RNA–Protein interactions for RNA: ENST00000478768.2

SNAP47-208, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 3

Gene SNAP47, Length 870 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-208ENST00000478768 TMEM57Q8N5G2 664 aa12.14□□□□□ -0.47
SNAP47-208ENST00000478768 PPP1R12CQ9BZL4 782 aa12.14□□□□□ -0.47
SNAP47-208ENST00000478768 MSRAQ9UJ68 235 aa12.14□□□□□ -0.47
SNAP47-208ENST00000478768 ELP1O95163 1332 aa12.13□□□□□ -0.47
SNAP47-208ENST00000478768 SYNGAP1Q96PV0 1343 aa12.13□□□□□ -0.47
SNAP47-208ENST00000478768 CHD7Q9P2D1 2997 aa12.13□□□□□ -0.47
SNAP47-208ENST00000478768 DUSP11O75319 330 aaKnown RBP12.13□□□□□ -0.47
SNAP47-208ENST00000478768 SNAI1O95863 264 aaPredicted RBP12.13□□□□□ -0.47
SNAP47-208ENST00000478768 C6orf222P0C671 652 aaPredicted RBP12.13□□□□□ -0.47
SNAP47-208ENST00000478768 PDE6AP16499 860 aa12.13□□□□□ -0.47
SNAP47-208ENST00000478768 CST5P28325 142 aaPredicted RBP12.13□□□□□ -0.47
SNAP47-208ENST00000478768 COPB2P35606 906 aa12.13□□□□□ -0.47
SNAP47-208ENST00000478768 RAB30Q15771 203 aa12.13□□□□□ -0.47
SNAP47-208ENST00000478768 LCORLQ8N3X6 602 aa12.13□□□□□ -0.47
SNAP47-208ENST00000478768 MSL3Q8N5Y2 521 aaKnown RBP12.13□□□□□ -0.47
SNAP47-208ENST00000478768 VTI1AQ96AJ9 217 aa12.13□□□□□ -0.47
SNAP47-208ENST00000478768 NECAB3Q96P71 396 aaPredicted RBP12.13□□□□□ -0.47
SNAP47-208ENST00000478768 NKX2-4Q9H2Z4 354 aa12.13□□□□□ -0.47
SNAP47-208ENST00000478768 ZHX1Q9UKY1 873 aaPredicted RBP12.13□□□□□ -0.47
SNAP47-208ENST00000478768 PPP1R9AQ9ULJ8 1098 aa12.13□□□□□ -0.47
SNAP47-208ENST00000478768 ZNF532Q9HCE3 1301 aa12.12□□□□□ -0.47
SNAP47-208ENST00000478768 XIRP2A4UGR9 3374 aa12.12□□□□□ -0.47
SNAP47-208ENST00000478768 A0A0U1RQG5 324 aaPredicted RBP12.12□□□□□ -0.47
SNAP47-208ENST00000478768 ADCY6O43306 1168 aa12.12□□□□□ -0.47
SNAP47-208ENST00000478768 ASGR1P07306 291 aa12.12□□□□□ -0.47
SNAP47-208ENST00000478768 EEF2P13639 858 aaKnown RBP12.12□□□□□ -0.47
SNAP47-208ENST00000478768 TTF1Q15361 905 aaPredicted RBP12.12□□□□□ -0.47
SNAP47-208ENST00000478768 MAMDC4Q6UXC1 1216 aa12.12□□□□□ -0.47
SNAP47-208ENST00000478768 AACSQ86V21 672 aa12.12□□□□□ -0.47
SNAP47-208ENST00000478768 FAM126BQ8IXS8 530 aa12.12□□□□□ -0.47
SNAP47-208ENST00000478768 PCSK9Q8NBP7 692 aaKnown RBP12.12□□□□□ -0.47
SNAP47-208ENST00000478768 REPS2Q8NFH8 660 aa12.12□□□□□ -0.47
SNAP47-208ENST00000478768 CCDC17Q96LX7 622 aa12.12□□□□□ -0.47
SNAP47-208ENST00000478768 SLC28A3Q9HAS3 691 aa12.12□□□□□ -0.47
SNAP47-208ENST00000478768 GOPCQ9HD26 462 aa12.12□□□□□ -0.47
SNAP47-208ENST00000478768 CXXC1Q9P0U4 656 aaPredicted RBP12.12□□□□□ -0.47
SNAP47-208ENST00000478768 BDP1A6H8Y1 2624 aa12.11□□□□□ -0.47
SNAP47-208ENST00000478768 TCRBV5S4A2TA0A5A2 114 aa12.11□□□□□ -0.47
SNAP47-208ENST00000478768 SMIM22K7EJ46 135 aa12.11□□□□□ -0.47
SNAP47-208ENST00000478768 ARVCFO00192 962 aa12.11□□□□□ -0.47
SNAP47-208ENST00000478768 TLR3O15455 904 aaKnown RBP12.11□□□□□ -0.47
SNAP47-208ENST00000478768 RAD21O60216 631 aa12.11□□□□□ -0.47
SNAP47-208ENST00000478768 CYP2C18P33260 490 aa12.11□□□□□ -0.47
SNAP47-208ENST00000478768 CDK8P49336 464 aa12.11□□□□□ -0.47
SNAP47-208ENST00000478768 FAM83BQ5T0W9 1011 aa12.11□□□□□ -0.47
SNAP47-208ENST00000478768 HERVK_113Q902F9 699 aa12.11□□□□□ -0.47
SNAP47-208ENST00000478768 DDX11Q96FC9 970 aa12.11□□□□□ -0.47
SNAP47-208ENST00000478768 C1QTNF1Q9BXJ1 281 aa12.11□□□□□ -0.47
SNAP47-208ENST00000478768 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
SNAP47-208ENST00000478768 ARMT1Q9H993 441 aa12.11□□□□□ -0.47
SNAP47-208ENST00000478768 SPC25Q9HBM1 224 aa12.11□□□□□ -0.47
SNAP47-208ENST00000478768 IL23AQ9NPF7 189 aa12.11□□□□□ -0.47
SNAP47-208ENST00000478768 YBX2Q9Y2T7 364 aaKnown RBP12.11□□□□□ -0.47
SNAP47-208ENST00000478768 GREB1LQ9C091 1923 aaPredicted RBP12.11□□□□□ -0.47
SNAP47-208ENST00000478768 DNAJC25-GNG10A0A024R161 153 aa12.1□□□□□ -0.47
SNAP47-208ENST00000478768 CYP2D7A0A087X1C5 515 aa12.1□□□□□ -0.47
SNAP47-208ENST00000478768 PRKAB2O43741 272 aa12.1□□□□□ -0.47
SNAP47-208ENST00000478768 FGBP02675 491 aa12.1□□□□□ -0.47
SNAP47-208ENST00000478768 BMP1P13497 986 aa12.1□□□□□ -0.47
SNAP47-208ENST00000478768 HOXD11P31277 338 aaPredicted RBP12.1□□□□□ -0.47
SNAP47-208ENST00000478768 GJA9P57773 515 aa12.1□□□□□ -0.47
SNAP47-208ENST00000478768 TFF2Q03403 129 aa12.1□□□□□ -0.47
SNAP47-208ENST00000478768 ACVR2BQ13705 512 aa12.1□□□□□ -0.47
SNAP47-208ENST00000478768 CCDC144BQ3MJ40 725 aa12.1□□□□□ -0.47
SNAP47-208ENST00000478768 GNASQ5JWF2 1037 aa12.1□□□□□ -0.47
SNAP47-208ENST00000478768 ZKSCAN2Q63HK3 967 aa12.1□□□□□ -0.47
SNAP47-208ENST00000478768 SNRNP48Q6IEG0 339 aaKnown RBP12.1□□□□□ -0.47
SNAP47-208ENST00000478768 ZNF467Q7Z7K2 595 aaPredicted RBP12.1□□□□□ -0.47
SNAP47-208ENST00000478768 MICALL1Q8N3F8 863 aa12.1□□□□□ -0.47
SNAP47-208ENST00000478768 TEX13BQ9BXU2 312 aa12.1□□□□□ -0.47
SNAP47-208ENST00000478768 UPF3AQ9H1J1 476 aaKnown RBP12.1□□□□□ -0.47
SNAP47-208ENST00000478768 MTIF3Q9H2K0 278 aaKnown RBP12.1□□□□□ -0.47
SNAP47-208ENST00000478768 KANSL2Q9H9L4 492 aa12.1□□□□□ -0.47
SNAP47-208ENST00000478768 RIPK3Q9Y572 518 aa12.1□□□□□ -0.47
SNAP47-208ENST00000478768 GOLIM4O00461 696 aa12.09□□□□□ -0.47
SNAP47-208ENST00000478768 CD4P01730 458 aa12.09□□□□□ -0.47
SNAP47-208ENST00000478768 C12orf60Q5U649 245 aa12.09□□□□□ -0.47
SNAP47-208ENST00000478768 C16orf86Q6ZW13 317 aa12.09□□□□□ -0.47
SNAP47-208ENST00000478768 OTOP2Q7RTS6 562 aa12.09□□□□□ -0.47
SNAP47-208ENST00000478768 ERC1Q8IUD2 1116 aa12.09□□□□□ -0.47
SNAP47-208ENST00000478768 DNAJC2Q99543 621 aaKnown RBP12.09□□□□□ -0.47
SNAP47-208ENST00000478768 NUP88Q99567 741 aaPredicted RBP12.09□□□□□ -0.47
SNAP47-208ENST00000478768 SLF1Q9BQI6 1058 aa12.09□□□□□ -0.47
SNAP47-208ENST00000478768 ABHD16BQ9H3Z7 469 aa12.09□□□□□ -0.47
SNAP47-208ENST00000478768 HIPK3Q9H422 1215 aa12.09□□□□□ -0.47
SNAP47-208ENST00000478768 IL1RAPL2Q9NP60 686 aa12.09□□□□□ -0.47
SNAP47-208ENST00000478768 ATP8A2Q9NTI2 1148 aa12.09□□□□□ -0.47
SNAP47-208ENST00000478768 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.09□□□□□ -0.47
SNAP47-208ENST00000478768 EXOC6BQ9Y2D4 811 aa12.09□□□□□ -0.47
SNAP47-208ENST00000478768 MYH7P12883 1935 aa12.09□□□□□ -0.47
SNAP47-208ENST00000478768 MYH4Q9Y623 1939 aa12.09□□□□□ -0.47
SNAP47-208ENST00000478768 UMODL1Q5DID0 1318 aa12.09□□□□□ -0.47
SNAP47-208ENST00000478768 USP17L12C9JPN9 530 aa12.08□□□□□ -0.48
SNAP47-208ENST00000478768 USP17L21D6R901 530 aa12.08□□□□□ -0.48
SNAP47-208ENST00000478768 CTAGE5O15320 804 aa12.08□□□□□ -0.48
SNAP47-208ENST00000478768 MBD4O95243 580 aa12.08□□□□□ -0.48
SNAP47-208ENST00000478768 SLC4A3P48751 1232 aa12.08□□□□□ -0.48
SNAP47-208ENST00000478768 KCNQ1P51787 676 aa12.08□□□□□ -0.48
SNAP47-208ENST00000478768 RABGGTBP53611 331 aa12.08□□□□□ -0.48
SNAP47-208ENST00000478768 AAK1Q2M2I8 961 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms