RNA–Protein interactions for RNA: ENST00000482019.1

LINC02004-201, Transcript of long intergenic non-protein coding RNA 2004, humanhuman

TSL 2 BASIC

Gene LINC02004, Length 294 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02004-201ENST00000482019 DEFB118Q96PH6 123 aa12.16□□□□□ -0.46
LINC02004-201ENST00000482019 CRISPLD2Q9H0B8 497 aa12.16□□□□□ -0.46
LINC02004-201ENST00000482019 IL25Q9H293 177 aa12.16□□□□□ -0.46
LINC02004-201ENST00000482019 CTDP1Q9Y5B0 961 aaPredicted RBP12.16□□□□□ -0.46
LINC02004-201ENST00000482019 NEDD4P46934 1319 aa12.15□□□□□ -0.46
LINC02004-201ENST00000482019 TOP1P11387 765 aaKnown RBP12.15□□□□□ -0.46
LINC02004-201ENST00000482019 OAZ1P54368 228 aa12.15□□□□□ -0.46
LINC02004-201ENST00000482019 CACNB2Q08289 660 aaPredicted RBP12.15□□□□□ -0.46
LINC02004-201ENST00000482019 OLFML2BQ68BL8 750 aa12.15□□□□□ -0.46
LINC02004-201ENST00000482019 SNRNP48Q6IEG0 339 aaKnown RBP12.15□□□□□ -0.46
LINC02004-201ENST00000482019 NPLOC4Q8TAT6 608 aa12.15□□□□□ -0.46
LINC02004-201ENST00000482019 CHURC1Q8WUH1 139 aa12.15□□□□□ -0.46
LINC02004-201ENST00000482019 DCAF4Q8WV16 495 aa12.15□□□□□ -0.46
LINC02004-201ENST00000482019 MMP19Q99542 508 aa12.15□□□□□ -0.46
LINC02004-201ENST00000482019 SLC38A10Q9HBR0 1119 aa12.15□□□□□ -0.46
LINC02004-201ENST00000482019 ISY1Q9ULR0 285 aaKnown RBP12.15□□□□□ -0.46
LINC02004-201ENST00000482019 COL11A1P12107 1806 aaPredicted RBP12.14□□□□□ -0.47
LINC02004-201ENST00000482019 TNRC18O15417 2968 aaPredicted RBP12.14□□□□□ -0.47
LINC02004-201ENST00000482019 TMEM232C9JQI7 657 aa12.14□□□□□ -0.47
LINC02004-201ENST00000482019 FARP2O94887 1054 aaPredicted RBP12.14□□□□□ -0.47
LINC02004-201ENST00000482019 TFRCP02786 760 aaKnown RBP12.14□□□□□ -0.47
LINC02004-201ENST00000482019 MCCP23508 829 aa12.14□□□□□ -0.47
LINC02004-201ENST00000482019 IKQ13123 557 aaPredicted RBP12.14□□□□□ -0.47
LINC02004-201ENST00000482019 KCTD2Q14681 263 aa12.14□□□□□ -0.47
LINC02004-201ENST00000482019 CCDC178Q5BJE1 867 aa12.14□□□□□ -0.47
LINC02004-201ENST00000482019 RCSD1Q6JBY9 416 aa12.14□□□□□ -0.47
LINC02004-201ENST00000482019 UBE2Q1Q7Z7E8 422 aa12.14□□□□□ -0.47
LINC02004-201ENST00000482019 IQCA1Q86XH1 822 aa12.14□□□□□ -0.47
LINC02004-201ENST00000482019 ANKLE1Q8NAG6 615 aa12.14□□□□□ -0.47
LINC02004-201ENST00000482019 TMEM47Q9BQJ4 181 aa12.14□□□□□ -0.47
LINC02004-201ENST00000482019 CNNM2Q9H8M5 875 aa12.14□□□□□ -0.47
LINC02004-201ENST00000482019 FLRT1Q9NZU1 646 aa12.14□□□□□ -0.47
LINC02004-201ENST00000482019 DOCK3Q8IZD9 2030 aa12.14□□□□□ -0.47
LINC02004-201ENST00000482019 SGSM2O43147 1006 aa12.13□□□□□ -0.47
LINC02004-201ENST00000482019 COBLO75128 1261 aa12.13□□□□□ -0.47
LINC02004-201ENST00000482019 IGHA2P01877 340 aa12.13□□□□□ -0.47
LINC02004-201ENST00000482019 CCDC96Q2M329 555 aa12.13□□□□□ -0.47
LINC02004-201ENST00000482019 PRPF38BQ5VTL8 546 aaKnown RBP12.13□□□□□ -0.47
LINC02004-201ENST00000482019 KCTD1Q719H9 257 aa12.13□□□□□ -0.47
LINC02004-201ENST00000482019 DGKHQ86XP1 1220 aa12.13□□□□□ -0.47
LINC02004-201ENST00000482019 CPXCR1Q8N123 301 aa12.13□□□□□ -0.47
LINC02004-201ENST00000482019 KRT23Q9C075 422 aa12.13□□□□□ -0.47
LINC02004-201ENST00000482019 FBXO40Q9UH90 709 aa12.13□□□□□ -0.47
LINC02004-201ENST00000482019 DIS3Q9Y2L1 958 aaKnown RBP12.13□□□□□ -0.47
LINC02004-201ENST00000482019 U3KPZ7 1027 aaPredicted RBP12.13□□□□□ -0.47
LINC02004-201ENST00000482019 BRCA2P51587 3418 aa12.13□□□□□ -0.47
LINC02004-201ENST00000482019 B4E1Z4 1266 aa12.12□□□□□ -0.47
LINC02004-201ENST00000482019 KDM4AO75164 1064 aa12.12□□□□□ -0.47
LINC02004-201ENST00000482019 CCND3P30281 292 aaPredicted RBP12.12□□□□□ -0.47
LINC02004-201ENST00000482019 BMP2KLQ5H9B9 411 aa12.12□□□□□ -0.47
LINC02004-201ENST00000482019 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.12□□□□□ -0.47
LINC02004-201ENST00000482019 CHST13Q8NET6 341 aa12.12□□□□□ -0.47
LINC02004-201ENST00000482019 MAML3Q96JK9 1138 aa12.12□□□□□ -0.47
LINC02004-201ENST00000482019 CCDC136Q96JN2 1154 aa12.12□□□□□ -0.47
LINC02004-201ENST00000482019 HTATIP2Q9BUP3 242 aa12.12□□□□□ -0.47
LINC02004-201ENST00000482019 RAVER2Q9HCJ3 691 aaKnown RBP12.12□□□□□ -0.47
LINC02004-201ENST00000482019 OGDHLQ9ULD0 1010 aa12.12□□□□□ -0.47
LINC02004-201ENST00000482019 PRR12Q9ULL5 1215 aa12.12□□□□□ -0.47
LINC02004-201ENST00000482019 MTMR7Q9Y216 660 aa12.12□□□□□ -0.47
LINC02004-201ENST00000482019 RIPK3Q9Y572 518 aa12.12□□□□□ -0.47
LINC02004-201ENST00000482019 MSCO60682 206 aa12.11□□□□□ -0.47
LINC02004-201ENST00000482019 NEFLP07196 543 aa12.11□□□□□ -0.47
LINC02004-201ENST00000482019 PDHBP11177 359 aa12.11□□□□□ -0.47
LINC02004-201ENST00000482019 CYP2C19P33261 490 aa12.11□□□□□ -0.47
LINC02004-201ENST00000482019 PTH1RQ03431 593 aa12.11□□□□□ -0.47
LINC02004-201ENST00000482019 ZNF792Q3KQV3 632 aa12.11□□□□□ -0.47
LINC02004-201ENST00000482019 BTNL9Q6UXG8 535 aa12.11□□□□□ -0.47
LINC02004-201ENST00000482019 RASGRP2Q7LDG7 609 aa12.11□□□□□ -0.47
LINC02004-201ENST00000482019 ANKS1AQ92625 1134 aa12.11□□□□□ -0.47
LINC02004-201ENST00000482019 CHMP4CQ96CF2 233 aa12.11□□□□□ -0.47
LINC02004-201ENST00000482019 ZSCAN10Q96SZ4 725 aaPredicted RBP12.11□□□□□ -0.47
LINC02004-201ENST00000482019 ZKSCAN3Q9BRR0 538 aa12.11□□□□□ -0.47
LINC02004-201ENST00000482019 ZNF536O15090 1300 aa12.11□□□□□ -0.47
LINC02004-201ENST00000482019 DNAJC25-GNG10A0A024R161 153 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 PGK2P07205 417 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 CYP21A2P08686 494 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 SNHG28P0DPA3 235 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 CYBAP13498 195 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 SLC4A3P48751 1232 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 ZNF543Q08ER8 600 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 TRDNQ13061 729 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 TKFCQ3LXA3 575 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 GPATCH4Q5T3I0 446 aaKnown RBP12.1□□□□□ -0.47
LINC02004-201ENST00000482019 LHX8Q68G74 356 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 NECAB2Q7Z6G3 386 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 MSL3Q8N5Y2 521 aaKnown RBP12.1□□□□□ -0.47
LINC02004-201ENST00000482019 DDX11Q96FC9 970 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 UBAC1Q9BSL1 405 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 RANBP17Q9H2T7 1088 aaKnown RBP12.1□□□□□ -0.47
LINC02004-201ENST00000482019 KAT14Q9H8E8 782 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 ZSWIM5Q9P217 1185 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 DDX20Q9UHI6 824 aaKnown RBP12.1□□□□□ -0.47
LINC02004-201ENST00000482019 NRBP1Q9UHY1 535 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 TNKSO95271 1327 aa12.1□□□□□ -0.47
LINC02004-201ENST00000482019 KIAA0100Q14667 2235 aaKnown RBP12.09□□□□□ -0.47
LINC02004-201ENST00000482019 CNGA1P29973 690 aa12.09□□□□□ -0.47
LINC02004-201ENST00000482019 SYDE2Q5VT97 1194 aa12.09□□□□□ -0.47
LINC02004-201ENST00000482019 TTBK2Q6IQ55 1244 aa12.09□□□□□ -0.47
LINC02004-201ENST00000482019 KIAA1211Q6ZU35 1233 aa12.09□□□□□ -0.47
LINC02004-201ENST00000482019 ZNF467Q7Z7K2 595 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms