RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 RRAGAQ7L523 313 aa10.46□□□□□ -0.74
VEGFA-212ENST00000480614 BBS5Q8N3I7 341 aa10.46□□□□□ -0.74
VEGFA-212ENST00000480614 RXRAP19793 462 aa10.46□□□□□ -0.74
VEGFA-212ENST00000480614 DIS3L2Q8IYB7 885 aaKnown RBP10.46□□□□□ -0.74
VEGFA-212ENST00000480614 KBTBD3Q8NAB2 608 aa10.46□□□□□ -0.74
VEGFA-212ENST00000480614 GLG1Q92896 1179 aa10.46□□□□□ -0.74
VEGFA-212ENST00000480614 TTC1Q99614 292 aa10.46□□□□□ -0.74
VEGFA-212ENST00000480614 ARHGEF6Q15052 776 aa10.46□□□□□ -0.74
VEGFA-212ENST00000480614 EIF2AQ9BY44 585 aaKnown RBP10.46□□□□□ -0.74
VEGFA-212ENST00000480614 TM6SF1Q9BZW5 370 aa10.46□□□□□ -0.74
VEGFA-212ENST00000480614 LONRF2Q1L5Z9 754 aa10.46□□□□□ -0.74
VEGFA-212ENST00000480614 OR8K1Q8NGG5 319 aa10.46□□□□□ -0.74
VEGFA-212ENST00000480614 GJA3Q9Y6H8 435 aa10.46□□□□□ -0.74
VEGFA-212ENST00000480614 ARHGAP42A6NI28 874 aa10.46□□□□□ -0.74
VEGFA-212ENST00000480614 C2CD5Q86YS7 1000 aa10.46□□□□□ -0.74
VEGFA-212ENST00000480614 XAGE2Q96GT9 111 aa10.46□□□□□ -0.74
VEGFA-212ENST00000480614 ATP6V1E1P36543 226 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 ELF2Q15723 593 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 JADE1Q6IE81 842 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 SPATA5Q8NB90 893 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 LPIN2Q92539 896 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 EFHD1Q9BUP0 239 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 SPOUT1Q5T280 376 aaKnown RBP10.45□□□□□ -0.74
VEGFA-212ENST00000480614 CDC37L1Q7L3B6 337 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 EXOC8Q8IYI6 725 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 LRGUKQ96M69 825 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 DSCC1Q9BVC3 393 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 SPZ1Q9BXG8 430 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 MRPL11Q9Y3B7 192 aaKnown RBP10.45□□□□□ -0.74
VEGFA-212ENST00000480614 ZNF449Q6P9G9 518 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 HELBQ8NG08 1087 aaPredicted RBP10.45□□□□□ -0.74
VEGFA-212ENST00000480614 CBX8Q9HC52 389 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 BSPRYQ5W0U4 402 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 HYOU1Q9Y4L1 999 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 PPP2R5CQ13362 524 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 C8orf34Q49A92 452 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 MYOCDQ8IZQ8 938 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 COL17A1Q9UMD9 1497 aaPredicted RBP10.45□□□□□ -0.74
VEGFA-212ENST00000480614 XPOTO43592 962 aaKnown RBP10.45□□□□□ -0.74
VEGFA-212ENST00000480614 ATF2P15336 505 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 NFKBIAP25963 317 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 TAB2Q9NYJ8 693 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 CTNNA1P35221 906 aaKnown RBP10.45□□□□□ -0.74
VEGFA-212ENST00000480614 MORC3Q14149 939 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 KIF22Q14807 665 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.45□□□□□ -0.74
VEGFA-212ENST00000480614 ARMCX3Q9UH62 379 aaPredicted RBP10.45□□□□□ -0.74
VEGFA-212ENST00000480614 NPC1L1Q9UHC9 1359 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 SART1O43290 800 aaKnown RBP10.45□□□□□ -0.74
VEGFA-212ENST00000480614 ATP8B3O60423 1300 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 CAPN9O14815 690 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 CWF19L2Q2TBE0 894 aaKnown RBP10.45□□□□□ -0.74
VEGFA-212ENST00000480614 MAP7D3Q8IWC1 876 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 KCNJ18B7U540 433 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 KCNJ12Q14500 433 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 HESX1Q9UBX0 185 aa10.45□□□□□ -0.74
VEGFA-212ENST00000480614 MYO18AQ92614 2054 aaKnown RBP10.44□□□□□ -0.74
VEGFA-212ENST00000480614 ATP10DQ9P241 1426 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 ZNF233A6NK53 670 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 SUN1O94901 812 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 CABP7Q86V35 215 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 ASXL2Q76L83 1435 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 ADCY8P40145 1251 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 ARHGEF16Q5VV41 709 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 TPH2Q8IWU9 490 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 MTHFSDQ2M296 383 aaKnown RBP10.44□□□□□ -0.74
VEGFA-212ENST00000480614 MMEL1Q495T6 779 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 BEND3Q5T5X7 828 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 TYW1BQ6NUM6 668 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 SMCR8Q8TEV9 937 aaPredicted RBP10.44□□□□□ -0.74
VEGFA-212ENST00000480614 BLMP54132 1417 aaPredicted RBP10.44□□□□□ -0.74
VEGFA-212ENST00000480614 LAD1O00515 517 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 FAM160B1Q5W0V3 765 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 NLRP7Q8WX94 980 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 MRRFQ96E11 262 aaKnown RBP10.44□□□□□ -0.74
VEGFA-212ENST00000480614 CARD6Q9BX69 1037 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 COL4A3BPQ9Y5P4 624 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 H7C1D1 291 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 ALDH1B1P30837 517 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 AATFQ9NY61 560 aaKnown RBP eCLIP10.44□□□□□ -0.742e-17■■□□□ 11.9
VEGFA-212ENST00000480614 PEG3Q9GZU2 1588 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 IFNB1P01574 187 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 PHEXP78562 749 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 MTX1Q13505 466 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 FAM178BQ8IXR5 827 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 ARMT1Q9H993 441 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 TCP1P17987 556 aaKnown RBP10.44□□□□□ -0.74
VEGFA-212ENST00000480614 NSMFQ6X4W1 530 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 METTL13Q8N6R0 699 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 CSADQ9Y600 493 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 MYH11P35749 1972 aa10.44□□□□□ -0.74
VEGFA-212ENST00000480614 OPHN1O60890 802 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 OAS2P29728 719 aaKnown RBP10.43□□□□□ -0.74
VEGFA-212ENST00000480614 DEUP1Q05D60 604 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 FAM193BQ96PV7 902 aaPredicted RBP10.43□□□□□ -0.74
VEGFA-212ENST00000480614 SGSM2O43147 1006 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 NSFP46459 744 aaKnown RBP10.43□□□□□ -0.74
VEGFA-212ENST00000480614 GPBP1Q86WP2 473 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 CCDC87Q9NVE4 849 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 MYO1AQ9UBC5 1043 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms