RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 HDAC5Q9UQL6 1122 aa13.63□□□□□ -0.23
CCDC18-208ENST00000479653 SIPA1L1O43166 1804 aa13.62□□□□□ -0.23
CCDC18-208ENST00000479653 PRRC2BQ5JSZ5 2229 aaKnown RBP13.62□□□□□ -0.23
CCDC18-208ENST00000479653 EPOPA6NHQ4 379 aa13.62□□□□□ -0.23
CCDC18-208ENST00000479653 ALADP13716 330 aa13.62□□□□□ -0.23
CCDC18-208ENST00000479653 CYP7A1P22680 504 aa13.62□□□□□ -0.23
CCDC18-208ENST00000479653 MIGA1Q8NAN2 632 aa13.62□□□□□ -0.23
CCDC18-208ENST00000479653 EHD4Q9H223 541 aa13.62□□□□□ -0.23
CCDC18-208ENST00000479653 ROBO3Q96MS0 1386 aa13.61□□□□□ -0.23
CCDC18-208ENST00000479653 SRGAP3O43295 1099 aa13.61□□□□□ -0.23
CCDC18-208ENST00000479653 CD4P01730 458 aa13.61□□□□□ -0.23
CCDC18-208ENST00000479653 CST5P28325 142 aaPredicted RBP13.61□□□□□ -0.23
CCDC18-208ENST00000479653 SHMT1P34896 483 aa13.61□□□□□ -0.23
CCDC18-208ENST00000479653 KIAA1755Q5JYT7 1200 aa13.61□□□□□ -0.23
CCDC18-208ENST00000479653 TTC39AQ5SRH9 613 aa13.61□□□□□ -0.23
CCDC18-208ENST00000479653 SSH1Q8WYL5 1049 aa13.61□□□□□ -0.23
CCDC18-208ENST00000479653 WDFY4Q6ZS81 3184 aa13.61□□□□□ -0.23
CCDC18-208ENST00000479653 ZNF236Q9UL36 1845 aa13.61□□□□□ -0.23
CCDC18-208ENST00000479653 SMCHD1A6NHR9 2005 aa13.61□□□□□ -0.23
CCDC18-208ENST00000479653 CACNA1AO00555 2505 aa13.6□□□□□ -0.23
CCDC18-208ENST00000479653 SNAI1O95863 264 aaPredicted RBP13.6□□□□□ -0.23
CCDC18-208ENST00000479653 STAT3P40763 770 aa13.6□□□□□ -0.23
CCDC18-208ENST00000479653 PLCD1P51178 756 aa13.6□□□□□ -0.23
CCDC18-208ENST00000479653 DDX11Q96FC9 970 aa13.6□□□□□ -0.23
CCDC18-208ENST00000479653 SCLYQ96I15 445 aa13.6□□□□□ -0.23
CCDC18-208ENST00000479653 CYP2E1P05181 493 aaPredicted RBP13.59□□□□□ -0.23
CCDC18-208ENST00000479653 POLR3DP05423 398 aaPredicted RBP13.59□□□□□ -0.23
CCDC18-208ENST00000479653 GRB10Q13322 594 aa13.59□□□□□ -0.23
CCDC18-208ENST00000479653 ACVR2BQ13705 512 aa13.59□□□□□ -0.23
CCDC18-208ENST00000479653 RIOX2Q8IUF8 465 aa13.59□□□□□ -0.23
CCDC18-208ENST00000479653 MSL3Q8N5Y2 521 aaKnown RBP13.59□□□□□ -0.23
CCDC18-208ENST00000479653 SLC4A3P48751 1232 aa13.58□□□□□ -0.24
CCDC18-208ENST00000479653 GJA9P57773 515 aa13.58□□□□□ -0.24
CCDC18-208ENST00000479653 BEX3Q00994 111 aa13.58□□□□□ -0.24
CCDC18-208ENST00000479653 TTLL4Q14679 1199 aa13.58□□□□□ -0.24
CCDC18-208ENST00000479653 CCDC144BQ3MJ40 725 aa13.58□□□□□ -0.24
CCDC18-208ENST00000479653 CCDC158Q5M9N0 1113 aa13.58□□□□□ -0.24
CCDC18-208ENST00000479653 CXCL17Q6UXB2 119 aa13.58□□□□□ -0.24
CCDC18-208ENST00000479653 NOL8Q76FK4 1167 aaKnown RBP13.58□□□□□ -0.24
CCDC18-208ENST00000479653 DEFB128Q7Z7B8 93 aa13.58□□□□□ -0.24
CCDC18-208ENST00000479653 FAM178BQ8IXR5 827 aa13.58□□□□□ -0.24
CCDC18-208ENST00000479653 TRPV6Q9H1D0 765 aa13.58□□□□□ -0.24
CCDC18-208ENST00000479653 WNT8AQ9H1J5 351 aa13.58□□□□□ -0.24
CCDC18-208ENST00000479653 KCNH6Q9H252 994 aa13.58□□□□□ -0.24
CCDC18-208ENST00000479653 LRRC37A2A6NM11 1700 aa13.58□□□□□ -0.24
CCDC18-208ENST00000479653 KIF28PB7ZC32 967 aa13.57□□□□□ -0.24
CCDC18-208ENST00000479653 ADCY6O43306 1168 aa13.57□□□□□ -0.24
CCDC18-208ENST00000479653 ZAP70P43403 619 aa13.57□□□□□ -0.24
CCDC18-208ENST00000479653 TAP1Q03518 808 aa13.57□□□□□ -0.24
CCDC18-208ENST00000479653 ITGA7Q13683 1181 aa13.57□□□□□ -0.24
CCDC18-208ENST00000479653 NOC4LQ9BVI4 516 aaKnown RBP13.57□□□□□ -0.24
CCDC18-208ENST00000479653 ARHGEF10LQ9HCE6 1279 aa13.57□□□□□ -0.24
CCDC18-208ENST00000479653 MRS2Q9HD23 443 aa13.57□□□□□ -0.24
CCDC18-208ENST00000479653 PIH1D3Q9NQM4 214 aaKnown RBP13.57□□□□□ -0.24
CCDC18-208ENST00000479653 RAD21O60216 631 aa13.56□□□□□ -0.24
CCDC18-208ENST00000479653 IDH1O75874 414 aaKnown RBP13.56□□□□□ -0.24
CCDC18-208ENST00000479653 G3BP1Q13283 466 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC18-208ENST00000479653 MAMDC4Q6UXC1 1216 aa13.56□□□□□ -0.24
CCDC18-208ENST00000479653 CERS3Q8IU89 383 aa13.56□□□□□ -0.24
CCDC18-208ENST00000479653 MEIS3Q99687 375 aa13.56□□□□□ -0.24
CCDC18-208ENST00000479653 UPF3AQ9H1J1 476 aaKnown RBP13.56□□□□□ -0.24
CCDC18-208ENST00000479653 VCPKMTQ9H867 229 aa13.56□□□□□ -0.24
CCDC18-208ENST00000479653 FBXO28Q9NVF7 368 aa13.56□□□□□ -0.24
CCDC18-208ENST00000479653 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.56□□□□□ -0.24
CCDC18-208ENST00000479653 TMX2Q9Y320 296 aa13.56□□□□□ -0.24
CCDC18-208ENST00000479653 VWA5AO00534 786 aa13.55□□□□□ -0.24
CCDC18-208ENST00000479653 WDR46O15213 610 aaKnown RBP13.55□□□□□ -0.24
CCDC18-208ENST00000479653 B4GALT4O60513 344 aa13.55□□□□□ -0.24
CCDC18-208ENST00000479653 ARHGEF15O94989 841 aa13.55□□□□□ -0.24
CCDC18-208ENST00000479653 ACTN1P12814 892 aa13.55□□□□□ -0.24
CCDC18-208ENST00000479653 KCNA5P22460 613 aa13.55□□□□□ -0.24
CCDC18-208ENST00000479653 COPB2P35606 906 aa13.55□□□□□ -0.24
CCDC18-208ENST00000479653 TMEM179Q6ZVK1 233 aa13.55□□□□□ -0.24
CCDC18-208ENST00000479653 CLEC10AQ8IUN9 316 aa13.55□□□□□ -0.24
CCDC18-208ENST00000479653 MAGEB6Q8N7X4 407 aa13.55□□□□□ -0.24
CCDC18-208ENST00000479653 SLC43A3Q8NBI5 491 aa13.55□□□□□ -0.24
CCDC18-208ENST00000479653 PHOX2BQ99453 314 aa13.55□□□□□ -0.24
CCDC18-208ENST00000479653 ABHD16BQ9H3Z7 469 aa13.55□□□□□ -0.24
CCDC18-208ENST00000479653 SH2D4AQ9H788 454 aa13.55□□□□□ -0.24
CCDC18-208ENST00000479653 UBE2ZQ9H832 354 aaPredicted RBP13.55□□□□□ -0.24
CCDC18-208ENST00000479653 ADAMTS5Q9UNA0 930 aa13.55□□□□□ -0.24
CCDC18-208ENST00000479653 DCXO43602 365 aa13.54□□□□□ -0.24
CCDC18-208ENST00000479653 ST18O60284 1047 aa13.54□□□□□ -0.24
CCDC18-208ENST00000479653 LPXNO60711 386 aa13.54□□□□□ -0.24
CCDC18-208ENST00000479653 CABYRO75952 493 aa13.54□□□□□ -0.24
CCDC18-208ENST00000479653 PFKMP08237 780 aa13.54□□□□□ -0.24
CCDC18-208ENST00000479653 IL9P15248 144 aa13.54□□□□□ -0.24
CCDC18-208ENST00000479653 ICA1Q05084 483 aa13.54□□□□□ -0.24
CCDC18-208ENST00000479653 SIAH1Q8IUQ4 282 aa13.54□□□□□ -0.24
CCDC18-208ENST00000479653 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.54□□□□□ -0.24
CCDC18-208ENST00000479653 PHOSPHO2Q8TCD6 241 aa13.54□□□□□ -0.24
CCDC18-208ENST00000479653 ANKS1AQ92625 1134 aa13.54□□□□□ -0.24
CCDC18-208ENST00000479653 VWCEQ96DN2 955 aa13.54□□□□□ -0.24
CCDC18-208ENST00000479653 SLC9A7Q96T83 725 aa13.54□□□□□ -0.24
CCDC18-208ENST00000479653 DBNDD2Q9BQY9 259 aa13.54□□□□□ -0.24
CCDC18-208ENST00000479653 SMC4Q9NTJ3 1288 aa13.54□□□□□ -0.24
CCDC18-208ENST00000479653 MCM9Q9NXL9 1143 aa13.54□□□□□ -0.24
CCDC18-208ENST00000479653 ZNF214Q9UL59 606 aaPredicted RBP13.54□□□□□ -0.24
CCDC18-208ENST00000479653 CTAGE5O15320 804 aa13.53□□□□□ -0.24
CCDC18-208ENST00000479653 IGSF3O75054 1194 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms