RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 TMEM130Q8N3G9 435 aa8.05□□□□□ -1.12
HOXB3-209ENST00000478644 IL22RA1Q8N6P7 574 aa8.05□□□□□ -1.12
HOXB3-209ENST00000478644 CCDC191Q8NCU4 936 aa8.05□□□□□ -1.12
HOXB3-209ENST00000478644 DPF2Q92785 391 aa8.05□□□□□ -1.12
HOXB3-209ENST00000478644 HHIPL1Q96JK4 782 aa8.05□□□□□ -1.12
HOXB3-209ENST00000478644 ISCA1Q9BUE6 129 aa8.05□□□□□ -1.12
HOXB3-209ENST00000478644 LAS1LQ9Y4W2 734 aaKnown RBP8.05□□□□□ -1.12
HOXB3-209ENST00000478644 SNED1Q8TER0 1413 aa8.04□□□□□ -1.12
HOXB3-209ENST00000478644 RASSF10A6NK89 507 aa8.04□□□□□ -1.12
HOXB3-209ENST00000478644 H7C1D1 291 aa8.04□□□□□ -1.12
HOXB3-209ENST00000478644 NEXNQ0ZGT2 675 aa8.04□□□□□ -1.12
HOXB3-209ENST00000478644 SETDB1Q15047 1291 aa8.04□□□□□ -1.12
HOXB3-209ENST00000478644 NOM1Q5C9Z4 860 aaKnown RBP8.04□□□□□ -1.12
HOXB3-209ENST00000478644 DUSP27Q5VZP5 1158 aa8.04□□□□□ -1.12
HOXB3-209ENST00000478644 CIAPIN1Q6FI81 312 aa8.04□□□□□ -1.12
HOXB3-209ENST00000478644 CEP120Q8N960 986 aa8.04□□□□□ -1.12
HOXB3-209ENST00000478644 ZBTB38Q8NAP3 1195 aaPredicted RBP8.04□□□□□ -1.12
HOXB3-209ENST00000478644 GTF3C2Q8WUA4 911 aaPredicted RBP8.04□□□□□ -1.12
HOXB3-209ENST00000478644 WFDC12Q8WWY7 111 aa8.04□□□□□ -1.12
HOXB3-209ENST00000478644 ELP3Q9H9T3 547 aa8.04□□□□□ -1.12
HOXB3-209ENST00000478644 PRDM10Q9NQV6 1147 aa8.04□□□□□ -1.12
HOXB3-209ENST00000478644 CHPF2Q9P2E5 772 aa8.04□□□□□ -1.12
HOXB3-209ENST00000478644 PGAP2Q9UHJ9 254 aa8.04□□□□□ -1.12
HOXB3-209ENST00000478644 CNTNAP1P78357 1384 aa8.04□□□□□ -1.12
HOXB3-209ENST00000478644 ABCC12Q96J65 1359 aa8.04□□□□□ -1.12
HOXB3-209ENST00000478644 ABCC4O15439 1325 aa8.03□□□□□ -1.12
HOXB3-209ENST00000478644 IL16Q14005 1332 aa8.03□□□□□ -1.12
HOXB3-209ENST00000478644 ANKRD36CQ5JPF3 1778 aa8.03□□□□□ -1.12
HOXB3-209ENST00000478644 CA12O43570 354 aa8.03□□□□□ -1.12
HOXB3-209ENST00000478644 EIF5BO60841 1220 aaKnown RBP8.03□□□□□ -1.12
HOXB3-209ENST00000478644 MZF1P28698 734 aaPredicted RBP8.03□□□□□ -1.12
HOXB3-209ENST00000478644 SCNN1AP37088 669 aa8.03□□□□□ -1.12
HOXB3-209ENST00000478644 CTCFP49711 727 aaPredicted RBP8.03□□□□□ -1.12
HOXB3-209ENST00000478644 CCDC152Q4G0S7 254 aa8.03□□□□□ -1.12
HOXB3-209ENST00000478644 GDF6Q6KF10 455 aaPredicted RBP8.03□□□□□ -1.12
HOXB3-209ENST00000478644 ATCAYQ86WG3 371 aa8.03□□□□□ -1.12
HOXB3-209ENST00000478644 SPACA7Q96KW9 195 aa8.03□□□□□ -1.12
HOXB3-209ENST00000478644 BCL2L13Q9BXK5 485 aa8.03□□□□□ -1.12
HOXB3-209ENST00000478644 STK31Q9BXU1 1019 aa8.03□□□□□ -1.12
HOXB3-209ENST00000478644 GPRC5DQ9NZD1 345 aa8.03□□□□□ -1.12
HOXB3-209ENST00000478644 TRIM33Q9UPN9 1127 aa8.03□□□□□ -1.12
HOXB3-209ENST00000478644 ZNF541Q9H0D2 1346 aa8.03□□□□□ -1.12
HOXB3-209ENST00000478644 CACNA1SQ13698 1873 aa8.02□□□□□ -1.12
HOXB3-209ENST00000478644 CCER2I3L3R5 266 aa8.02□□□□□ -1.13
HOXB3-209ENST00000478644 IRS4O14654 1257 aaPredicted RBP8.02□□□□□ -1.13
HOXB3-209ENST00000478644 PCCAP05165 728 aaPredicted RBP8.02□□□□□ -1.13
HOXB3-209ENST00000478644 HSPA1AP0DMV8 641 aaKnown RBP8.02□□□□□ -1.13
HOXB3-209ENST00000478644 HSPA1BP0DMV9 641 aaKnown RBP8.02□□□□□ -1.13
HOXB3-209ENST00000478644 MAP2K2P36507 400 aa8.02□□□□□ -1.13
HOXB3-209ENST00000478644 EIF1AXP47813 144 aaKnown RBP8.02□□□□□ -1.13
HOXB3-209ENST00000478644 RPS8P62241 208 aaKnown RBP8.02□□□□□ -1.13
HOXB3-209ENST00000478644 ALKBH2Q6NS38 261 aa8.02□□□□□ -1.13
HOXB3-209ENST00000478644 CDC37L1Q7L3B6 337 aa8.02□□□□□ -1.13
HOXB3-209ENST00000478644 ZC3H12CQ9C0D7 883 aaKnown RBP8.02□□□□□ -1.13
HOXB3-209ENST00000478644 TMEM63CQ9P1W3 806 aa8.02□□□□□ -1.13
HOXB3-209ENST00000478644 TM4SF5O14894 197 aa8.01□□□□□ -1.13
HOXB3-209ENST00000478644 PDE8AO60658 829 aa8.01□□□□□ -1.13
HOXB3-209ENST00000478644 PDGFAP04085 211 aa8.01□□□□□ -1.13
HOXB3-209ENST00000478644 HCLS1P14317 486 aaPredicted RBP8.01□□□□□ -1.13
HOXB3-209ENST00000478644 NOS3P29474 1203 aa8.01□□□□□ -1.13
HOXB3-209ENST00000478644 CXCL9Q07325 125 aa8.01□□□□□ -1.13
HOXB3-209ENST00000478644 AOC3Q16853 763 aa8.01□□□□□ -1.13
HOXB3-209ENST00000478644 PROSER3Q2NL68 480 aa8.01□□□□□ -1.13
HOXB3-209ENST00000478644 DZIP1LQ8IYY4 767 aaKnown RBP8.01□□□□□ -1.13
HOXB3-209ENST00000478644 EDEM1Q92611 657 aa8.01□□□□□ -1.13
HOXB3-209ENST00000478644 CDC5LQ99459 802 aaKnown RBP8.01□□□□□ -1.13
HOXB3-209ENST00000478644 MRPL18Q9H0U6 180 aaKnown RBP8.01□□□□□ -1.13
HOXB3-209ENST00000478644 CWC25Q9NXE8 425 aaPredicted RBP8.01□□□□□ -1.13
HOXB3-209ENST00000478644 SALL4Q9UJQ4 1053 aa8.01□□□□□ -1.13
HOXB3-209ENST00000478644 PPME1Q9Y570 386 aa8.01□□□□□ -1.13
HOXB3-209ENST00000478644 ADAMTSL1Q8N6G6 1762 aa8□□□□□ -1.13
HOXB3-209ENST00000478644 SMNDC1O75940 238 aaKnown RBP eCLIP8□□□□□ -1.13
HOXB3-209ENST00000478644 CYP2E1P05181 493 aaPredicted RBP8□□□□□ -1.13
HOXB3-209ENST00000478644 PCSK2P16519 638 aa8□□□□□ -1.13
HOXB3-209ENST00000478644 MPSTP25325 297 aa8□□□□□ -1.13
HOXB3-209ENST00000478644 HTRA3P83110 453 aa8□□□□□ -1.13
HOXB3-209ENST00000478644 ATP11AP98196 1134 aa8□□□□□ -1.13
HOXB3-209ENST00000478644 MAP1SQ66K74 1059 aaPredicted RBP8□□□□□ -1.13
HOXB3-209ENST00000478644 OLFM4Q6UX06 510 aa8□□□□□ -1.13
HOXB3-209ENST00000478644 ZNF438Q7Z4V0 828 aa8□□□□□ -1.13
HOXB3-209ENST00000478644 WDR63Q8IWG1 891 aa8□□□□□ -1.13
HOXB3-209ENST00000478644 FAM9BQ8IZU0 186 aa8□□□□□ -1.13
HOXB3-209ENST00000478644 Q8N3U1 123 aa8□□□□□ -1.13
HOXB3-209ENST00000478644 FAM89AQ96GI7 184 aa8□□□□□ -1.13
HOXB3-209ENST00000478644 METTL22Q9BUU2 404 aaPredicted RBP8□□□□□ -1.13
HOXB3-209ENST00000478644 PBX4Q9BYU1 374 aa8□□□□□ -1.13
HOXB3-209ENST00000478644 ADAM19Q9H013 955 aa8□□□□□ -1.13
HOXB3-209ENST00000478644 CNTN3Q9P232 1028 aa8□□□□□ -1.13
HOXB3-209ENST00000478644 CNOT7Q9UIV1 285 aaKnown RBP8□□□□□ -1.13
HOXB3-209ENST00000478644 ABT1Q9ULW3 272 aaKnown RBP8□□□□□ -1.13
HOXB3-209ENST00000478644 WDR33Q9C0J8 1336 aaKnown RBP8□□□□□ -1.13
HOXB3-209ENST00000478644 TCERG1O14776 1098 aaKnown RBP7.99□□□□□ -1.13
HOXB3-209ENST00000478644 ANXA1P04083 346 aa7.99□□□□□ -1.13
HOXB3-209ENST00000478644 EPS15P42566 896 aa7.99□□□□□ -1.13
HOXB3-209ENST00000478644 IREB2P48200 963 aaKnown RBP7.99□□□□□ -1.13
HOXB3-209ENST00000478644 XP32Q5T750 250 aa7.99□□□□□ -1.13
HOXB3-209ENST00000478644 CEP135Q66GS9 1140 aa7.99□□□□□ -1.13
HOXB3-209ENST00000478644 DIEXFQ68CQ4 756 aaKnown RBP7.99□□□□□ -1.13
HOXB3-209ENST00000478644 KSR2Q6VAB6 950 aa7.99□□□□□ -1.13
HOXB3-209ENST00000478644 Q6ZS46 218 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms