RNA–Protein interactions for RNA: ENST00000480348.6

CNKSR1-204, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 5

Gene CNKSR1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-204ENST00000480348 DIAPH3Q9NSV4 1193 aa12.79□□□□□ -0.36
CNKSR1-204ENST00000480348 FBXO28Q9NVF7 368 aa12.79□□□□□ -0.36
CNKSR1-204ENST00000480348 MTMR4Q9NYA4 1195 aa12.79□□□□□ -0.36
CNKSR1-204ENST00000480348 MCM3APO60318 1980 aa12.79□□□□□ -0.36
CNKSR1-204ENST00000480348 COBLO75128 1261 aa12.78□□□□□ -0.36
CNKSR1-204ENST00000480348 OAZ1P54368 228 aa12.78□□□□□ -0.36
CNKSR1-204ENST00000480348 VPS53Q5VIR6 699 aa12.78□□□□□ -0.36
CNKSR1-204ENST00000480348 REPS2Q8NFH8 660 aa12.78□□□□□ -0.36
CNKSR1-204ENST00000480348 NEDD1Q8NHV4 660 aa12.78□□□□□ -0.36
CNKSR1-204ENST00000480348 SENP6Q9GZR1 1112 aaPredicted RBP12.78□□□□□ -0.36
CNKSR1-204ENST00000480348 OSBPL3Q9H4L5 887 aa12.78□□□□□ -0.36
CNKSR1-204ENST00000480348 CLIP2Q9UDT6 1046 aa12.78□□□□□ -0.36
CNKSR1-204ENST00000480348 FBXO40Q9UH90 709 aa12.78□□□□□ -0.36
CNKSR1-204ENST00000480348 FEM1BQ9UK73 627 aa12.78□□□□□ -0.36
CNKSR1-204ENST00000480348 ZMYND8Q9ULU4 1186 aaPredicted RBP12.78□□□□□ -0.36
CNKSR1-204ENST00000480348 ZBED4O75132 1171 aa12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 SDSP20132 328 aa12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 STAT2P52630 851 aa12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 MFAP1P55081 439 aaKnown RBP12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 CTDSPL2Q05D32 466 aa12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 LRRC26Q2I0M4 334 aa12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 SNRNP48Q6IEG0 339 aaKnown RBP12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 GPR153Q6NV75 609 aa12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 TRPV1Q8NER1 839 aa12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 TINF2Q9BSI4 451 aa12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 TOMM22Q9NS69 142 aa12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 PRKAG2Q9UGJ0 569 aa12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 ISY1Q9ULR0 285 aaKnown RBP12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 CNPY2Q9Y2B0 182 aa12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 ZMYM6O95789 1325 aa12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 CCDC171Q6TFL3 1326 aa12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 SYNGAP1Q96PV0 1343 aa12.77□□□□□ -0.37
CNKSR1-204ENST00000480348 TSPY2A6NKD2 308 aa12.76□□□□□ -0.37
CNKSR1-204ENST00000480348 RARBP10826 455 aa12.76□□□□□ -0.37
CNKSR1-204ENST00000480348 AKR1A1P14550 325 aa12.76□□□□□ -0.37
CNKSR1-204ENST00000480348 SYN1P17600 705 aa12.76□□□□□ -0.37
CNKSR1-204ENST00000480348 MAGEA10P43363 369 aaPredicted RBP12.76□□□□□ -0.37
CNKSR1-204ENST00000480348 TFAP4Q01664 338 aa12.76□□□□□ -0.37
CNKSR1-204ENST00000480348 FAM47AQ5JRC9 791 aa12.76□□□□□ -0.37
CNKSR1-204ENST00000480348 ZNF467Q7Z7K2 595 aaPredicted RBP12.76□□□□□ -0.37
CNKSR1-204ENST00000480348 FAM160B2Q86V87 743 aa12.76□□□□□ -0.37
CNKSR1-204ENST00000480348 TDHQ8IZJ6 230 aa12.76□□□□□ -0.37
CNKSR1-204ENST00000480348 GMCL1Q96IK5 515 aa12.76□□□□□ -0.37
CNKSR1-204ENST00000480348 NUP88Q99567 741 aaPredicted RBP12.76□□□□□ -0.37
CNKSR1-204ENST00000480348 SLC38A10Q9HBR0 1119 aa12.76□□□□□ -0.37
CNKSR1-204ENST00000480348 LRRC37A2A6NM11 1700 aa12.76□□□□□ -0.37
CNKSR1-204ENST00000480348 HIP1O00291 1037 aa12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 FOXP2O15409 715 aa12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 RANBP6O60518 1105 aaKnown RBP12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 BMP3P12645 472 aa12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 ZNF792Q3KQV3 632 aa12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 C1orf53Q5VUE5 145 aa12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 SLFN13Q68D06 897 aa12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 CWC27Q6UX04 472 aaKnown RBP12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 RNF180Q86T96 592 aa12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 ZNF589Q86UQ0 364 aaPredicted RBP12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 LRRC47Q8N1G4 583 aaKnown RBP12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 CHST13Q8NET6 341 aa12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 CHURC1Q8WUH1 139 aa12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 KIFC2Q96AC6 838 aa12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 DDX11Q96FC9 970 aa12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 LBHD1Q9BQE6 289 aaPredicted RBP12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 UBE2OQ9C0C9 1292 aaKnown RBP12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 XPNPEP3Q9NQH7 507 aa12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 ANAPC4Q9UJX5 808 aa12.75□□□□□ -0.37
CNKSR1-204ENST00000480348 RANBP2P49792 3224 aaKnown RBP12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 PLA2G6O60733 806 aa12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 FGAP02671 866 aa12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 PGK2P07205 417 aa12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 HSPD1P10809 573 aaKnown RBP12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 PCP11498 1178 aaKnown RBP12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 PDE4AP27815 886 aa12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 SLC1A4P43007 532 aa12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 NT5C2P49902 561 aa12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 RTP1P59025 263 aa12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 SNX17Q15036 470 aa12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 ALX1Q15699 326 aa12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 LRIT3Q3SXY7 679 aa12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 RRP12Q5JTH9 1297 aaKnown RBP12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 STX8Q9UNK0 236 aa12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.74□□□□□ -0.37
CNKSR1-204ENST00000480348 DNAJC25-GNG10A0A024R161 153 aa12.73□□□□□ -0.37
CNKSR1-204ENST00000480348 ORC4O43929 436 aa12.73□□□□□ -0.37
CNKSR1-204ENST00000480348 HAND2P61296 217 aa12.73□□□□□ -0.37
CNKSR1-204ENST00000480348 IKQ13123 557 aaPredicted RBP12.73□□□□□ -0.37
CNKSR1-204ENST00000480348 LRRC41Q15345 812 aa12.73□□□□□ -0.37
CNKSR1-204ENST00000480348 TKFCQ3LXA3 575 aa12.73□□□□□ -0.37
CNKSR1-204ENST00000480348 GJC2Q5T442 439 aaPredicted RBP12.73□□□□□ -0.37
CNKSR1-204ENST00000480348 MAMDC4Q6UXC1 1216 aa12.73□□□□□ -0.37
CNKSR1-204ENST00000480348 CPXCR1Q8N123 301 aa12.73□□□□□ -0.37
CNKSR1-204ENST00000480348 ANKRD35Q8N283 1001 aa12.73□□□□□ -0.37
CNKSR1-204ENST00000480348 INCENPQ9NQS7 918 aa12.73□□□□□ -0.37
CNKSR1-204ENST00000480348 PHF24Q9UPV7 400 aa12.73□□□□□ -0.37
CNKSR1-204ENST00000480348 MYH6P13533 1939 aa12.72□□□□□ -0.37
CNKSR1-204ENST00000480348 TMEM232C9JQI7 657 aa12.72□□□□□ -0.37
CNKSR1-204ENST00000480348 MYCNP04198 464 aaPredicted RBP12.72□□□□□ -0.37
CNKSR1-204ENST00000480348 CENPBP07199 599 aaPredicted RBP12.72□□□□□ -0.37
CNKSR1-204ENST00000480348 ATN1P54259 1190 aaPredicted RBP12.72□□□□□ -0.37
CNKSR1-204ENST00000480348 TTC22Q5TAA0 569 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms