RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.35■□□□□ 0.05
TDP2-204ENST00000478507 AMOTL1Q8IY63 956 aa15.35■□□□□ 0.05
TDP2-204ENST00000478507 KLHDC9Q8NEP7 349 aa15.35■□□□□ 0.05
TDP2-204ENST00000478507 MAFAQ8NHW3 353 aaPredicted RBP15.35■□□□□ 0.05
TDP2-204ENST00000478507 MYLIPQ8WY64 445 aa15.35■□□□□ 0.05
TDP2-204ENST00000478507 TOX2Q96NM4 488 aa15.35■□□□□ 0.05
TDP2-204ENST00000478507 STRBPQ96SI9 672 aaKnown RBP15.35■□□□□ 0.05
TDP2-204ENST00000478507 NUP88Q99567 741 aaPredicted RBP15.35■□□□□ 0.05
TDP2-204ENST00000478507 TSEN34Q9BSV6 310 aaKnown RBP15.35■□□□□ 0.05
TDP2-204ENST00000478507 TEX13BQ9BXU2 312 aa15.35■□□□□ 0.05
TDP2-204ENST00000478507 RIPK3Q9Y572 518 aa15.35■□□□□ 0.05
TDP2-204ENST00000478507 SYNGAP1Q96PV0 1343 aa15.35■□□□□ 0.05
TDP2-204ENST00000478507 SYNRGQ9UMZ2 1314 aa15.35■□□□□ 0.05
TDP2-204ENST00000478507 MYH4Q9Y623 1939 aa15.35■□□□□ 0.05
TDP2-204ENST00000478507 IGKV6D-41A0A0C4DH26 115 aa15.34■□□□□ 0.05
TDP2-204ENST00000478507 PQBP1O60828 265 aaKnown RBP15.34■□□□□ 0.05
TDP2-204ENST00000478507 ACLYP53396 1101 aa15.34■□□□□ 0.05
TDP2-204ENST00000478507 MIER1Q8N108 512 aa15.34■□□□□ 0.05
TDP2-204ENST00000478507 DDRGK1Q96HY6 314 aa15.34■□□□□ 0.05
TDP2-204ENST00000478507 FGD4Q96M96 766 aa15.34■□□□□ 0.05
TDP2-204ENST00000478507 SLF1Q9BQI6 1058 aa15.34■□□□□ 0.05
TDP2-204ENST00000478507 NYAP2Q9P242 653 aa15.34■□□□□ 0.05
TDP2-204ENST00000478507 CNPY2Q9Y2B0 182 aa15.34■□□□□ 0.05
TDP2-204ENST00000478507 CHD9Q3L8U1 2897 aa15.34■□□□□ 0.05
TDP2-204ENST00000478507 MYADML2A6NDP7 307 aa15.33■□□□□ 0.04
TDP2-204ENST00000478507 GSG1L2A8MUP6 293 aa15.33■□□□□ 0.04
TDP2-204ENST00000478507 F5H6K3 240 aa15.33■□□□□ 0.04
TDP2-204ENST00000478507 NDUFB10O96000 172 aa15.33■□□□□ 0.04
TDP2-204ENST00000478507 CST5P28325 142 aaPredicted RBP15.33■□□□□ 0.04
TDP2-204ENST00000478507 KLRC3Q07444 240 aa15.33■□□□□ 0.04
TDP2-204ENST00000478507 GIMAP6Q6P9H5 292 aa15.33■□□□□ 0.04
TDP2-204ENST00000478507 ZNF467Q7Z7K2 595 aaPredicted RBP15.33■□□□□ 0.04
TDP2-204ENST00000478507 RNPC3Q96LT9 517 aaKnown RBP15.33■□□□□ 0.04
TDP2-204ENST00000478507 BCL11AQ9H165 835 aa15.33■□□□□ 0.04
TDP2-204ENST00000478507 TBX21Q9UL17 535 aa15.33■□□□□ 0.04
TDP2-204ENST00000478507 MOXD2PA6NHM9 499 aa15.32■□□□□ 0.04
TDP2-204ENST00000478507 ADCY6O43306 1168 aa15.32■□□□□ 0.04
TDP2-204ENST00000478507 RAG1P15918 1043 aa15.32■□□□□ 0.04
TDP2-204ENST00000478507 FPGSQ05932 587 aa15.32■□□□□ 0.04
TDP2-204ENST00000478507 SNRNP48Q6IEG0 339 aaKnown RBP15.32■□□□□ 0.04
TDP2-204ENST00000478507 ZSCAN25Q6NSZ9 544 aa15.32■□□□□ 0.04
TDP2-204ENST00000478507 PRPF38AQ8NAV1 312 aaKnown RBP15.32■□□□□ 0.04
TDP2-204ENST00000478507 EPB41L4AQ9HCS5 686 aaPredicted RBP15.32■□□□□ 0.04
TDP2-204ENST00000478507 FAM184BQ9ULE4 1060 aa15.32■□□□□ 0.04
TDP2-204ENST00000478507 DUSP11O75319 330 aaKnown RBP15.31■□□□□ 0.04
TDP2-204ENST00000478507 CDK7P50613 346 aa15.31■□□□□ 0.04
TDP2-204ENST00000478507 IRX5P78411 483 aaPredicted RBP15.31■□□□□ 0.04
TDP2-204ENST00000478507 KCNA10Q16322 511 aa15.31■□□□□ 0.04
TDP2-204ENST00000478507 NUP133Q8WUM0 1156 aa15.31■□□□□ 0.04
TDP2-204ENST00000478507 OSBP2Q969R2 916 aa15.31■□□□□ 0.04
TDP2-204ENST00000478507 MKL1Q969V6 931 aa15.31■□□□□ 0.04
TDP2-204ENST00000478507 LRRCC1Q9C099 1032 aa15.31■□□□□ 0.04
TDP2-204ENST00000478507 UPF3AQ9H1J1 476 aaKnown RBP15.31■□□□□ 0.04
TDP2-204ENST00000478507 SLC38A10Q9HBR0 1119 aa15.31■□□□□ 0.04
TDP2-204ENST00000478507 STARD7Q9NQZ5 370 aa15.31■□□□□ 0.04
TDP2-204ENST00000478507 TMEM39AQ9NV64 488 aa15.31■□□□□ 0.04
TDP2-204ENST00000478507 CHD7Q9P2D1 2997 aa15.31■□□□□ 0.04
TDP2-204ENST00000478507 RAD21O60216 631 aa15.3■□□□□ 0.04
TDP2-204ENST00000478507 SMARCA5O60264 1052 aaPredicted RBP15.3■□□□□ 0.04
TDP2-204ENST00000478507 ELP1O95163 1332 aa15.3■□□□□ 0.04
TDP2-204ENST00000478507 TIMP1P01033 207 aa15.3■□□□□ 0.04
TDP2-204ENST00000478507 FOSL2P15408 326 aa15.3■□□□□ 0.04
TDP2-204ENST00000478507 RASIP1Q5U651 963 aa15.3■□□□□ 0.04
TDP2-204ENST00000478507 KBTBD3Q8NAB2 608 aa15.3■□□□□ 0.04
TDP2-204ENST00000478507 PLIN4Q96Q06 1357 aa15.3■□□□□ 0.04
TDP2-204ENST00000478507 KATNBL1Q9H079 304 aa15.3■□□□□ 0.04
TDP2-204ENST00000478507 ECHDC1Q9NTX5 307 aa15.3■□□□□ 0.04
TDP2-204ENST00000478507 SYNPO2Q9UMS6 1093 aa15.3■□□□□ 0.04
TDP2-204ENST00000478507 DCDC2CA8MYV0 355 aa15.29■□□□□ 0.04
TDP2-204ENST00000478507 CTAGE5O15320 804 aa15.29■□□□□ 0.04
TDP2-204ENST00000478507 DNAJB2P25686 324 aa15.29■□□□□ 0.04
TDP2-204ENST00000478507 NKX3-2P78367 333 aa15.29■□□□□ 0.04
TDP2-204ENST00000478507 ACVR2BQ13705 512 aa15.29■□□□□ 0.04
TDP2-204ENST00000478507 GRIN2CQ14957 1233 aa15.29■□□□□ 0.04
TDP2-204ENST00000478507 C16orf59Q7L2K0 433 aa15.29■□□□□ 0.04
TDP2-204ENST00000478507 APPBP2Q92624 585 aa15.29■□□□□ 0.04
TDP2-204ENST00000478507 DDX11Q96FC9 970 aa15.29■□□□□ 0.04
TDP2-204ENST00000478507 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.29■□□□□ 0.043e-7■■□□□ 14.4
TDP2-204ENST00000478507 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.29■□□□□ 0.04
TDP2-204ENST00000478507 ZHX1Q9UKY1 873 aaPredicted RBP15.29■□□□□ 0.04
TDP2-204ENST00000478507 MYO9BQ13459 2157 aa15.29■□□□□ 0.04
TDP2-204ENST00000478507 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.28■□□□□ 0.04
TDP2-204ENST00000478507 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.28■□□□□ 0.04
TDP2-204ENST00000478507 OAZ1P54368 228 aa15.28■□□□□ 0.04
TDP2-204ENST00000478507 GJA9P57773 515 aa15.28■□□□□ 0.04
TDP2-204ENST00000478507 CCDC144BQ3MJ40 725 aa15.28■□□□□ 0.04
TDP2-204ENST00000478507 MFSD5Q6N075 450 aa15.28■□□□□ 0.04
TDP2-204ENST00000478507 CPXCR1Q8N123 301 aa15.28■□□□□ 0.04
TDP2-204ENST00000478507 GMCL1P1Q8NEA9 526 aa15.28■□□□□ 0.04
TDP2-204ENST00000478507 CEP95Q96GE4 821 aa15.28■□□□□ 0.04
TDP2-204ENST00000478507 ABHD16BQ9H3Z7 469 aa15.28■□□□□ 0.04
TDP2-204ENST00000478507 CHMP4BQ9H444 224 aaKnown RBP15.28■□□□□ 0.04
TDP2-204ENST00000478507 MKNK2Q9HBH9 465 aa15.28■□□□□ 0.04
TDP2-204ENST00000478507 RAVER2Q9HCJ3 691 aaKnown RBP15.28■□□□□ 0.04
TDP2-204ENST00000478507 MTMR4Q9NYA4 1195 aa15.28■□□□□ 0.04
TDP2-204ENST00000478507 CLIP2Q9UDT6 1046 aa15.28■□□□□ 0.04
TDP2-204ENST00000478507 LRRC37A2A6NM11 1700 aa15.28■□□□□ 0.04
TDP2-204ENST00000478507 MROH7Q68CQ1 1323 aa15.27■□□□□ 0.04
TDP2-204ENST00000478507 MINDY4BA8MYZ0 360 aa15.27■□□□□ 0.04
TDP2-204ENST00000478507 GPAA1O43292 621 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms