RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 XPO4Q9C0E2 1151 aaKnown RBP20.97■□□□□ 0.95
MRPL28-209ENST00000481453 BARHL2Q9NY43 387 aa20.97■□□□□ 0.95
MRPL28-209ENST00000481453 IFNKQ9P0W0 207 aa20.97■□□□□ 0.95
MRPL28-209ENST00000481453 TUBE1Q9UJT0 475 aa20.97■□□□□ 0.95
MRPL28-209ENST00000481453 COL4A5P29400 1685 aa20.97■□□□□ 0.95
MRPL28-209ENST00000481453 HLA-DOAP06340 250 aa20.97■□□□□ 0.95
MRPL28-209ENST00000481453 ZNF174Q15697 407 aa20.97■□□□□ 0.95
MRPL28-209ENST00000481453 USP49Q70CQ1 688 aa20.97■□□□□ 0.95
MRPL28-209ENST00000481453 SH3BP5LQ7L8J4 393 aa20.97■□□□□ 0.95
MRPL28-209ENST00000481453 DAGLBQ8NCG7 672 aa20.97■□□□□ 0.95
MRPL28-209ENST00000481453 SMARCA1P28370 1054 aa20.96■□□□□ 0.95
MRPL28-209ENST00000481453 TRAPPC10P48553 1259 aa20.96■□□□□ 0.95
MRPL28-209ENST00000481453 HEATR3Q7Z4Q2 680 aa20.96■□□□□ 0.95
MRPL28-209ENST00000481453 LRRC47Q8N1G4 583 aaKnown RBP20.96■□□□□ 0.95
MRPL28-209ENST00000481453 DDTLA6NHG4 134 aaPredicted RBP20.96■□□□□ 0.95
MRPL28-209ENST00000481453 BMP15O95972 392 aa20.96■□□□□ 0.95
MRPL28-209ENST00000481453 SNHG28P0DPA3 235 aa20.96■□□□□ 0.95
MRPL28-209ENST00000481453 DPEP1P16444 411 aa20.96■□□□□ 0.95
MRPL28-209ENST00000481453 RBM5P52756 815 aaKnown RBP eCLIP20.96■□□□□ 0.95
MRPL28-209ENST00000481453 NCBP1Q09161 790 aaKnown RBP20.96■□□□□ 0.95
MRPL28-209ENST00000481453 PNOCQ13519 176 aa20.96■□□□□ 0.95
MRPL28-209ENST00000481453 FBXO41Q8TF61 875 aa20.96■□□□□ 0.95
MRPL28-209ENST00000481453 TRMT1Q9NXH9 659 aaKnown RBP20.96■□□□□ 0.95
MRPL28-209ENST00000481453 EIF6P56537 245 aaKnown RBP20.95■□□□□ 0.94
MRPL28-209ENST00000481453 ATP2C1P98194 919 aaPredicted RBP20.95■□□□□ 0.94
MRPL28-209ENST00000481453 MDM2Q00987 491 aaPredicted RBP20.95■□□□□ 0.94
MRPL28-209ENST00000481453 TCP10Q12799 353 aa20.95■□□□□ 0.94
MRPL28-209ENST00000481453 SYCP1Q15431 976 aa20.95■□□□□ 0.94
MRPL28-209ENST00000481453 CCDC93Q567U6 631 aa20.95■□□□□ 0.94
MRPL28-209ENST00000481453 ISM2Q6H9L7 571 aa20.95■□□□□ 0.94
MRPL28-209ENST00000481453 NYAP1Q6ZVC0 841 aa20.95■□□□□ 0.94
MRPL28-209ENST00000481453 ELOA2Q8IYF1 753 aaPredicted RBP20.95■□□□□ 0.94
MRPL28-209ENST00000481453 RASGRP4Q8TDF6 673 aa20.95■□□□□ 0.94
MRPL28-209ENST00000481453 NPM3O75607 178 aaKnown RBP20.94■□□□□ 0.94
MRPL28-209ENST00000481453 NCAPHQ15003 741 aa20.94■□□□□ 0.94
MRPL28-209ENST00000481453 TMC6Q7Z403 805 aa20.94■□□□□ 0.94
MRPL28-209ENST00000481453 CCAR2Q8N163 923 aaKnown RBP20.94■□□□□ 0.94
MRPL28-209ENST00000481453 CCDC148Q8NFR7 591 aa20.94■□□□□ 0.94
MRPL28-209ENST00000481453 SLC16A10Q8TF71 515 aa20.94■□□□□ 0.94
MRPL28-209ENST00000481453 FOXN1O15353 648 aa20.94■□□□□ 0.94
MRPL28-209ENST00000481453 TTLL1O95922 423 aa20.94■□□□□ 0.94
MRPL28-209ENST00000481453 FOXP4Q8IVH2 680 aaPredicted RBP20.94■□□□□ 0.94
MRPL28-209ENST00000481453 FAM177A1Q8N128 213 aaPredicted RBP20.94■□□□□ 0.94
MRPL28-209ENST00000481453 CNNM3Q8NE01 707 aa20.94■□□□□ 0.94
MRPL28-209ENST00000481453 FERMT2Q96AC1 680 aa20.94■□□□□ 0.94
MRPL28-209ENST00000481453 PSMD1Q99460 953 aa20.94■□□□□ 0.94
MRPL28-209ENST00000481453 DHX36Q9H2U1 1008 aaKnown RBP20.94■□□□□ 0.94
MRPL28-209ENST00000481453 RIOX1Q9H6W3 641 aa20.94■□□□□ 0.94
MRPL28-209ENST00000481453 PCDHA6Q9UN73 950 aa20.94■□□□□ 0.94
MRPL28-209ENST00000481453 PCDHA8Q9Y5H6 950 aa20.94■□□□□ 0.94
MRPL28-209ENST00000481453 POLR2DO15514 142 aaKnown RBP20.93■□□□□ 0.94
MRPL28-209ENST00000481453 PTGDRQ13258 359 aa20.93■□□□□ 0.94
MRPL28-209ENST00000481453 GRIPAP1Q4V328 841 aa20.93■□□□□ 0.94
MRPL28-209ENST00000481453 GALNT17Q6IS24 598 aa20.93■□□□□ 0.94
MRPL28-209ENST00000481453 FRMPD2Q68DX3 1309 aaPredicted RBP20.93■□□□□ 0.94
MRPL28-209ENST00000481453 ACTN4O43707 911 aaKnown RBP20.93■□□□□ 0.94
MRPL28-209ENST00000481453 RTKN2Q8IZC4 609 aa20.93■□□□□ 0.94
MRPL28-209ENST00000481453 CCDC150Q8NCX0 1101 aa20.93■□□□□ 0.94
MRPL28-209ENST00000481453 UBA5Q9GZZ9 404 aa20.93■□□□□ 0.94
MRPL28-209ENST00000481453 SERTAD1Q9UHV2 236 aa20.93■□□□□ 0.94
MRPL28-209ENST00000481453 MYH4Q9Y623 1939 aa20.92■□□□□ 0.94
MRPL28-209ENST00000481453 A0A087X0B3 334 aa20.92■□□□□ 0.94
MRPL28-209ENST00000481453 FAM196BA6NMK8 535 aa20.92■□□□□ 0.94
MRPL28-209ENST00000481453 IKBKBO14920 756 aa20.92■□□□□ 0.94
MRPL28-209ENST00000481453 SHROOM1Q2M3G4 852 aaPredicted RBP20.92■□□□□ 0.94
MRPL28-209ENST00000481453 CFAP100Q494V2 611 aa20.92■□□□□ 0.94
MRPL28-209ENST00000481453 ASPRV1Q53RT3 343 aa20.92■□□□□ 0.94
MRPL28-209ENST00000481453 RRP36Q96EU6 259 aaKnown RBP20.92■□□□□ 0.94
MRPL28-209ENST00000481453 PIGSQ96S52 555 aa20.92■□□□□ 0.94
MRPL28-209ENST00000481453 ZMYND12Q9H0C1 365 aa20.92■□□□□ 0.94
MRPL28-209ENST00000481453 KCND1Q9NSA2 647 aa20.92■□□□□ 0.94
MRPL28-209ENST00000481453 LMOD1P29536 600 aaPredicted RBP20.92■□□□□ 0.94
MRPL28-209ENST00000481453 HOMER1Q86YM7 354 aa20.92■□□□□ 0.94
MRPL28-209ENST00000481453 SMAP1Q8IYB5 467 aaPredicted RBP20.92■□□□□ 0.94
MRPL28-209ENST00000481453 C4orf32Q8N8J7 132 aa20.92■□□□□ 0.94
MRPL28-209ENST00000481453 EPSTI1Q96J88 318 aa20.92■□□□□ 0.94
MRPL28-209ENST00000481453 PRMT6Q96LA8 375 aaPredicted RBP20.92■□□□□ 0.94
MRPL28-209ENST00000481453 TDRD3Q9H7E2 651 aaKnown RBP20.92■□□□□ 0.94
MRPL28-209ENST00000481453 SFPQP23246 707 aaKnown RBP eCLIP20.91■□□□□ 0.94
MRPL28-209ENST00000481453 MCM7P33993 719 aa20.91■□□□□ 0.94
MRPL28-209ENST00000481453 CBX1P83916 185 aa20.91■□□□□ 0.94
MRPL28-209ENST00000481453 IL17AQ16552 155 aa20.91■□□□□ 0.94
MRPL28-209ENST00000481453 CCDC17Q96LX7 622 aa20.91■□□□□ 0.94
MRPL28-209ENST00000481453 PI4KBQ9UBF8 816 aa20.91■□□□□ 0.94
MRPL28-209ENST00000481453 PRR29P0C7W0 189 aa20.9■□□□□ 0.94
MRPL28-209ENST00000481453 FANCCQ00597 558 aa20.9■□□□□ 0.94
MRPL28-209ENST00000481453 ARMCX5Q6P1M9 558 aa20.9■□□□□ 0.94
MRPL28-209ENST00000481453 SYMPKQ92797 1274 aaKnown RBP20.9■□□□□ 0.94
MRPL28-209ENST00000481453 VAT1LQ9HCJ6 419 aa20.9■□□□□ 0.94
MRPL28-209ENST00000481453 ZNF277Q9NRM2 450 aaPredicted RBP20.9■□□□□ 0.94
MRPL28-209ENST00000481453 PCDHA5Q9Y5H7 936 aa20.9■□□□□ 0.94
MRPL28-209ENST00000481453 MPHOSPH10O00566 681 aaKnown RBP20.9■□□□□ 0.94
MRPL28-209ENST00000481453 NAPAP54920 295 aa20.9■□□□□ 0.94
MRPL28-209ENST00000481453 ZNF543Q08ER8 600 aa20.9■□□□□ 0.94
MRPL28-209ENST00000481453 DHX8Q14562 1220 aaKnown RBP20.9■□□□□ 0.94
MRPL28-209ENST00000481453 PDILTQ8N807 584 aa20.9■□□□□ 0.94
MRPL28-209ENST00000481453 GMLQ99445 158 aa20.9■□□□□ 0.94
MRPL28-209ENST00000481453 ATRNL1Q5VV63 1379 aa20.9■□□□□ 0.94
MRPL28-209ENST00000481453 TATDN1Q6P1N9 297 aa20.89■□□□□ 0.94
MRPL28-209ENST00000481453 RSBN1LQ6PCB5 846 aaPredicted RBP20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms