RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 ZNF236Q9UL36 1845 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 RPTORQ8N122 1335 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 TFRCP02786 760 aaKnown RBP11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 HAND2P61296 217 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 TMEM132BQ14DG7 1078 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 RRP12Q5JTH9 1297 aaKnown RBP11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 PRPF38BQ5VTL8 546 aaKnown RBP11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 CHMP4CQ96CF2 233 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 GBP4Q96PP9 640 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 C22orf23Q9BZE7 217 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 STX8Q9UNK0 236 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 LAMA4Q16363 1823 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 HIP1O00291 1037 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 FARP2O94887 1054 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 SHCBP1Q8NEM2 672 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 MKL1Q969V6 931 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 SLF1Q9BQI6 1058 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 TACC3Q9Y6A5 838 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 ZMYM6O95789 1325 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 VWA5AO00534 786 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 NMT2O60551 498 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 OFD1O75665 1012 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 ADORA2AP29274 412 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 DDIT3P35638 169 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 CACNB2Q08289 660 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 TTC22Q5TAA0 569 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 SLFN13Q68D06 897 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 DPP9Q86TI2 863 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 ZSCAN30Q86W11 494 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 PPP1R9BQ96SB3 815 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 MROH8Q9H579 483 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 ADAMTS5Q9UNA0 930 aa11.83□□□□□ -0.52
HLA-DQA1-206ENST00000482745 ORC4O43929 436 aa11.82□□□□□ -0.52
HLA-DQA1-206ENST00000482745 GSPT1P15170 499 aaKnown RBP11.82□□□□□ -0.52
HLA-DQA1-206ENST00000482745 MAP3K21Q5TCX8 1036 aa11.82□□□□□ -0.52
HLA-DQA1-206ENST00000482745 GMCL1P1Q8NEA9 526 aa11.82□□□□□ -0.52
HLA-DQA1-206ENST00000482745 NPLOC4Q8TAT6 608 aa11.82□□□□□ -0.52
HLA-DQA1-206ENST00000482745 KIFC2Q96AC6 838 aa11.82□□□□□ -0.52
HLA-DQA1-206ENST00000482745 FLRT1Q9NZU1 646 aa11.82□□□□□ -0.52
HLA-DQA1-206ENST00000482745 SYNPO2Q9UMS6 1093 aa11.82□□□□□ -0.52
HLA-DQA1-206ENST00000482745 MTMR7Q9Y216 660 aa11.82□□□□□ -0.52
HLA-DQA1-206ENST00000482745 ZNFX1Q9P2E3 1918 aaKnown RBP11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 STRNO43815 780 aa11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 SLC25A27O95847 323 aa11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 HOXC6P09630 235 aa11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 STAT3P40763 770 aa11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 PPP4R3BQ5MIZ7 849 aa11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 MFSD14CQ5VZR4 134 aa11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 PRPF38AQ8NAV1 312 aaKnown RBP11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 SPRYD3Q8NCJ5 442 aa11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 ANP32BQ92688 251 aaKnown RBP11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 IL17RBQ9NRM6 502 aa11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 ZNF214Q9UL59 606 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 CTDP1Q9Y5B0 961 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 FRMPD3Q5JV73 1810 aa11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 BMP3P12645 472 aa11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 CCND3P30281 292 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 IKQ13123 557 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 SNRNP48Q6IEG0 339 aaKnown RBP11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 MTERF4Q7Z6M4 381 aaKnown RBP11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 RIOX2Q8IUF8 465 aa11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 TBC1D10CQ8IV04 446 aa11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 REPS2Q8NFH8 660 aa11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 CRISPLD2Q9H0B8 497 aa11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 PRDM4Q9UKN5 801 aa11.81□□□□□ -0.52
HLA-DQA1-206ENST00000482745 PLXNA1Q9UIW2 1896 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 TMEM232C9JQI7 657 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 FGRP09769 529 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 FCER1AP12319 257 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 CYP2C19P33261 490 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 SLC1A4P43007 532 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 AKNAD1Q5T1N1 836 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 MFSD6Q6ZSS7 791 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 UBE2Q1Q7Z7E8 422 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 CPXCR1Q8N123 301 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 SNX21Q969T3 373 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 MMP19Q99542 508 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 NBPF3Q9H094 633 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 FEM1BQ9UK73 627 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 ZNF213O14771 459 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 COBLO75128 1261 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 ZBED4O75132 1171 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 MCCP23508 829 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 MSNP26038 577 aaKnown RBP11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 HS1BP3Q53T59 392 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 RASGRP2Q7LDG7 609 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 DPF3Q92784 378 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 TEX13BQ9BXU2 312 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 SLC5A4Q9NY91 659 aa11.8□□□□□ -0.52
HLA-DQA1-206ENST00000482745 CNGA1P29973 690 aa11.79□□□□□ -0.52
HLA-DQA1-206ENST00000482745 COPB2P35606 906 aa11.79□□□□□ -0.52
HLA-DQA1-206ENST00000482745 STAT2P52630 851 aa11.79□□□□□ -0.52
HLA-DQA1-206ENST00000482745 KCTD2Q14681 263 aa11.79□□□□□ -0.52
HLA-DQA1-206ENST00000482745 KCTD1Q719H9 257 aa11.79□□□□□ -0.52
HLA-DQA1-206ENST00000482745 ABRAQ8N0Z2 381 aa11.79□□□□□ -0.52
HLA-DQA1-206ENST00000482745 DIS3LQ8TF46 1054 aaKnown RBP11.79□□□□□ -0.52
HLA-DQA1-206ENST00000482745 STAG1Q8WVM7 1258 aa11.79□□□□□ -0.52
HLA-DQA1-206ENST00000482745 GMCL1Q96IK5 515 aa11.79□□□□□ -0.52
HLA-DQA1-206ENST00000482745 PAWRQ96IZ0 340 aaKnown RBP11.79□□□□□ -0.52
HLA-DQA1-206ENST00000482745 HTATIP2Q9BUP3 242 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms