RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 USP17L18D6R9N7 530 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 USP17L22D6RA61 530 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 USP17L17D6RBQ6 530 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 USP17L19D6RCP7 530 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 USP17L20D6RJB6 530 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 GJB1P08034 283 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 CCL5P13501 91 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 GRK4P32298 578 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 LIFRP42702 1097 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 MNX1P50219 401 aaPredicted RBP14.33□□□□□ -0.12
TRA2B-212ENST00000480461 USP17L24Q0WX57 530 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 TROAPQ12815 778 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 TOB2Q14106 344 aaPredicted RBP14.33□□□□□ -0.12
TRA2B-212ENST00000480461 PPP4R3BQ5MIZ7 849 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 C17orf99Q6UX52 265 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 KCTD1Q719H9 257 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 FBXL16Q8N461 479 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 TBC1D32Q96NH3 1257 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 MYL10Q9BUA6 226 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 KAT14Q9H8E8 782 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 NR2E3Q9Y5X4 410 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 CYP46A1Q9Y6A2 500 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 ADGRA2Q96PE1 1338 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 WDR46O15213 610 aaKnown RBP14.32□□□□□ -0.12
TRA2B-212ENST00000480461 GOLGA8HP0CJ92 632 aa14.32□□□□□ -0.12
TRA2B-212ENST00000480461 BMP3P12645 472 aa14.32□□□□□ -0.12
TRA2B-212ENST00000480461 OSBPP22059 807 aa14.32□□□□□ -0.12
TRA2B-212ENST00000480461 PSMC4P43686 418 aa14.32□□□□□ -0.12
TRA2B-212ENST00000480461 COG2Q14746 738 aa14.32□□□□□ -0.12
TRA2B-212ENST00000480461 SLC35G1Q2M3R5 365 aa14.32□□□□□ -0.12
TRA2B-212ENST00000480461 SGMS1Q86VZ5 419 aa14.32□□□□□ -0.12
TRA2B-212ENST00000480461 RAB11FIP4Q86YS3 637 aa14.32□□□□□ -0.12
TRA2B-212ENST00000480461 STAG2Q8N3U4 1231 aa14.32□□□□□ -0.12
TRA2B-212ENST00000480461 CPVLQ9H3G5 476 aa14.32□□□□□ -0.12
TRA2B-212ENST00000480461 RBPJLQ9UBG7 517 aa14.32□□□□□ -0.12
TRA2B-212ENST00000480461 ADAMTS5Q9UNA0 930 aa14.32□□□□□ -0.12
TRA2B-212ENST00000480461 FRMPD2Q68DX3 1309 aaPredicted RBP14.32□□□□□ -0.12
TRA2B-212ENST00000480461 ERICH2A1L162 156 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 TMEM232C9JQI7 657 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 CNMDO75829 334 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 FARP2O94887 1054 aaPredicted RBP14.31□□□□□ -0.12
TRA2B-212ENST00000480461 SLC16A2P36021 539 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 SLC1A4P43007 532 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 ZNF543Q08ER8 600 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 APOBRQ0VD83 1088 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 SART3Q15020 963 aaKnown RBP14.31□□□□□ -0.12
TRA2B-212ENST00000480461 Q3C1V9 767 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 TMTC2Q8N394 836 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 RAET1EQ8TD07 263 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 RNF208Q9H0X6 261 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 TXNRD2Q9NNW7 524 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 GPCPD1Q9NPB8 672 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 CPA4Q9UI42 421 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 MAD2L2Q9UI95 211 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 MYPNQ86TC9 1320 aa14.31□□□□□ -0.12
TRA2B-212ENST00000480461 LOC285556D6RIA3 1793 aa14.3□□□□□ -0.12
TRA2B-212ENST00000480461 PALM3A6NDB9 673 aaPredicted RBP14.3□□□□□ -0.12
TRA2B-212ENST00000480461 SPDYE16A6NNV3 312 aaPredicted RBP14.3□□□□□ -0.12
TRA2B-212ENST00000480461 RXRAP19793 462 aa14.3□□□□□ -0.12
TRA2B-212ENST00000480461 DSG3P32926 999 aa14.3□□□□□ -0.12
TRA2B-212ENST00000480461 NEK4P51957 841 aa14.3□□□□□ -0.12
TRA2B-212ENST00000480461 EVCP57679 992 aa14.3□□□□□ -0.12
TRA2B-212ENST00000480461 HERVK_113P62684 666 aa14.3□□□□□ -0.12
TRA2B-212ENST00000480461 ZNF654Q8IZM8 581 aa14.3□□□□□ -0.12
TRA2B-212ENST00000480461 U2AF1L4Q8WU68 220 aaKnown RBP14.3□□□□□ -0.12
TRA2B-212ENST00000480461 DCAF4Q8WV16 495 aa14.3□□□□□ -0.12
TRA2B-212ENST00000480461 BRF1Q92994 677 aa14.3□□□□□ -0.12
TRA2B-212ENST00000480461 TANGO6Q9C0B7 1094 aa14.3□□□□□ -0.12
TRA2B-212ENST00000480461 UBA5Q9GZZ9 404 aa14.3□□□□□ -0.12
TRA2B-212ENST00000480461 ALDH8A1Q9H2A2 487 aaPredicted RBP14.3□□□□□ -0.12
TRA2B-212ENST00000480461 FAM217BQ9NTX9 383 aaPredicted RBP14.3□□□□□ -0.12
TRA2B-212ENST00000480461 PDRG1Q9NUG6 133 aa14.3□□□□□ -0.12
TRA2B-212ENST00000480461 BTBD7Q9P203 1132 aa14.3□□□□□ -0.12
TRA2B-212ENST00000480461 UNC80Q8N2C7 3258 aa14.3□□□□□ -0.12
TRA2B-212ENST00000480461 MYH4Q9Y623 1939 aa14.29□□□□□ -0.12
TRA2B-212ENST00000480461 FLOT1O75955 427 aa14.29□□□□□ -0.12
TRA2B-212ENST00000480461 FMNL1O95466 1100 aaPredicted RBP14.29□□□□□ -0.12
TRA2B-212ENST00000480461 BCRP11274 1271 aa14.29□□□□□ -0.12
TRA2B-212ENST00000480461 SNAP25P60880 206 aa14.29□□□□□ -0.12
TRA2B-212ENST00000480461 GRM4Q14833 912 aa14.29□□□□□ -0.12
TRA2B-212ENST00000480461 APOA5Q6Q788 366 aa14.29□□□□□ -0.12
TRA2B-212ENST00000480461 BTNL9Q6UXG8 535 aa14.29□□□□□ -0.12
TRA2B-212ENST00000480461 NFXL1Q6ZNB6 911 aa14.29□□□□□ -0.12
TRA2B-212ENST00000480461 REPS2Q8NFH8 660 aa14.29□□□□□ -0.12
TRA2B-212ENST00000480461 ATG4CQ96DT6 458 aa14.29□□□□□ -0.12
TRA2B-212ENST00000480461 HOXC10Q9NYD6 342 aa14.29□□□□□ -0.12
TRA2B-212ENST00000480461 PPP1R9AQ9ULJ8 1098 aa14.29□□□□□ -0.12
TRA2B-212ENST00000480461 KLF18A0A0U1RQI7 1052 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 CCDC69A6NI79 296 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 VWA5AO00534 786 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 PLA2G6O60733 806 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 HOXD10P28358 340 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 PDIA3P30101 505 aaKnown RBP14.28□□□□□ -0.12
TRA2B-212ENST00000480461 AK2P54819 239 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 UBXN2AP68543 259 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 IRX3P78415 501 aaPredicted RBP14.28□□□□□ -0.12
TRA2B-212ENST00000480461 PRKCZQ05513 592 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 RLFQ13129 1914 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 PABPC4Q13310 644 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRA2B-212ENST00000480461 CCDC96Q2M329 555 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms