RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 SLC4A8Q2Y0W8 1093 aa21.63■■□□□ 1.05
TNFRSF8-204ENST00000479933 STAG2Q8N3U4 1231 aa21.63■■□□□ 1.05
TNFRSF8-204ENST00000479933 TBC1D22AQ8WUA7 517 aa21.63■■□□□ 1.05
TNFRSF8-204ENST00000479933 FAM163AQ96GL9 167 aaPredicted RBP21.63■■□□□ 1.05
TNFRSF8-204ENST00000479933 DDX60LQ5H9U9 1706 aaKnown RBP21.63■■□□□ 1.05
TNFRSF8-204ENST00000479933 USP17L3A6NCW0 530 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 USP17L4A6NCW7 530 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 LAD1O00515 517 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 ONECUT3O60422 494 aaPredicted RBP21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 BTDP43251 543 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 GRIK5Q16478 980 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 FILIP1LQ4L180 1135 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 CDKAL1Q5VV42 579 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 C16orf86Q6ZW13 317 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 USP17L1Q7RTZ2 530 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 TMEM139Q8IV31 216 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 MAPKAPK5Q8IW41 473 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 C4orf32Q8N8J7 132 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 CCDC12Q8WUD4 166 aaPredicted RBP21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 GPKOWQ92917 476 aaPredicted RBP eCLIP21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 TMEM47Q9BQJ4 181 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 BARHL2Q9NY43 387 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 PPP1R3GB7ZBB8 358 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 M0R2N6 131 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 VEGFAP15692 232 aaPredicted RBP21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 HSP90AA4PQ58FG1 418 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 SYT10Q6XYQ8 523 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 TEX11Q8IYF3 940 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 SPZ1Q9BXG8 430 aa21.62■■□□□ 1.05
TNFRSF8-204ENST00000479933 ATP8B1O43520 1251 aa21.61■■□□□ 1.05
TNFRSF8-204ENST00000479933 CD44P16070 742 aaKnown RBP21.61■■□□□ 1.05
TNFRSF8-204ENST00000479933 SEMA3FQ13275 785 aa21.61■■□□□ 1.05
TNFRSF8-204ENST00000479933 IL17AQ16552 155 aa21.61■■□□□ 1.05
TNFRSF8-204ENST00000479933 TC2NQ8N9U0 490 aa21.61■■□□□ 1.05
TNFRSF8-204ENST00000479933 SERPINB2P05120 415 aa21.61■■□□□ 1.05
TNFRSF8-204ENST00000479933 PNMA6AP0CW24 399 aaPredicted RBP21.61■■□□□ 1.05
TNFRSF8-204ENST00000479933 SMARCA1P28370 1054 aa21.61■■□□□ 1.05
TNFRSF8-204ENST00000479933 NOP2P46087 812 aaKnown RBP21.61■■□□□ 1.05
TNFRSF8-204ENST00000479933 TMC4Q7Z404 712 aa21.61■■□□□ 1.05
TNFRSF8-204ENST00000479933 NEDD1Q8NHV4 660 aa21.61■■□□□ 1.05
TNFRSF8-204ENST00000479933 SAP30BPQ9UHR5 308 aaKnown RBP21.61■■□□□ 1.05
TNFRSF8-204ENST00000479933 STX8Q9UNK0 236 aa21.61■■□□□ 1.05
TNFRSF8-204ENST00000479933 GYS1P13807 737 aa21.6■■□□□ 1.05
TNFRSF8-204ENST00000479933 HOXA10P31260 410 aaPredicted RBP21.6■■□□□ 1.05
TNFRSF8-204ENST00000479933 CDK8P49336 464 aa21.6■■□□□ 1.05
TNFRSF8-204ENST00000479933 WWC2Q6AWC2 1192 aa21.6■■□□□ 1.05
TNFRSF8-204ENST00000479933 KLHL10Q6JEL2 608 aa21.6■■□□□ 1.05
TNFRSF8-204ENST00000479933 DTHD1Q6ZMT9 781 aa21.6■■□□□ 1.05
TNFRSF8-204ENST00000479933 LRRC4BQ9NT99 713 aa21.6■■□□□ 1.05
TNFRSF8-204ENST00000479933 PCDHA6Q9UN73 950 aa21.6■■□□□ 1.05
TNFRSF8-204ENST00000479933 PCDHA8Q9Y5H6 950 aa21.6■■□□□ 1.05
TNFRSF8-204ENST00000479933 FAM205AQ6ZU69 1335 aa21.6■■□□□ 1.05
TNFRSF8-204ENST00000479933 STXBP3O00186 592 aa21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 ZRANB2O95218 330 aaKnown RBP eCLIP21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 PRPHP41219 470 aa21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 PLA2G4AP47712 749 aa21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 SPAG1Q07617 926 aa21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 HEATR3Q7Z4Q2 680 aa21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 REXO1L1PQ8IX06 675 aa21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 PANX2Q96RD6 677 aa21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 CRAMP1Q96RY5 1269 aa21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 EYA3Q99504 573 aa21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 UBXN6Q9BZV1 441 aa21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 RWDD2AQ9UIY3 292 aa21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 PPP2R2CQ9Y2T4 447 aa21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 MYH1P12882 1939 aa21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 MYL1P05976 194 aa21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 HMGB2P26583 209 aaKnown RBP21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 SLC27A3Q5K4L6 730 aa21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 ZNF658Q5TYW1 1059 aaPredicted RBP21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 MEX3CQ5U5Q3 659 aaKnown RBP21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 APTXQ7Z2E3 356 aaKnown RBP21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 GPR101Q96P66 508 aaPredicted RBP21.59■■□□□ 1.05
TNFRSF8-204ENST00000479933 AKR1B15C9JRZ8 316 aaPredicted RBP21.58■■□□□ 1.05
TNFRSF8-204ENST00000479933 KLRF2D3W0D1 207 aa21.58■■□□□ 1.05
TNFRSF8-204ENST00000479933 CASP1P29466 404 aa21.58■■□□□ 1.05
TNFRSF8-204ENST00000479933 STAT6P42226 847 aa21.58■■□□□ 1.05
TNFRSF8-204ENST00000479933 MAPK8IP2Q13387 824 aaPredicted RBP21.58■■□□□ 1.05
TNFRSF8-204ENST00000479933 PPFIBP1Q86W92 1011 aa21.58■■□□□ 1.05
TNFRSF8-204ENST00000479933 SLC44A5Q8NCS7 719 aa21.58■■□□□ 1.05
TNFRSF8-204ENST00000479933 NAA15Q9BXJ9 866 aaKnown RBP21.58■■□□□ 1.05
TNFRSF8-204ENST00000479933 ADD3Q9UEY8 706 aaKnown RBP21.58■■□□□ 1.05
TNFRSF8-204ENST00000479933 V9GYY5 206 aaPredicted RBP21.58■■□□□ 1.05
TNFRSF8-204ENST00000479933 GAKO14976 1311 aa21.58■■□□□ 1.05
TNFRSF8-204ENST00000479933 SNED1Q8TER0 1413 aa21.58■■□□□ 1.05
TNFRSF8-204ENST00000479933 ADAMTS3O15072 1205 aa21.58■■□□□ 1.04
TNFRSF8-204ENST00000479933 CYTH3O43739 400 aa21.58■■□□□ 1.04
TNFRSF8-204ENST00000479933 PARP1P09874 1014 aaKnown RBP21.58■■□□□ 1.04
TNFRSF8-204ENST00000479933 TNNT3P45378 269 aaPredicted RBP21.58■■□□□ 1.04
TNFRSF8-204ENST00000479933 CLCN6P51797 869 aa21.58■■□□□ 1.04
TNFRSF8-204ENST00000479933 STX17P56962 302 aa21.58■■□□□ 1.04
TNFRSF8-204ENST00000479933 CCDC93Q567U6 631 aa21.58■■□□□ 1.04
TNFRSF8-204ENST00000479933 RRAGBQ5VZM2 374 aa21.58■■□□□ 1.04
TNFRSF8-204ENST00000479933 ANKRD20A12PQ8NF67 263 aa21.58■■□□□ 1.04
TNFRSF8-204ENST00000479933 ZFP91Q96JP5 570 aaPredicted RBP21.58■■□□□ 1.04
TNFRSF8-204ENST00000479933 SRRTQ9BXP5 876 aaKnown RBP21.58■■□□□ 1.04
TNFRSF8-204ENST00000479933 FLT1P17948 1338 aa21.58■■□□□ 1.04
TNFRSF8-204ENST00000479933 FOCADQ5VW36 1801 aa21.58■■□□□ 1.04
TNFRSF8-204ENST00000479933 MMP14P50281 582 aa21.57■■□□□ 1.04
TNFRSF8-204ENST00000479933 MFSD14BQ5SR56 506 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms