RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 ADAMTS5Q9UNA0 930 aa18.12■□□□□ 0.49
HDAC6-224ENST00000481929 PARP14Q460N5 1801 aa18.12■□□□□ 0.49
HDAC6-224ENST00000481929 CHD7Q9P2D1 2997 aa18.11■□□□□ 0.49
HDAC6-224ENST00000481929 MAGEB6P1A0A0J9YX57 407 aa18.11■□□□□ 0.49
HDAC6-224ENST00000481929 FGBP02675 491 aa18.11■□□□□ 0.49
HDAC6-224ENST00000481929 ASGR1P07306 291 aa18.11■□□□□ 0.49
HDAC6-224ENST00000481929 CYP2C18P33260 490 aa18.11■□□□□ 0.49
HDAC6-224ENST00000481929 KCNQ1P51787 676 aa18.11■□□□□ 0.49
HDAC6-224ENST00000481929 POLA2Q14181 598 aa18.11■□□□□ 0.49
HDAC6-224ENST00000481929 PPP2R2DQ66LE6 453 aa18.11■□□□□ 0.49
HDAC6-224ENST00000481929 FAM126BQ8IXS8 530 aa18.11■□□□□ 0.49
HDAC6-224ENST00000481929 TRMT2AQ8IZ69 625 aaKnown RBP18.11■□□□□ 0.49
HDAC6-224ENST00000481929 FBXO28Q9NVF7 368 aa18.11■□□□□ 0.49
HDAC6-224ENST00000481929 COL11A1P12107 1806 aaPredicted RBP18.11■□□□□ 0.49
HDAC6-224ENST00000481929 VWA5AO00534 786 aa18.1■□□□□ 0.49
HDAC6-224ENST00000481929 SURF6O75683 361 aaKnown RBP18.1■□□□□ 0.49
HDAC6-224ENST00000481929 SNAI1O95863 264 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-224ENST00000481929 RARSP54136 660 aaKnown RBP18.1■□□□□ 0.49
HDAC6-224ENST00000481929 SIAH1Q8IUQ4 282 aa18.1■□□□□ 0.49
HDAC6-224ENST00000481929 CCDC8Q9H0W5 538 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-224ENST00000481929 ANTXR1Q9H6X2 564 aa18.1■□□□□ 0.49
HDAC6-224ENST00000481929 ZNF214Q9UL59 606 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-224ENST00000481929 ERC2O15083 957 aa18.09■□□□□ 0.49
HDAC6-224ENST00000481929 AKR1B1P15121 316 aa18.09■□□□□ 0.49
HDAC6-224ENST00000481929 IRX5P78411 483 aaPredicted RBP18.09■□□□□ 0.49
HDAC6-224ENST00000481929 TMEM31Q5JXX7 168 aa18.09■□□□□ 0.49
HDAC6-224ENST00000481929 OTOP2Q7RTS6 562 aa18.09■□□□□ 0.49
HDAC6-224ENST00000481929 DDX11Q96FC9 970 aa18.09■□□□□ 0.49
HDAC6-224ENST00000481929 EPHX3Q9H6B9 360 aa18.09■□□□□ 0.49
HDAC6-224ENST00000481929 PPP1R9AQ9ULJ8 1098 aa18.09■□□□□ 0.49
HDAC6-224ENST00000481929 GBF1Q92538 1859 aa18.09■□□□□ 0.49
HDAC6-224ENST00000481929 CYP2D6P10635 497 aa18.08■□□□□ 0.48
HDAC6-224ENST00000481929 GJA9P57773 515 aa18.08■□□□□ 0.48
HDAC6-224ENST00000481929 GNASQ5JWF2 1037 aa18.08■□□□□ 0.48
HDAC6-224ENST00000481929 MAMDC4Q6UXC1 1216 aa18.08■□□□□ 0.48
HDAC6-224ENST00000481929 SSH3Q8TE77 659 aa18.08■□□□□ 0.48
HDAC6-224ENST00000481929 UPF3AQ9H1J1 476 aaKnown RBP18.08■□□□□ 0.48
HDAC6-224ENST00000481929 HIPK3Q9H422 1215 aa18.08■□□□□ 0.48
HDAC6-224ENST00000481929 IPO8O15397 1037 aaKnown RBP18.07■□□□□ 0.48
HDAC6-224ENST00000481929 CD4P01730 458 aa18.07■□□□□ 0.48
HDAC6-224ENST00000481929 RABGGTBP53611 331 aa18.07■□□□□ 0.48
HDAC6-224ENST00000481929 ACVR2BQ13705 512 aa18.07■□□□□ 0.48
HDAC6-224ENST00000481929 REPS2Q8NFH8 660 aa18.07■□□□□ 0.48
HDAC6-224ENST00000481929 SDR42E1Q8WUS8 393 aa18.07■□□□□ 0.48
HDAC6-224ENST00000481929 EAF2Q96CJ1 260 aaPredicted RBP18.07■□□□□ 0.48
HDAC6-224ENST00000481929 DYNLL2Q96FJ2 89 aa18.07■□□□□ 0.48
HDAC6-224ENST00000481929 CCDC17Q96LX7 622 aa18.07■□□□□ 0.48
HDAC6-224ENST00000481929 GOPCQ9HD26 462 aa18.07■□□□□ 0.48
HDAC6-224ENST00000481929 DCP1AQ9NPI6 582 aaPredicted RBP18.07■□□□□ 0.48
HDAC6-224ENST00000481929 PCDHA11Q9Y5I1 949 aa18.07■□□□□ 0.48
HDAC6-224ENST00000481929 SLC4A7Q9Y6M7 1214 aa18.07■□□□□ 0.48
HDAC6-224ENST00000481929 MUC6Q6W4X9 2439 aa18.07■□□□□ 0.48
HDAC6-224ENST00000481929 PRRC2BQ5JSZ5 2229 aaKnown RBP18.06■□□□□ 0.48
HDAC6-224ENST00000481929 MYH8P13535 1937 aa18.06■□□□□ 0.48
HDAC6-224ENST00000481929 GTPBP6O43824 516 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-224ENST00000481929 TRIM27P14373 513 aa18.06■□□□□ 0.48
HDAC6-224ENST00000481929 ZNF467Q7Z7K2 595 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-224ENST00000481929 TEX13BQ9BXU2 312 aa18.06■□□□□ 0.48
HDAC6-224ENST00000481929 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-224ENST00000481929 DNAJC25-GNG10A0A024R161 153 aa18.05■□□□□ 0.48
HDAC6-224ENST00000481929 ADCY6O43306 1168 aa18.05■□□□□ 0.48
HDAC6-224ENST00000481929 RAD21O60216 631 aa18.05■□□□□ 0.48
HDAC6-224ENST00000481929 BCAR3O75815 825 aa18.05■□□□□ 0.48
HDAC6-224ENST00000481929 EEF2P13639 858 aaKnown RBP18.05■□□□□ 0.48
HDAC6-224ENST00000481929 PDE6AP16499 860 aa18.05■□□□□ 0.48
HDAC6-224ENST00000481929 ATP8B2P98198 1209 aa18.05■□□□□ 0.48
HDAC6-224ENST00000481929 CCDC144BQ3MJ40 725 aa18.05■□□□□ 0.48
HDAC6-224ENST00000481929 FAM83BQ5T0W9 1011 aa18.05■□□□□ 0.48
HDAC6-224ENST00000481929 SLC9C2Q5TAH2 1124 aa18.05■□□□□ 0.48
HDAC6-224ENST00000481929 SNRNP48Q6IEG0 339 aaKnown RBP18.05■□□□□ 0.48
HDAC6-224ENST00000481929 ABHD16BQ9H3Z7 469 aa18.05■□□□□ 0.48
HDAC6-224ENST00000481929 COG5Q9UP83 839 aa18.05■□□□□ 0.48
HDAC6-224ENST00000481929 XIRP2A4UGR9 3374 aa18.05■□□□□ 0.48
HDAC6-224ENST00000481929 UMODL1Q5DID0 1318 aa18.04■□□□□ 0.48
HDAC6-224ENST00000481929 ZBBXA8MT70 800 aa18.04■□□□□ 0.48
HDAC6-224ENST00000481929 MYOGP15173 224 aa18.04■□□□□ 0.48
HDAC6-224ENST00000481929 CCL23P55773 120 aa18.04■□□□□ 0.48
HDAC6-224ENST00000481929 TTF1Q15361 905 aaPredicted RBP18.04■□□□□ 0.48
HDAC6-224ENST00000481929 TNNQ9UQP3 1299 aa18.04■□□□□ 0.48
HDAC6-224ENST00000481929 NOP58Q9Y2X3 529 aaKnown RBP18.04■□□□□ 0.48
HDAC6-224ENST00000481929 REV3LO60673 3130 aa18.03■□□□□ 0.48
HDAC6-224ENST00000481929 ATP2A2P16615 1042 aaKnown RBP18.03■□□□□ 0.48
HDAC6-224ENST00000481929 POU3F3P20264 500 aaPredicted RBP18.03■□□□□ 0.48
HDAC6-224ENST00000481929 RPUSD2Q8IZ73 545 aaKnown RBP18.03■□□□□ 0.48
HDAC6-224ENST00000481929 LCORLQ8N3X6 602 aa18.03■□□□□ 0.48
HDAC6-224ENST00000481929 CLUAP1Q96AJ1 413 aa18.03■□□□□ 0.48
HDAC6-224ENST00000481929 SLF1Q9BQI6 1058 aa18.03■□□□□ 0.48
HDAC6-224ENST00000481929 KANSL2Q9H9L4 492 aa18.03■□□□□ 0.48
HDAC6-224ENST00000481929 MTCH2Q9Y6C9 303 aa18.03■□□□□ 0.48
HDAC6-224ENST00000481929 ZNF532Q9HCE3 1301 aa18.02■□□□□ 0.48
HDAC6-224ENST00000481929 TRANK1O15050 2925 aa18.02■□□□□ 0.48
HDAC6-224ENST00000481929 GPR37L1O60883 481 aa18.02■□□□□ 0.48
HDAC6-224ENST00000481929 CABYRO75952 493 aa18.02■□□□□ 0.48
HDAC6-224ENST00000481929 SLC4A3P48751 1232 aa18.02■□□□□ 0.48
HDAC6-224ENST00000481929 CDK8P49336 464 aa18.02■□□□□ 0.48
HDAC6-224ENST00000481929 BEX3Q00994 111 aa18.02■□□□□ 0.48
HDAC6-224ENST00000481929 AMOTL1Q8IY63 956 aa18.02■□□□□ 0.48
HDAC6-224ENST00000481929 SLC43A3Q8NBI5 491 aa18.02■□□□□ 0.48
HDAC6-224ENST00000481929 FRAT1Q92837 279 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-224ENST00000481929 NOC4LQ9BVI4 516 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms