RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 SASS6Q6UVJ0 657 aa13.38□□□□□ -0.27
GGPS1-205ENST00000482013 PIBF1Q8WXW3 757 aa13.38□□□□□ -0.27
GGPS1-205ENST00000482013 GPKOWQ92917 476 aaPredicted RBP eCLIP13.38□□□□□ -0.27
GGPS1-205ENST00000482013 PIGSQ96S52 555 aa13.38□□□□□ -0.27
GGPS1-205ENST00000482013 UBA5Q9GZZ9 404 aa13.38□□□□□ -0.27
GGPS1-205ENST00000482013 VEZTQ9HBM0 779 aa13.38□□□□□ -0.27
GGPS1-205ENST00000482013 ARHGEF10LQ9HCE6 1279 aa13.38□□□□□ -0.27
GGPS1-205ENST00000482013 FAM13BQ9NYF5 915 aa13.38□□□□□ -0.27
GGPS1-205ENST00000482013 PCDHA6Q9UN73 950 aa13.38□□□□□ -0.27
GGPS1-205ENST00000482013 PCDHA8Q9Y5H6 950 aa13.38□□□□□ -0.27
GGPS1-205ENST00000482013 CCDC194A0A1B0GVG4 234 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 A0A1B0GVL5 298 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 SMCO2A6NFE2 343 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 FAM196BA6NMK8 535 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 GH2P01242 217 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 SLC1A4P43007 532 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 SYKP43405 635 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 GMPSP49915 693 aaPredicted RBP13.37□□□□□ -0.27
GGPS1-205ENST00000482013 ATP2B2Q01814 1243 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 RASSF7Q02833 373 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 TYRO3Q06418 890 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 CAMK4Q16566 473 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 CCDC96Q2M329 555 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 EARS2Q5JPH6 523 aaKnown RBP13.37□□□□□ -0.27
GGPS1-205ENST00000482013 ARL6IP4Q66PJ3 421 aaKnown RBP13.37□□□□□ -0.27
GGPS1-205ENST00000482013 SHC4Q6S5L8 630 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 BTNL9Q6UXG8 535 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 PIK3AP1Q6ZUJ8 805 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 TEX2Q8IWB9 1127 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 ADGRF4Q8IZF3 695 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 NLGN2Q8NFZ4 835 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 HOOK2Q96ED9 719 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 SDF4Q9BRK5 362 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 JMJD4Q9H9V9 463 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 GPCPD1Q9NPB8 672 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 CNOT7Q9UIV1 285 aaKnown RBP13.37□□□□□ -0.27
GGPS1-205ENST00000482013 SBF1O95248 1867 aa13.37□□□□□ -0.27
GGPS1-205ENST00000482013 FRMPD2Q68DX3 1309 aaPredicted RBP13.37□□□□□ -0.27
GGPS1-205ENST00000482013 F5H6K3 240 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 H7C1D1 291 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 LAD1O00515 517 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 ZBTB5O15062 677 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 GDF11O95390 407 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 LMNB1P20700 586 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 ATP2C1P98194 919 aaPredicted RBP13.36□□□□□ -0.27
GGPS1-205ENST00000482013 KLRC3Q07444 240 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 CCDC173Q0VFZ6 552 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 TRAF1Q13077 416 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 NONOQ15233 471 aaKnown RBP eCLIP13.36□□□□□ -0.27
GGPS1-205ENST00000482013 NBPF9Q3BBW0 867 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 MCTP2Q6DN12 878 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 TYW1BQ6NUM6 668 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 CLEC10AQ8IUN9 316 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 MICALL2Q8IY33 904 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 PYM1Q9BRP8 204 aaKnown RBP13.36□□□□□ -0.27
GGPS1-205ENST00000482013 SH2D4AQ9H788 454 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 VAT1LQ9HCJ6 419 aa13.36□□□□□ -0.27
GGPS1-205ENST00000482013 HOOK1Q9UJC3 728 aaKnown RBP13.36□□□□□ -0.27
GGPS1-205ENST00000482013 FAM205CA6NFA0 338 aa13.35□□□□□ -0.27
GGPS1-205ENST00000482013 PLA2G6O60733 806 aa13.35□□□□□ -0.27
GGPS1-205ENST00000482013 CAP2P40123 477 aa13.35□□□□□ -0.27
GGPS1-205ENST00000482013 PRELPP51888 382 aa13.35□□□□□ -0.27
GGPS1-205ENST00000482013 KANK3Q6NY19 840 aa13.35□□□□□ -0.27
GGPS1-205ENST00000482013 RASGRP2Q7LDG7 609 aa13.35□□□□□ -0.27
GGPS1-205ENST00000482013 HOMER1Q86YM7 354 aa13.35□□□□□ -0.27
GGPS1-205ENST00000482013 CCDC34Q96HJ3 373 aa13.35□□□□□ -0.27
GGPS1-205ENST00000482013 CLIC6Q96NY7 704 aa13.35□□□□□ -0.27
GGPS1-205ENST00000482013 PPP1R9BQ96SB3 815 aa13.35□□□□□ -0.27
GGPS1-205ENST00000482013 TMEM39BQ9GZU3 492 aa13.35□□□□□ -0.27
GGPS1-205ENST00000482013 GOPCQ9HD26 462 aa13.35□□□□□ -0.27
GGPS1-205ENST00000482013 USP25Q9UHP3 1055 aa13.35□□□□□ -0.27
GGPS1-205ENST00000482013 KCNH3Q9ULD8 1083 aa13.35□□□□□ -0.27
GGPS1-205ENST00000482013 TMX2Q9Y320 296 aa13.35□□□□□ -0.27
GGPS1-205ENST00000482013 ASNSP08243 561 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 SLURP2P0DP57 97 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 BMP3P12645 472 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 ATP2B1P20020 1258 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 PRPHP41219 470 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 ADCY7P51828 1080 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 MRPL12P52815 198 aaKnown RBP13.34□□□□□ -0.27
GGPS1-205ENST00000482013 RASA3Q14644 834 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 RRP1BQ14684 758 aaKnown RBP13.34□□□□□ -0.27
GGPS1-205ENST00000482013 ZNF174Q15697 407 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 STX1AQ16623 288 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 KIF4BQ2VIQ3 1234 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 TTBK2Q6IQ55 1244 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 CKAP2LQ8IYA6 745 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 GPC2Q8N158 579 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 FAM200AQ8TCP9 573 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 PANK2Q9BZ23 570 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 CPVLQ9H3G5 476 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 RIC8AQ9NPQ8 531 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 ZBTB21Q9ULJ3 1066 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 MRVI1Q9Y6F6 885 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 GJA3Q9Y6H8 435 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 ATAD5Q96QE3 1844 aa13.34□□□□□ -0.27
GGPS1-205ENST00000482013 NDUFB10O96000 172 aa13.33□□□□□ -0.28
GGPS1-205ENST00000482013 LONP1P36776 959 aaKnown RBP13.33□□□□□ -0.28
GGPS1-205ENST00000482013 JAG1P78504 1218 aa13.33□□□□□ -0.28
GGPS1-205ENST00000482013 PTGDRQ13258 359 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms