RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 ROBO3Q96MS0 1386 aa12.5□□□□□ -0.41
SMURF1-204ENST00000480055 GREB1LQ9C091 1923 aaPredicted RBP12.49□□□□□ -0.41
SMURF1-204ENST00000480055 GUCY1A2P33402 732 aa12.49□□□□□ -0.41
SMURF1-204ENST00000480055 ADCYAP1R1P41586 468 aa12.49□□□□□ -0.41
SMURF1-204ENST00000480055 LRRC41Q15345 812 aa12.49□□□□□ -0.41
SMURF1-204ENST00000480055 SLC9C2Q5TAH2 1124 aa12.49□□□□□ -0.41
SMURF1-204ENST00000480055 ANO1Q5XXA6 986 aa12.49□□□□□ -0.41
SMURF1-204ENST00000480055 TMED8Q6PL24 325 aaPredicted RBP12.49□□□□□ -0.41
SMURF1-204ENST00000480055 NCAPG2Q86XI2 1143 aa12.49□□□□□ -0.41
SMURF1-204ENST00000480055 APBB1O00213 710 aa12.48□□□□□ -0.41
SMURF1-204ENST00000480055 COBLO75128 1261 aa12.48□□□□□ -0.41
SMURF1-204ENST00000480055 ERCC3P19447 782 aa12.48□□□□□ -0.41
SMURF1-204ENST00000480055 ITGB8P26012 769 aa12.48□□□□□ -0.41
SMURF1-204ENST00000480055 MLLT3P42568 568 aaPredicted RBP12.48□□□□□ -0.41
SMURF1-204ENST00000480055 FOSBP53539 338 aa12.48□□□□□ -0.41
SMURF1-204ENST00000480055 FAM47AQ5JRC9 791 aa12.48□□□□□ -0.41
SMURF1-204ENST00000480055 RNPC3Q96LT9 517 aaKnown RBP12.48□□□□□ -0.41
SMURF1-204ENST00000480055 DNAJC2Q99543 621 aaKnown RBP12.48□□□□□ -0.41
SMURF1-204ENST00000480055 EPAS1Q99814 870 aa12.48□□□□□ -0.41
SMURF1-204ENST00000480055 RIOK1Q9BRS2 568 aaKnown RBP12.48□□□□□ -0.41
SMURF1-204ENST00000480055 SPATC1LQ9H0A9 340 aa12.48□□□□□ -0.41
SMURF1-204ENST00000480055 IL1RAPL2Q9NP60 686 aa12.48□□□□□ -0.41
SMURF1-204ENST00000480055 PHF24Q9UPV7 400 aa12.48□□□□□ -0.41
SMURF1-204ENST00000480055 MYH4Q9Y623 1939 aa12.48□□□□□ -0.41
SMURF1-204ENST00000480055 ZNF532Q9HCE3 1301 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 A0A1W2PRG0 241 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 GOLIM4O00461 696 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 FLOT1O75955 427 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 CLTBP09497 229 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 PDE6AP16499 860 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 TLE2Q04725 743 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 HSP90AB4PQ58FF6 505 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 PRAMEF19Q5SWL8 479 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 CEP85Q6P2H3 762 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 ABRAQ8N0Z2 381 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 SPICE1Q8N0Z3 855 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 MB21D1Q8N884 522 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 SDR42E1Q8WUS8 393 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 FERMT2Q96AC1 680 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 ARHGEF10LQ9HCE6 1279 aa12.47□□□□□ -0.41
SMURF1-204ENST00000480055 KIAA0355O15063 1070 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 RAD21O60216 631 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 IFIT2P09913 472 aaKnown RBP12.46□□□□□ -0.41
SMURF1-204ENST00000480055 CYP2D6P10635 497 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 RLBP1P12271 317 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 EPHB4P54760 987 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 GABPAQ06546 454 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 TJAP1Q5JTD0 557 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 TYW1BQ6NUM6 668 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 TMEM179Q6ZVK1 233 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 AMOTL1Q8IY63 956 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 USP38Q8NB14 1042 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 ZDHHC16Q969W1 377 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 MAML3Q96JK9 1138 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 HS3ST6Q96QI5 342 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 MROH8Q9H579 483 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 SH2D4AQ9H788 454 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 SWAP70Q9UH65 585 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 NRBP1Q9UHY1 535 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 PCDHGA10Q9Y5H3 936 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 TACC3Q9Y6A5 838 aa12.46□□□□□ -0.41
SMURF1-204ENST00000480055 TCF20Q9UGU0 1960 aaKnown RBP12.45□□□□□ -0.42
SMURF1-204ENST00000480055 FCER1AP12319 257 aa12.45□□□□□ -0.42
SMURF1-204ENST00000480055 DNAJB2P25686 324 aa12.45□□□□□ -0.42
SMURF1-204ENST00000480055 GRIN2CQ14957 1233 aa12.45□□□□□ -0.42
SMURF1-204ENST00000480055 CLASRPQ8N2M8 674 aaKnown RBP12.45□□□□□ -0.42
SMURF1-204ENST00000480055 LCORLQ8N3X6 602 aa12.45□□□□□ -0.42
SMURF1-204ENST00000480055 SLC44A5Q8NCS7 719 aa12.45□□□□□ -0.42
SMURF1-204ENST00000480055 RHPN1Q8TCX5 695 aa12.45□□□□□ -0.42
SMURF1-204ENST00000480055 ATG4CQ96DT6 458 aa12.45□□□□□ -0.42
SMURF1-204ENST00000480055 DYNLL2Q96FJ2 89 aa12.45□□□□□ -0.42
SMURF1-204ENST00000480055 ARMT1Q9H993 441 aa12.45□□□□□ -0.42
SMURF1-204ENST00000480055 DCP1AQ9NPI6 582 aaPredicted RBP12.45□□□□□ -0.42
SMURF1-204ENST00000480055 XPNPEP3Q9NQH7 507 aa12.45□□□□□ -0.42
SMURF1-204ENST00000480055 A0A1W2PQ45 241 aaPredicted RBP12.44□□□□□ -0.42
SMURF1-204ENST00000480055 A0A1W2PQY0 241 aa12.44□□□□□ -0.42
SMURF1-204ENST00000480055 TNFRSF10AO00220 468 aa12.44□□□□□ -0.42
SMURF1-204ENST00000480055 RARBP10826 455 aa12.44□□□□□ -0.42
SMURF1-204ENST00000480055 HNRNPUQ00839 825 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMURF1-204ENST00000480055 ICA1Q05084 483 aa12.44□□□□□ -0.42
SMURF1-204ENST00000480055 FPGSQ05932 587 aa12.44□□□□□ -0.42
SMURF1-204ENST00000480055 KIAA1755Q5JYT7 1200 aa12.44□□□□□ -0.42
SMURF1-204ENST00000480055 CLEC10AQ8IUN9 316 aa12.44□□□□□ -0.42
SMURF1-204ENST00000480055 DDRGK1Q96HY6 314 aa12.44□□□□□ -0.42
SMURF1-204ENST00000480055 MMP19Q99542 508 aa12.44□□□□□ -0.42
SMURF1-204ENST00000480055 GTF3C3Q9Y5Q9 886 aa12.44□□□□□ -0.42
SMURF1-204ENST00000480055 LRRC37A2A6NM11 1700 aa12.44□□□□□ -0.42
SMURF1-204ENST00000480055 CHD9Q3L8U1 2897 aa12.44□□□□□ -0.42
SMURF1-204ENST00000480055 BDP1A6H8Y1 2624 aa12.43□□□□□ -0.42
SMURF1-204ENST00000480055 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.43□□□□□ -0.42
SMURF1-204ENST00000480055 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.43□□□□□ -0.42
SMURF1-204ENST00000480055 MBD4O95243 580 aa12.43□□□□□ -0.42
SMURF1-204ENST00000480055 SLC25A27O95847 323 aa12.43□□□□□ -0.42
SMURF1-204ENST00000480055 AKR1B1P15121 316 aa12.43□□□□□ -0.42
SMURF1-204ENST00000480055 RAG1P15918 1043 aa12.43□□□□□ -0.42
SMURF1-204ENST00000480055 COL9A1P20849 921 aa12.43□□□□□ -0.42
SMURF1-204ENST00000480055 KCTD2Q14681 263 aa12.43□□□□□ -0.42
SMURF1-204ENST00000480055 POTEGQ6S5H5 508 aa12.43□□□□□ -0.42
SMURF1-204ENST00000480055 ANKRD33Q7Z3H0 272 aa12.43□□□□□ -0.42
SMURF1-204ENST00000480055 RNF180Q86T96 592 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms