RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 SGPL1O95470 568 aa23.74■■□□□ 1.39
VPS36-204ENST00000480923 HOXC6P09630 235 aa23.74■■□□□ 1.39
VPS36-204ENST00000480923 FCER1AP12319 257 aa23.74■■□□□ 1.39
VPS36-204ENST00000480923 STAT2P52630 851 aa23.74■■□□□ 1.39
VPS36-204ENST00000480923 CCDC96Q2M329 555 aa23.74■■□□□ 1.39
VPS36-204ENST00000480923 SNRNP48Q6IEG0 339 aaKnown RBP23.74■■□□□ 1.39
VPS36-204ENST00000480923 KCTD1Q719H9 257 aa23.74■■□□□ 1.39
VPS36-204ENST00000480923 FAM160B2Q86V87 743 aa23.74■■□□□ 1.39
VPS36-204ENST00000480923 ABRAQ8N0Z2 381 aa23.74■■□□□ 1.39
VPS36-204ENST00000480923 CPXCR1Q8N123 301 aa23.74■■□□□ 1.39
VPS36-204ENST00000480923 NPLOC4Q8TAT6 608 aa23.74■■□□□ 1.39
VPS36-204ENST00000480923 CHURC1Q8WUH1 139 aa23.74■■□□□ 1.39
VPS36-204ENST00000480923 TMEM47Q9BQJ4 181 aa23.74■■□□□ 1.39
VPS36-204ENST00000480923 TEX13BQ9BXU2 312 aa23.74■■□□□ 1.39
VPS36-204ENST00000480923 PARP14Q460N5 1801 aa23.73■■□□□ 1.39
VPS36-204ENST00000480923 SGSM2O43147 1006 aa23.73■■□□□ 1.39
VPS36-204ENST00000480923 KDM4AO75164 1064 aa23.73■■□□□ 1.39
VPS36-204ENST00000480923 TFRCP02786 760 aaKnown RBP23.73■■□□□ 1.39
VPS36-204ENST00000480923 NT5C2P49902 561 aa23.73■■□□□ 1.39
VPS36-204ENST00000480923 CACNB2Q08289 660 aaPredicted RBP23.73■■□□□ 1.39
VPS36-204ENST00000480923 MFSD14CQ5VZR4 134 aa23.73■■□□□ 1.39
VPS36-204ENST00000480923 RCSD1Q6JBY9 416 aa23.73■■□□□ 1.39
VPS36-204ENST00000480923 RASGRP2Q7LDG7 609 aa23.73■■□□□ 1.39
VPS36-204ENST00000480923 MMP19Q99542 508 aa23.73■■□□□ 1.39
VPS36-204ENST00000480923 ZKSCAN3Q9BRR0 538 aa23.73■■□□□ 1.39
VPS36-204ENST00000480923 SLC38A10Q9HBR0 1119 aa23.73■■□□□ 1.39
VPS36-204ENST00000480923 RAVER2Q9HCJ3 691 aaKnown RBP23.73■■□□□ 1.39
VPS36-204ENST00000480923 SLC5A4Q9NY91 659 aa23.73■■□□□ 1.39
VPS36-204ENST00000480923 FLRT1Q9NZU1 646 aa23.73■■□□□ 1.39
VPS36-204ENST00000480923 B4E1Z4 1266 aa23.72■■□□□ 1.39
VPS36-204ENST00000480923 PTH1RQ03431 593 aa23.72■■□□□ 1.39
VPS36-204ENST00000480923 MAP3K21Q5TCX8 1036 aa23.72■■□□□ 1.39
VPS36-204ENST00000480923 IQCA1Q86XH1 822 aa23.72■■□□□ 1.39
VPS36-204ENST00000480923 DCAF4Q8WV16 495 aa23.72■■□□□ 1.39
VPS36-204ENST00000480923 TTC14Q96N46 770 aa23.72■■□□□ 1.39
VPS36-204ENST00000480923 COBLO75128 1261 aa23.71■■□□□ 1.39
VPS36-204ENST00000480923 KCTD2Q14681 263 aa23.71■■□□□ 1.39
VPS36-204ENST00000480923 KRT23Q9C075 422 aa23.71■■□□□ 1.39
VPS36-204ENST00000480923 CNNM2Q9H8M5 875 aa23.71■■□□□ 1.39
VPS36-204ENST00000480923 U3KPZ7 1027 aaPredicted RBP23.71■■□□□ 1.39
VPS36-204ENST00000480923 BRCA2P51587 3418 aa23.71■■□□□ 1.39
VPS36-204ENST00000480923 ATP2A1O14983 1001 aa23.7■■□□□ 1.38
VPS36-204ENST00000480923 FDX1P10109 184 aa23.7■■□□□ 1.38
VPS36-204ENST00000480923 CCDC178Q5BJE1 867 aa23.7■■□□□ 1.38
VPS36-204ENST00000480923 RIPK3Q9Y572 518 aa23.7■■□□□ 1.38
VPS36-204ENST00000480923 LAMA4Q16363 1823 aa23.69■■□□□ 1.38
VPS36-204ENST00000480923 PLA2G6O60733 806 aa23.69■■□□□ 1.38
VPS36-204ENST00000480923 CYP2C19P33261 490 aa23.69■■□□□ 1.38
VPS36-204ENST00000480923 COL11A1P12107 1806 aaPredicted RBP23.68■■□□□ 1.38
VPS36-204ENST00000480923 FRMPD2Q68DX3 1309 aaPredicted RBP23.68■■□□□ 1.38
VPS36-204ENST00000480923 FARP2O94887 1054 aaPredicted RBP23.68■■□□□ 1.38
VPS36-204ENST00000480923 PGK2P07205 417 aa23.68■■□□□ 1.38
VPS36-204ENST00000480923 CAPN2P17655 700 aa23.68■■□□□ 1.38
VPS36-204ENST00000480923 CCND3P30281 292 aaPredicted RBP23.68■■□□□ 1.38
VPS36-204ENST00000480923 OAZ1P54368 228 aa23.68■■□□□ 1.38
VPS36-204ENST00000480923 BMP2KLQ5H9B9 411 aa23.68■■□□□ 1.38
VPS36-204ENST00000480923 OLFML2BQ68BL8 750 aa23.68■■□□□ 1.38
VPS36-204ENST00000480923 DGKHQ86XP1 1220 aa23.68■■□□□ 1.38
VPS36-204ENST00000480923 ZSCAN10Q96SZ4 725 aaPredicted RBP23.68■■□□□ 1.38
VPS36-204ENST00000480923 CRISPLD2Q9H0B8 497 aa23.68■■□□□ 1.38
VPS36-204ENST00000480923 GPCPD1Q9NPB8 672 aa23.68■■□□□ 1.38
VPS36-204ENST00000480923 ZSWIM5Q9P217 1185 aa23.68■■□□□ 1.38
VPS36-204ENST00000480923 ZNF236Q9UL36 1845 aa23.68■■□□□ 1.38
VPS36-204ENST00000480923 PDHBP11177 359 aa23.67■■□□□ 1.38
VPS36-204ENST00000480923 TRDNQ13061 729 aa23.67■■□□□ 1.38
VPS36-204ENST00000480923 TTBK2Q6IQ55 1244 aa23.67■■□□□ 1.38
VPS36-204ENST00000480923 KIAA1211Q6ZU35 1233 aa23.67■■□□□ 1.38
VPS36-204ENST00000480923 PRR12Q9ULL5 1215 aa23.67■■□□□ 1.38
VPS36-204ENST00000480923 CYP21A2P08686 494 aa23.66■■□□□ 1.38
VPS36-204ENST00000480923 CNGA1P29973 690 aa23.66■■□□□ 1.38
VPS36-204ENST00000480923 SLC16A2P36021 539 aa23.66■■□□□ 1.38
VPS36-204ENST00000480923 SNAP25P60880 206 aa23.66■■□□□ 1.38
VPS36-204ENST00000480923 CCDC174Q6PII3 467 aa23.66■■□□□ 1.38
VPS36-204ENST00000480923 DDX11Q96FC9 970 aa23.66■■□□□ 1.38
VPS36-204ENST00000480923 MAML3Q96JK9 1138 aa23.66■■□□□ 1.38
VPS36-204ENST00000480923 UBAC1Q9BSL1 405 aa23.66■■□□□ 1.38
VPS36-204ENST00000480923 KAT14Q9H8E8 782 aa23.66■■□□□ 1.38
VPS36-204ENST00000480923 HOMER2Q9NSB8 354 aa23.66■■□□□ 1.38
VPS36-204ENST00000480923 FBXO40Q9UH90 709 aa23.66■■□□□ 1.38
VPS36-204ENST00000480923 TNKSO95271 1327 aa23.65■■□□□ 1.38
VPS36-204ENST00000480923 CHST13Q8NET6 341 aa23.65■■□□□ 1.38
VPS36-204ENST00000480923 MAP4K1Q92918 833 aa23.65■■□□□ 1.38
VPS36-204ENST00000480923 AGBL1Q96MI9 1066 aa23.65■■□□□ 1.38
VPS36-204ENST00000480923 ESYT1Q9BSJ8 1104 aa23.65■■□□□ 1.38
VPS36-204ENST00000480923 TNRC18O15417 2968 aaPredicted RBP23.64■■□□□ 1.38
VPS36-204ENST00000480923 ZNF543Q08ER8 600 aa23.64■■□□□ 1.37
VPS36-204ENST00000480923 ZNF792Q3KQV3 632 aa23.64■■□□□ 1.37
VPS36-204ENST00000480923 SYDE2Q5VT97 1194 aa23.64■■□□□ 1.37
VPS36-204ENST00000480923 BTNL9Q6UXG8 535 aa23.64■■□□□ 1.37
VPS36-204ENST00000480923 UBE2Q1Q7Z7E8 422 aa23.64■■□□□ 1.37
VPS36-204ENST00000480923 ANKRD35Q8N283 1001 aa23.64■■□□□ 1.37
VPS36-204ENST00000480923 ENAHQ8N8S7 591 aaPredicted RBP23.64■■□□□ 1.37
VPS36-204ENST00000480923 PNMA1Q8ND90 353 aa23.64■■□□□ 1.37
VPS36-204ENST00000480923 RBM8AQ9Y5S9 174 aaKnown RBP23.64■■□□□ 1.37
VPS36-204ENST00000480923 ZNF536O15090 1300 aa23.63■■□□□ 1.37
VPS36-204ENST00000480923 IGHA2P01877 340 aa23.63■■□□□ 1.37
VPS36-204ENST00000480923 RALYLQ86SE5 291 aaKnown RBP23.63■■□□□ 1.37
VPS36-204ENST00000480923 ANKS1AQ92625 1134 aa23.63■■□□□ 1.37
VPS36-204ENST00000480923 ACAD9Q9H845 621 aa23.63■■□□□ 1.37
VPS36-204ENST00000480923 RNF146Q9NTX7 359 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms