RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 IFIT2P09913 472 aaKnown RBP7.52□□□□□ -1.21
SF3B1-209ENST00000479532 HIBADHP31937 336 aaKnown RBP7.52□□□□□ -1.21
SF3B1-209ENST00000479532 PSMA6P60900 246 aaKnown RBP7.52□□□□□ -1.21
SF3B1-209ENST00000479532 CTBSQ01459 385 aa7.52□□□□□ -1.21
SF3B1-209ENST00000479532 TNNI3KQ59H18 835 aa7.52□□□□□ -1.21
SF3B1-209ENST00000479532 EFHC2Q5JST6 749 aa7.52□□□□□ -1.21
SF3B1-209ENST00000479532 CCDC158Q5M9N0 1113 aa7.52□□□□□ -1.21
SF3B1-209ENST00000479532 C9orf131Q5VYM1 1079 aa7.52□□□□□ -1.21
SF3B1-209ENST00000479532 C15orf52Q6ZUT6 534 aaKnown RBP7.52□□□□□ -1.21
SF3B1-209ENST00000479532 VGLL2Q8N8G2 317 aa7.52□□□□□ -1.21
SF3B1-209ENST00000479532 HELQQ8TDG4 1101 aa7.52□□□□□ -1.21
SF3B1-209ENST00000479532 ABHD17AQ96GS6 310 aa7.52□□□□□ -1.21
SF3B1-209ENST00000479532 GPATCH3Q96I76 525 aa7.52□□□□□ -1.21
SF3B1-209ENST00000479532 CCDC136Q96JN2 1154 aa7.52□□□□□ -1.21
SF3B1-209ENST00000479532 C2orf49Q9BVC5 232 aaPredicted RBP7.52□□□□□ -1.21
SF3B1-209ENST00000479532 IQSEC3Q9UPP2 1182 aaPredicted RBP7.52□□□□□ -1.21
SF3B1-209ENST00000479532 FPGT-TNNI3KV9GXZ4 949 aa7.52□□□□□ -1.21
SF3B1-209ENST00000479532 CDK2AP1O14519 115 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 PAX4O43316 350 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 ECE2O60344 883 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 SASH1O94885 1247 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 ARAFP10398 606 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 FGFR2P21802 821 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 PHKA2P46019 1235 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 RBM25P49756 843 aaKnown RBP7.51□□□□□ -1.21
SF3B1-209ENST00000479532 CENPCQ03188 943 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 LBRQ14739 615 aaKnown RBP7.51□□□□□ -1.21
SF3B1-209ENST00000479532 TNIP1Q15025 636 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 PRRT3Q5FWE3 981 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 TTC39AQ5SRH9 613 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 LCE1DQ5T752 114 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 ANKRD45Q5TZF3 282 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 DNAJC14Q6Y2X3 702 aaPredicted RBP7.51□□□□□ -1.21
SF3B1-209ENST00000479532 AACSQ86V21 672 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 STAG2Q8N3U4 1231 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 GPR101Q96P66 508 aaPredicted RBP7.51□□□□□ -1.21
SF3B1-209ENST00000479532 DBNDD1Q9H9R9 158 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 ZNRF3Q9ULT6 936 aa7.51□□□□□ -1.21
SF3B1-209ENST00000479532 A0A1B0GTH6 734 aa7.5□□□□□ -1.21
SF3B1-209ENST00000479532 SPDYE3A6NKU9 549 aa7.5□□□□□ -1.21
SF3B1-209ENST00000479532 UQCRFS1P1P0C7P4 283 aa7.5□□□□□ -1.21
SF3B1-209ENST00000479532 TIMM10P62072 90 aa7.5□□□□□ -1.21
SF3B1-209ENST00000479532 C16orf46Q6P387 395 aa7.5□□□□□ -1.21
SF3B1-209ENST00000479532 CENPQQ7L2Z9 268 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-209ENST00000479532 SLC51AQ86UW1 340 aa7.5□□□□□ -1.21
SF3B1-209ENST00000479532 SAP130Q9H0E3 1048 aa7.5□□□□□ -1.21
SF3B1-209ENST00000479532 CD209Q9NNX6 404 aa7.5□□□□□ -1.21
SF3B1-209ENST00000479532 IL1RAPL2Q9NP60 686 aa7.5□□□□□ -1.21
SF3B1-209ENST00000479532 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.5□□□□□ -1.219e-8■■□□□ 13.7
SF3B1-209ENST00000479532 PPP4R2Q9NY27 417 aa7.5□□□□□ -1.21
SF3B1-209ENST00000479532 DENND2AQ9ULE3 1009 aa7.5□□□□□ -1.21
SF3B1-209ENST00000479532 PSME4Q14997 1843 aa7.5□□□□□ -1.21
SF3B1-209ENST00000479532 KDM2BQ8NHM5 1336 aa7.5□□□□□ -1.21
SF3B1-209ENST00000479532 MYO3BQ8WXR4 1341 aa7.5□□□□□ -1.21
SF3B1-209ENST00000479532 FZD9O00144 591 aa7.49□□□□□ -1.21
SF3B1-209ENST00000479532 SNAP23O00161 211 aa7.49□□□□□ -1.21
SF3B1-209ENST00000479532 IL1R1P14778 569 aa7.49□□□□□ -1.21
SF3B1-209ENST00000479532 GYG1P46976 350 aa7.49□□□□□ -1.21
SF3B1-209ENST00000479532 ECM1Q16610 540 aa7.49□□□□□ -1.21
SF3B1-209ENST00000479532 CIAPIN1Q6FI81 312 aa7.49□□□□□ -1.21
SF3B1-209ENST00000479532 SMC5Q8IY18 1101 aa7.49□□□□□ -1.21
SF3B1-209ENST00000479532 ZGPATQ8N5A5 531 aaKnown RBP7.49□□□□□ -1.21
SF3B1-209ENST00000479532 TBC1D22AQ8WUA7 517 aa7.49□□□□□ -1.21
SF3B1-209ENST00000479532 TRIM11Q96F44 468 aa7.49□□□□□ -1.21
SF3B1-209ENST00000479532 FAM84BQ96KN1 310 aaPredicted RBP7.49□□□□□ -1.21
SF3B1-209ENST00000479532 CCDC8Q9H0W5 538 aaPredicted RBP7.49□□□□□ -1.21
SF3B1-209ENST00000479532 RUBCNLQ9H714 662 aa7.49□□□□□ -1.21
SF3B1-209ENST00000479532 SERTM1A2A2V5 107 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 EML1O00423 815 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 ERC2O15083 957 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 SMARCA5O60264 1052 aaPredicted RBP7.48□□□□□ -1.21
SF3B1-209ENST00000479532 RAD17O75943 681 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 IGHDP01880 384 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 RPS12P25398 132 aaKnown RBP7.48□□□□□ -1.21
SF3B1-209ENST00000479532 KLRK1P26718 216 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 ADORA1P30542 326 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 ARHGAP4P98171 946 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 CHAF1AQ13111 956 aaPredicted RBP7.48□□□□□ -1.21
SF3B1-209ENST00000479532 NOM1Q5C9Z4 860 aaKnown RBP7.48□□□□□ -1.21
SF3B1-209ENST00000479532 SH3PXD2AQ5TCZ1 1133 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 STRIP1Q5VSL9 837 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 MCTP1Q6DN14 999 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 TTLL5Q6EMB2 1281 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 FBXO33Q7Z6M2 555 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 TXNRD3Q86VQ6 643 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 CHD1LQ86WJ1 897 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 GPC2Q8N158 579 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 TDRD7Q8NHU6 1098 aaKnown RBP7.48□□□□□ -1.21
SF3B1-209ENST00000479532 WDR66Q8TBY9 1149 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 ZDHHC1Q8WTX9 485 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 EAF2Q96CJ1 260 aaPredicted RBP7.48□□□□□ -1.21
SF3B1-209ENST00000479532 ZSCAN10Q96SZ4 725 aaPredicted RBP7.48□□□□□ -1.21
SF3B1-209ENST00000479532 DBNDD2Q9BQY9 259 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 ZNF232Q9UNY5 417 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 GJA3Q9Y6H8 435 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 IRS2Q9Y4H2 1338 aa7.48□□□□□ -1.21
SF3B1-209ENST00000479532 GLTPD2A6NH11 291 aa7.47□□□□□ -1.21
SF3B1-209ENST00000479532 WTIPA6NIX2 430 aaPredicted RBP7.47□□□□□ -1.21
SF3B1-209ENST00000479532 ERCC3P19447 782 aa7.47□□□□□ -1.21
SF3B1-209ENST00000479532 MPSTP25325 297 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms