY1 873 aaPredicted RBP15.4■□□□□ 0.06
TMEM54-206ENST00000482771 SYNRGQ9UMZ2 1314 aa15.4■□□□□ 0.06
TMEM54-206ENST00000482771 MOXD2PA6NHM9 499 aa15.39■□□□□ 0.05
TMEM54-206ENST00000482771 RAB11FIP3O75154 756 aa15.39■□□□□ 0.05
TMEM54-206ENST00000482771 HMMRO75330 724 aa15.39■□□□□ 0.05
TMEM54-206ENST00000482771 IRX5P78411 483 aaPredicted RBP15.39■□□□□ 0.05
TMEM54-206ENST00000482771 UBE3CQ15386 1083 aa15.39■□□□□ 0.05
TMEM54-206ENST00000482771 SNRNP48Q6IEG0 339 aaKnown RBP15.39■□□□□ 0.05
TMEM54-206ENST00000482771 CCSAPQ6IQ19 270 aaPredicted RBP15.39■□□□□ 0.05
TMEM54-206ENST00000482771 MFSD5Q6N075 450 aa15.39■□□□□ 0.05
TMEM54-206ENST00000482771 C16orf59Q7L2K0 433 aa15.39■□□□□ 0.05
TMEM54-206ENST00000482771 SIRT2Q8IXJ6 389 aa15.39■□□□□ 0.05
TMEM54-206ENST00000482771 CPXCR1Q8N123 301 aa15.39■□□□□ 0.05
TMEM54-206ENST00000482771 STK11IPQ8N1F8 1099 aa15.39■□□□□ 0.05
TMEM54-206ENST00000482771 USP38Q8NB14 1042 aa15.39■□□□□ 0.05
TMEM54-206ENST00000482771 TIFAQ96CG3 184 aa15.39■□□□□ 0.05
TMEM54-206ENST00000482771 HAUS7Q99871 368 aa15.39■□□□□ 0.05
TMEM54-206ENST00000482771 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.39■□□□□ 0.05
TMEM54-206ENST00000482771 TEX13BQ9BXU2 312 aa15.39■□□□□ 0.05
TMEM54-206ENST00000482771 NAV1Q8NEY1 1877 aa15.38■□□□□ 0.05
TMEM54-206ENST00000482771 MYADML2A6NDP7 307 aa15.38■□□□□ 0.05
TMEM54-206ENST00000482771 GRXCR1A8MXD5 290 aa15.38■□□□□ 0.05
TMEM54-206ENST00000482771 F5H6K3 240 aa15.38■□□□□ 0.05
TMEM54-206ENST00000482771 DUSP11O75319 330 aaKnown RBP15.38■□□□□ 0.05
TMEM54-206ENST00000482771 CDK7P50613 346 aa15.38■□□□□ 0.05
TMEM54-206ENST00000482771 HNRNPUQ00839 825 aaKnown RBP eCLIP15.38■□□□□ 0.05
TMEM54-206ENST00000482771 KLRC3Q07444 240 aa15.38■□□□□ 0.05
TMEM54-206ENST00000482771 MAMDC4Q6UXC1 1216 aa15.38■□□□□ 0.05
TMEM54-206ENST00000482771 PRPF38AQ8NAV1 312 aaKnown RBP15.38■□□□□ 0.05
TMEM54-206ENST00000482771 PPM1EQ8WY54 764 aa15.38■□□□□ 0.05
TMEM54-206ENST00000482771 GLT1D1Q96MS3 346 aa15.38■□□□□ 0.05
TMEM54-206ENST00000482771 PUS7LQ9H0K6 701 aaKnown RBP15.38■□□□□ 0.05
TMEM54-206ENST00000482771 CTDP1Q9Y5B0 961 aaPredicted RBP15.38■□□□□ 0.05
TMEM54-206ENST00000482771 ELP1O95163 1332 aa15.38■□□□□ 0.05
TMEM54-206ENST00000482771 SYNGAP1Q96PV0 1343 aa15.38■□□□□ 0.05
TMEM54-206ENST00000482771 DNAJC25-GNG10A0A024R161 153 aa15.37■□□□□ 0.05
TMEM54-206ENST00000482771 ZBED4O75132 1171 aa15.37■□□□□ 0.05
TMEM54-206ENST00000482771 C6orf222P0C671 652 aaPredicted RBP15.37■□□□□ 0.05
TMEM54-206ENST00000482771 PPIGQ13427 754 aaKnown RBP eCLIP15.37■□□□□ 0.05
TMEM54-206ENST00000482771 ACVR2BQ13705 512 aa15.37■□□□□ 0.05
TMEM54-206ENST00000482771 TJAP1Q5JTD0 557 aa15.37■□□□□ 0.05
TMEM54-206ENST00000482771 GNASQ5JWF2 1037 aa15.37■□□□□ 0.05
TMEM54-206ENST00000482771 TMEM240Q5SV17 173 aa15.37■□□□□ 0.05
TMEM54-206ENST00000482771 CCDC129Q6ZRS4 1044 aa15.37■□□□□ 0.05
TMEM54-206ENST00000482771 PCSK9Q8NBP7 692 aaKnown RBP15.37■□□□□ 0.05
TMEM54-206ENST00000482771 MKNK2Q9HBH9 465 aa15.37■□□□□ 0.05
TMEM54-206ENST00000482771 SPC25Q9HBM1 224 aa15.37■□□□□ 0.05
TMEM54-206ENST00000482771 CLIP2Q9UDT6 1046 aa15.37■□□□□ 0.05
TMEM54-206ENST00000482771 TBX21Q9UL17 535 aa15.37■□□□□ 0.05
TMEM54-206ENST00000482771 A0A0G2JMZ2 1700 aa15.37■□□□□ 0.05
TMEM54-206ENST00000482771 NCOR1O75376 2440 aa15.36■□□□□ 0.05
TMEM54-206ENST00000482771 NDUFB10O96000 172 aa15.36■□□□□ 0.05
TMEM54-206ENST00000482771 ASGR1P07306 291 aa15.36■□□□□ 0.05
TMEM54-206ENST00000482771 ACRP10323 421 aa15.36■□□□□ 0.05
TMEM54-206ENST00000482771 CSF2RAP15509 400 aa15.36■□□□□ 0.05
TMEM54-206ENST00000482771 PBX2P40425 430 aa15.36■□□□□ 0.05
TMEM54-206ENST00000482771 CCDC144BQ3MJ40 725 aa15.36■□□□□ 0.05
TMEM54-206ENST00000482771 ZSCAN25Q6NSZ9 544 aa15.36■□□□□ 0.05
TMEM54-206ENST00000482771 CCDC174Q6PII3 467 aa15.36■□□□□ 0.05
TMEM54-206ENST00000482771 ANKRD35Q8N283 1001 aa15.36■□□□□ 0.05
TMEM54-206ENST00000482771 KIFC2Q96AC6 838 aa15.36■□□□□ 0.05
TMEM54-206ENST00000482771 RAVER2Q9HCJ3 691 aaKnown RBP15.36■□□□□ 0.05
TMEM54-206ENST00000482771 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.36■□□□□ 0.05
TMEM54-206ENST00000482771 NYAP2Q9P242 653 aa15.36■□□□□ 0.05
TMEM54-206ENST00000482771 BAZ2AQ9UIF9 1905 aaKnown RBP15.35■□□□□ 0.05
TMEM54-206ENST00000482771 MINDY4BA8MYZ0 360 aa15.35■□□□□ 0.05
TMEM54-206ENST00000482771 ARVCFO00192 962 aa15.35■□□□□ 0.05
TMEM54-206ENST00000482771 TNFRSF10AO00220 468 aa15.35■□□□□ 0.05
TMEM54-206ENST00000482771 ADCY6O43306 1168 aa15.35■□□□□ 0.05
TMEM54-206ENST00000482771 RASA1P20936 1047 aa15.35■□□□□ 0.05
TMEM54-206ENST00000482771 ZNF365Q70YC5 407 aa15.35■□□□□ 0.05
TMEM54-206ENST00000482771 ZNF467Q7Z7K2 595 aaPredicted RBP15.35■□□□□ 0.05
TMEM54-206ENST00000482771 TMEM199Q8N511 208 aa15.35■□□□□ 0.05
TMEM54-206ENST00000482771 STRBPQ96SI9 672 aaKnown RBP15.35■□□□□ 0.05
TMEM54-206ENST00000482771 GAS2L1Q99501 681 aaPredicted RBP15.35■□□□□ 0.05
TMEM54-206ENST00000482771 PBX4Q9BYU1 374 aa15.35■□□□□ 0.05
TMEM54-206ENST00000482771 PPP1R12CQ9BZL4 782 aa15.35■□□□□ 0.05
TMEM54-206ENST00000482771 ABHD16BQ9H3Z7 469 aa15.35■□□□□ 0.05
TMEM54-206ENST00000482771 PRDM12Q9H4Q4 367 aa15.35■□□□□ 0.05
TMEM54-206ENST00000482771 ZBTB40Q9NUA8 1239 aa15.35■□□□□ 0.05
TMEM54-206ENST00000482771 MROH7Q68CQ1 1323 aa15.35■□□□□ 0.05
TMEM54-206ENST00000482771 ZBED9Q6R2W3 1325 aa15.35■□□□□ 0.05
TMEM54-206ENST00000482771 ROBO3Q96MS0 1386 aa15.35■□□□□ 0.05
TMEM54-206ENST00000482771 COL11A1P12107 1806 aaPredicted RBP15.34■□□□□ 0.05
TMEM54-206ENST00000482771 A0A0U1RQG5 324 aaPredicted RBP15.34■□□□□ 0.05
TMEM54-206ENST00000482771 ATP2A1O14983 1001 aa15.34■□□□□ 0.05
TMEM54-206ENST00000482771 MS4A1P11836 297 aa15.34■□□□□ 0.05
TMEM54-206ENST00000482771 CST5P28325 142 aaPredicted RBP15.34■□□□□ 0.05
TMEM54-206ENST00000482771 GJA9P57773 515 aa15.34■□□□□ 0.05
TMEM54-206ENST00000482771 SBK1Q52WX2 424 aa15.34■□□□□ 0.05
TMEM54-206ENST00000482771 ZNF444Q8N0Y2 327 aaPredicted RBP15.34■□□□□ 0.05
TMEM54-206ENST00000482771 ARPP21Q9UBL0 812 aaPredicted RBP15.34■□□□□ 0.05
TMEM54-206ENST00000482771 COG6Q9Y2V7 657 aa15.34■□□□□ 0.05
TMEM54-206ENST00000482771 GSG1L2A8MUP6 293 aa15.33■□□□□ 0.04
TMEM54-206ENST00000482771 CYP2C18P33260 490 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms