RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 DISC1Q9NRI5 854 aa17.32■□□□□ 0.36
C9orf3-218ENST00000482056 MYO1AQ9UBC5 1043 aa17.32■□□□□ 0.36
C9orf3-218ENST00000482056 CTAGE9A4FU28 777 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 BAG3O95817 575 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 LDHBP07195 334 aaKnown RBP17.31■□□□□ 0.36
C9orf3-218ENST00000482056 FXR1P51114 621 aaKnown RBP eCLIP17.31■□□□□ 0.36
C9orf3-218ENST00000482056 EVX2Q03828 476 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 SRGAP1Q7Z6B7 1085 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 C4orf32Q8N8J7 132 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 LZTS2Q9BRK4 669 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 ABHD10Q9NUJ1 306 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 MYH8P13535 1937 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 KDM4FA0A1W2PPD8 638 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 USP17L8P0C7I0 530 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 CHMP4BP1P59074 171 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 ZNF569Q5MCW4 686 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 TAF3Q5VWG9 929 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 CC2D1AQ6P1N0 951 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-218ENST00000482056 GPKOWQ92917 476 aaPredicted RBP eCLIP17.31■□□□□ 0.36
C9orf3-218ENST00000482056 MTRQ99707 1265 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 ZNF287Q9HBT7 754 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 TCP11L1Q9NUJ3 509 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 TAB2Q9NYJ8 693 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 CDC23Q9UJX2 597 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 ROBO3Q96MS0 1386 aa17.31■□□□□ 0.36
C9orf3-218ENST00000482056 RPS6KA4O75676 772 aa17.3■□□□□ 0.36
C9orf3-218ENST00000482056 TSPY3P0CV98 308 aa17.3■□□□□ 0.36
C9orf3-218ENST00000482056 TSPY8P0CW00 308 aa17.3■□□□□ 0.36
C9orf3-218ENST00000482056 UBA7P41226 1012 aa17.3■□□□□ 0.36
C9orf3-218ENST00000482056 KCNB1Q14721 858 aa17.3■□□□□ 0.36
C9orf3-218ENST00000482056 KIF4BQ2VIQ3 1234 aa17.3■□□□□ 0.36
C9orf3-218ENST00000482056 ZNF444Q8N0Y2 327 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-218ENST00000482056 CCDC47Q96A33 483 aaKnown RBP17.3■□□□□ 0.36
C9orf3-218ENST00000482056 PRCPP42785 496 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 PLA2G4AP47712 749 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 UBXN1Q04323 297 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 BRD3Q15059 726 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 TSR1Q2NL82 804 aaKnown RBP17.29■□□□□ 0.36
C9orf3-218ENST00000482056 ADSSL1Q8N142 457 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 NOC3LQ8WTT2 800 aaKnown RBP17.29■□□□□ 0.36
C9orf3-218ENST00000482056 PARD6BQ9BYG5 372 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 CUEDC2Q9H467 287 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 MAGEF1Q9HAY2 307 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 MAGEC2Q9UBF1 373 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-218ENST00000482056 PSMA7O14818 248 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 LDHCP07864 332 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 EEF1GP26641 437 aaKnown RBP17.29■□□□□ 0.36
C9orf3-218ENST00000482056 PRPHP41219 470 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 HEATR3Q7Z4Q2 680 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 CERS3Q8IU89 383 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 NAPGQ99747 312 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-218ENST00000482056 THAP9Q9H5L6 903 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 IL17RBQ9NRM6 502 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 MAD2L2Q9UI95 211 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 FAM205AQ6ZU69 1335 aa17.29■□□□□ 0.36
C9orf3-218ENST00000482056 CCDC66A2RUB6 948 aa17.28■□□□□ 0.36
C9orf3-218ENST00000482056 NUTM2BA6NNL0 878 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-218ENST00000482056 NUTM2EB1AL46 878 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-218ENST00000482056 VEGFAP15692 232 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-218ENST00000482056 KRT9P35527 623 aa17.28■□□□□ 0.36
C9orf3-218ENST00000482056 IRX2Q9BZI1 471 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-218ENST00000482056 CCSER1Q9C0I3 900 aa17.28■□□□□ 0.36
C9orf3-218ENST00000482056 BARHL2Q9NY43 387 aa17.28■□□□□ 0.36
C9orf3-218ENST00000482056 PCDHA6Q9UN73 950 aa17.28■□□□□ 0.36
C9orf3-218ENST00000482056 GDAQ9Y2T3 454 aa17.28■□□□□ 0.36
C9orf3-218ENST00000482056 LEMD3Q9Y2U8 911 aa17.28■□□□□ 0.36
C9orf3-218ENST00000482056 PCDHA8Q9Y5H6 950 aa17.28■□□□□ 0.36
C9orf3-218ENST00000482056 NAV1Q8NEY1 1877 aa17.28■□□□□ 0.36
C9orf3-218ENST00000482056 A0A1W2PQC6 194 aa17.28■□□□□ 0.36
C9orf3-218ENST00000482056 CCDC151A5D8V7 595 aa17.28■□□□□ 0.36
C9orf3-218ENST00000482056 M0R2N6 131 aa17.28■□□□□ 0.36
C9orf3-218ENST00000482056 SEC31AO94979 1220 aaKnown RBP17.28■□□□□ 0.36
C9orf3-218ENST00000482056 PARP1P09874 1014 aaKnown RBP17.28■□□□□ 0.36
C9orf3-218ENST00000482056 STAG2Q8N3U4 1231 aa17.28■□□□□ 0.36
C9orf3-218ENST00000482056 AK8Q96MA6 479 aa17.28■□□□□ 0.36
C9orf3-218ENST00000482056 ANKIB1Q9P2G1 1089 aa17.28■□□□□ 0.36
C9orf3-218ENST00000482056 MKRN1Q9UHC7 482 aaKnown RBP17.28■□□□□ 0.36
C9orf3-218ENST00000482056 COBLO75128 1261 aa17.27■□□□□ 0.36
C9orf3-218ENST00000482056 ERVK-24P63145 666 aa17.27■□□□□ 0.36
C9orf3-218ENST00000482056 WHAMMP3Q1A5X7 153 aa17.27■□□□□ 0.36
C9orf3-218ENST00000482056 SLC4A8Q2Y0W8 1093 aa17.27■□□□□ 0.36
C9orf3-218ENST00000482056 ZNF804AQ7Z570 1209 aa17.27■□□□□ 0.36
C9orf3-218ENST00000482056 ACRBPQ8NEB7 543 aa17.27■□□□□ 0.36
C9orf3-218ENST00000482056 RASGRP4Q8TDF6 673 aa17.27■□□□□ 0.36
C9orf3-218ENST00000482056 SH3RF3Q8TEJ3 882 aaPredicted RBP17.27■□□□□ 0.36
C9orf3-218ENST00000482056 LGALS16A8MUM7 142 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 STXBP3O00186 592 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 ADAMTS3O15072 1205 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 ERLIN1O75477 346 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 RHOBTB3O94955 611 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 TBC1D8O95759 1140 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 PPP1R2P41236 205 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 PPP4CP60510 307 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 PIP4K2BP78356 416 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 INF2Q27J81 1249 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 KRT25Q7Z3Z0 450 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 SLC35F6Q8N357 371 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 MB21D1Q8N884 522 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 DYNLL2Q96FJ2 89 aa17.26■□□□□ 0.35
C9orf3-218ENST00000482056 TRIM47Q96LD4 638 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms