RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 DCP1AQ9NPI6 582 aaPredicted RBP8.48□□□□□ -1.05
COL17A1-205ENST00000480127 FBXO28Q9NVF7 368 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 RAPGEFL1Q9UHV5 662 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 TBX21Q9UL17 535 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 NAV1Q8NEY1 1877 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 SYNRGQ9UMZ2 1314 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 CDH23Q9H251 3354 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 TCRBV5S4A2TA0A5A2 114 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 GRXCR1A8MXD5 290 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 DCDC2CA8MYV0 355 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 MINDY4BA8MYZ0 360 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 VWA5AO00534 786 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 ERC2O15083 957 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 SNAI1O95863 264 aaPredicted RBP8.47□□□□□ -1.05
COL17A1-205ENST00000480127 SLC3A2P08195 630 aaKnown RBP8.47□□□□□ -1.05
COL17A1-205ENST00000480127 ATP5JP18859 108 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 STAT3P40763 770 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 CDK7P50613 346 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 IKQ13123 557 aaPredicted RBP8.47□□□□□ -1.05
COL17A1-205ENST00000480127 KCTD2Q14681 263 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 TMEM240Q5SV17 173 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 AKNAD1Q5T1N1 836 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 MFSD5Q6N075 450 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 REPS2Q8NFH8 660 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 ATXN2LQ8WWM7 1075 aaKnown RBP8.47□□□□□ -1.05
COL17A1-205ENST00000480127 HAUS7Q99871 368 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 PBX4Q9BYU1 374 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 NACAP1Q9BZK3 213 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 STARD7Q9NQZ5 370 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 ECHDC1Q9NTX5 307 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 ZNF214Q9UL59 606 aaPredicted RBP8.47□□□□□ -1.05
COL17A1-205ENST00000480127 SMCHD1A6NHR9 2005 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 PARP14Q460N5 1801 aa8.47□□□□□ -1.05
COL17A1-205ENST00000480127 PRUNE2Q8WUY3 3088 aa8.46□□□□□ -1.05
COL17A1-205ENST00000480127 MYADML2A6NDP7 307 aa8.46□□□□□ -1.06
COL17A1-205ENST00000480127 MOXD2PA6NHM9 499 aa8.46□□□□□ -1.06
COL17A1-205ENST00000480127 USP17L12C9JPN9 530 aa8.46□□□□□ -1.06
COL17A1-205ENST00000480127 USP17L21D6R901 530 aa8.46□□□□□ -1.06
COL17A1-205ENST00000480127 PRKAB2O43741 272 aa8.46□□□□□ -1.06
COL17A1-205ENST00000480127 EEF2P13639 858 aaKnown RBP8.46□□□□□ -1.06
COL17A1-205ENST00000480127 IRX5P78411 483 aaPredicted RBP8.46□□□□□ -1.06
COL17A1-205ENST00000480127 ADGRE1Q14246 886 aa8.46□□□□□ -1.06
COL17A1-205ENST00000480127 KCNA10Q16322 511 aa8.46□□□□□ -1.06
COL17A1-205ENST00000480127 SLFNL1Q499Z3 407 aa8.46□□□□□ -1.06
COL17A1-205ENST00000480127 MSL3Q8N5Y2 521 aaKnown RBP8.46□□□□□ -1.06
COL17A1-205ENST00000480127 NUP133Q8WUM0 1156 aa8.46□□□□□ -1.06
COL17A1-205ENST00000480127 PPM1EQ8WY54 764 aa8.46□□□□□ -1.06
COL17A1-205ENST00000480127 CCDC17Q96LX7 622 aa8.46□□□□□ -1.06
COL17A1-205ENST00000480127 ASB2Q96Q27 587 aa8.46□□□□□ -1.06
COL17A1-205ENST00000480127 FSD1Q9BTV5 496 aa8.46□□□□□ -1.06
COL17A1-205ENST00000480127 PRDM12Q9H4Q4 367 aa8.46□□□□□ -1.06
COL17A1-205ENST00000480127 PPP1R9AQ9ULJ8 1098 aa8.46□□□□□ -1.06
COL17A1-205ENST00000480127 ZNFX1Q9P2E3 1918 aaKnown RBP8.45□□□□□ -1.06
COL17A1-205ENST00000480127 DNAJC25-GNG10A0A024R161 153 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 CYP2D7A0A087X1C5 515 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 ADCY6O43306 1168 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 DUSP11O75319 330 aaKnown RBP8.45□□□□□ -1.06
COL17A1-205ENST00000480127 CSF2RAP15509 400 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 CST5P28325 142 aaPredicted RBP8.45□□□□□ -1.06
COL17A1-205ENST00000480127 COPB2P35606 906 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 ADD2P35612 726 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 CDK8P49336 464 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 PPIGQ13427 754 aaKnown RBP eCLIP8.45□□□□□ -1.06
COL17A1-205ENST00000480127 C20orf194Q5TEA3 1177 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 C12orf60Q5U649 245 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 MAMDC4Q6UXC1 1216 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 ZNF365Q70YC5 407 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 ZNF444Q8N0Y2 327 aaPredicted RBP8.45□□□□□ -1.06
COL17A1-205ENST00000480127 ADAMTS19Q8TE59 1207 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 GAS2L1Q99501 681 aaPredicted RBP8.45□□□□□ -1.06
COL17A1-205ENST00000480127 KANSL2Q9H9L4 492 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 THEGQ9P2T0 379 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 ARPP21Q9UBL0 812 aaPredicted RBP8.45□□□□□ -1.06
COL17A1-205ENST00000480127 FAM184BQ9ULE4 1060 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 CNPY2Q9Y2B0 182 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 RIPK3Q9Y572 518 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 ELP1O95163 1332 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 SYNGAP1Q96PV0 1343 aa8.45□□□□□ -1.06
COL17A1-205ENST00000480127 COL11A1P12107 1806 aaPredicted RBP8.45□□□□□ -1.06
COL17A1-205ENST00000480127 ASGR1P07306 291 aa8.44□□□□□ -1.06
COL17A1-205ENST00000480127 ZFYP08048 801 aaPredicted RBP8.44□□□□□ -1.06
COL17A1-205ENST00000480127 ACRP10323 421 aa8.44□□□□□ -1.06
COL17A1-205ENST00000480127 MRPS5P82675 430 aaKnown RBP8.44□□□□□ -1.06
COL17A1-205ENST00000480127 UBE3CQ15386 1083 aa8.44□□□□□ -1.06
COL17A1-205ENST00000480127 CCDC85BQ15834 202 aaPredicted RBP8.44□□□□□ -1.06
COL17A1-205ENST00000480127 FAM83BQ5T0W9 1011 aa8.44□□□□□ -1.06
COL17A1-205ENST00000480127 TSHZ3Q63HK5 1081 aa8.44□□□□□ -1.06
COL17A1-205ENST00000480127 CCDC129Q6ZRS4 1044 aa8.44□□□□□ -1.06
COL17A1-205ENST00000480127 C16orf86Q6ZW13 317 aa8.44□□□□□ -1.06
COL17A1-205ENST00000480127 SIRT2Q8IXJ6 389 aa8.44□□□□□ -1.06
COL17A1-205ENST00000480127 FAM126BQ8IXS8 530 aa8.44□□□□□ -1.06
COL17A1-205ENST00000480127 FGD4Q96M96 766 aa8.44□□□□□ -1.06
COL17A1-205ENST00000480127 GLT1D1Q96MS3 346 aa8.44□□□□□ -1.06
COL17A1-205ENST00000480127 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.44□□□□□ -1.06
COL17A1-205ENST00000480127 UPF3AQ9H1J1 476 aaKnown RBP8.44□□□□□ -1.06
COL17A1-205ENST00000480127 TOMM22Q9NS69 142 aa8.44□□□□□ -1.06
COL17A1-205ENST00000480127 ZHX1Q9UKY1 873 aaPredicted RBP8.44□□□□□ -1.06
COL17A1-205ENST00000480127 MROH7Q68CQ1 1323 aa8.44□□□□□ -1.06
COL17A1-205ENST00000480127 PLXNA1Q9UIW2 1896 aa8.44□□□□□ -1.06
COL17A1-205ENST00000480127 ARVCFO00192 962 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms