RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 PARP14Q460N5 1801 aa18.35■□□□□ 0.53
HMGA1-206ENST00000478214 ZBED4O75132 1171 aa18.34■□□□□ 0.53
HMGA1-206ENST00000478214 SLC25A27O95847 323 aa18.34■□□□□ 0.53
HMGA1-206ENST00000478214 HMGCRP04035 888 aa18.34■□□□□ 0.53
HMGA1-206ENST00000478214 STAT2P52630 851 aa18.34■□□□□ 0.53
HMGA1-206ENST00000478214 CCL14Q16627 93 aa18.34■□□□□ 0.53
HMGA1-206ENST00000478214 CCDC96Q2M329 555 aa18.34■□□□□ 0.53
HMGA1-206ENST00000478214 FAM160B2Q86V87 743 aa18.34■□□□□ 0.53
HMGA1-206ENST00000478214 IQCA1Q86XH1 822 aa18.34■□□□□ 0.53
HMGA1-206ENST00000478214 DGKHQ86XP1 1220 aa18.34■□□□□ 0.53
HMGA1-206ENST00000478214 CPXCR1Q8N123 301 aa18.34■□□□□ 0.53
HMGA1-206ENST00000478214 CHURC1Q8WUH1 139 aa18.34■□□□□ 0.53
HMGA1-206ENST00000478214 DCAF4Q8WV16 495 aa18.34■□□□□ 0.53
HMGA1-206ENST00000478214 ZSCAN10Q96SZ4 725 aaPredicted RBP18.34■□□□□ 0.53
HMGA1-206ENST00000478214 APBA2Q99767 749 aa18.34■□□□□ 0.53
HMGA1-206ENST00000478214 RNF208Q9H0X6 261 aa18.34■□□□□ 0.53
HMGA1-206ENST00000478214 SLC38A10Q9HBR0 1119 aa18.34■□□□□ 0.53
HMGA1-206ENST00000478214 CTDP1Q9Y5B0 961 aaPredicted RBP18.34■□□□□ 0.53
HMGA1-206ENST00000478214 STRNO43815 780 aa18.33■□□□□ 0.52
HMGA1-206ENST00000478214 CDC45O75419 566 aa18.33■□□□□ 0.52
HMGA1-206ENST00000478214 ZKSCAN1P17029 563 aaPredicted RBP18.33■□□□□ 0.52
HMGA1-206ENST00000478214 ADORA2AP29274 412 aa18.33■□□□□ 0.52
HMGA1-206ENST00000478214 MLLT1Q03111 559 aaPredicted RBP18.33■□□□□ 0.52
HMGA1-206ENST00000478214 CCDC178Q5BJE1 867 aa18.33■□□□□ 0.52
HMGA1-206ENST00000478214 SNRNP48Q6IEG0 339 aaKnown RBP18.33■□□□□ 0.52
HMGA1-206ENST00000478214 TEX13BQ9BXU2 312 aa18.33■□□□□ 0.52
HMGA1-206ENST00000478214 RAVER2Q9HCJ3 691 aaKnown RBP18.33■□□□□ 0.52
HMGA1-206ENST00000478214 TNKSO95271 1327 aa18.32■□□□□ 0.52
HMGA1-206ENST00000478214 FRMPD2Q68DX3 1309 aaPredicted RBP18.32■□□□□ 0.52
HMGA1-206ENST00000478214 E7EWF7 191 aa18.32■□□□□ 0.52
HMGA1-206ENST00000478214 PLA2G6O60733 806 aa18.32■□□□□ 0.52
HMGA1-206ENST00000478214 HOXC6P09630 235 aa18.32■□□□□ 0.52
HMGA1-206ENST00000478214 SLC4A3P48751 1232 aa18.32■□□□□ 0.52
HMGA1-206ENST00000478214 TRDNQ13061 729 aa18.32■□□□□ 0.52
HMGA1-206ENST00000478214 TTBK2Q6IQ55 1244 aa18.32■□□□□ 0.52
HMGA1-206ENST00000478214 STOX1Q6ZVD7 989 aa18.32■□□□□ 0.52
HMGA1-206ENST00000478214 CYB5R4Q7L1T6 521 aa18.32■□□□□ 0.52
HMGA1-206ENST00000478214 TRMT44Q8IYL2 757 aaKnown RBP18.32■□□□□ 0.52
HMGA1-206ENST00000478214 ENAHQ8N8S7 591 aaPredicted RBP18.32■□□□□ 0.52
HMGA1-206ENST00000478214 NPLOC4Q8TAT6 608 aa18.32■□□□□ 0.52
HMGA1-206ENST00000478214 ANKS1AQ92625 1134 aa18.32■□□□□ 0.52
HMGA1-206ENST00000478214 GPCPD1Q9NPB8 672 aa18.32■□□□□ 0.52
HMGA1-206ENST00000478214 ANO2Q9NQ90 1003 aa18.32■□□□□ 0.52
HMGA1-206ENST00000478214 RIPK3Q9Y572 518 aa18.32■□□□□ 0.52
HMGA1-206ENST00000478214 ATP2A1O14983 1001 aa18.31■□□□□ 0.52
HMGA1-206ENST00000478214 COBLO75128 1261 aa18.31■□□□□ 0.52
HMGA1-206ENST00000478214 GJB1P08034 283 aa18.31■□□□□ 0.52
HMGA1-206ENST00000478214 PDHBP11177 359 aa18.31■□□□□ 0.52
HMGA1-206ENST00000478214 FCER1AP12319 257 aa18.31■□□□□ 0.52
HMGA1-206ENST00000478214 SNAP25P60880 206 aa18.31■□□□□ 0.52
HMGA1-206ENST00000478214 DPP9Q86TI2 863 aa18.31■□□□□ 0.52
HMGA1-206ENST00000478214 ABRAQ8N0Z2 381 aa18.31■□□□□ 0.52
HMGA1-206ENST00000478214 UBAC1Q9BSL1 405 aa18.31■□□□□ 0.52
HMGA1-206ENST00000478214 FLRT1Q9NZU1 646 aa18.31■□□□□ 0.52
HMGA1-206ENST00000478214 PRR12Q9ULL5 1215 aa18.31■□□□□ 0.52
HMGA1-206ENST00000478214 SNHG28P0DPA3 235 aa18.3■□□□□ 0.52
HMGA1-206ENST00000478214 FDX1P10109 184 aa18.3■□□□□ 0.52
HMGA1-206ENST00000478214 COPB2P35606 906 aa18.3■□□□□ 0.52
HMGA1-206ENST00000478214 SLC16A2P36021 539 aa18.3■□□□□ 0.52
HMGA1-206ENST00000478214 CASC1Q6TDU7 716 aa18.3■□□□□ 0.52
HMGA1-206ENST00000478214 RALYLQ86SE5 291 aaKnown RBP18.3■□□□□ 0.52
HMGA1-206ENST00000478214 PNMA1Q8ND90 353 aa18.3■□□□□ 0.52
HMGA1-206ENST00000478214 MMP19Q99542 508 aa18.3■□□□□ 0.52
HMGA1-206ENST00000478214 KAT14Q9H8E8 782 aa18.3■□□□□ 0.52
HMGA1-206ENST00000478214 COL11A1P12107 1806 aaPredicted RBP18.3■□□□□ 0.52
HMGA1-206ENST00000478214 PRKAR2AP13861 404 aaKnown RBP18.29■□□□□ 0.52
HMGA1-206ENST00000478214 OAZ1P54368 228 aa18.29■□□□□ 0.52
HMGA1-206ENST00000478214 CACNB2Q08289 660 aaPredicted RBP18.29■□□□□ 0.52
HMGA1-206ENST00000478214 ZNF543Q08ER8 600 aa18.29■□□□□ 0.52
HMGA1-206ENST00000478214 MAP3K21Q5TCX8 1036 aa18.29■□□□□ 0.52
HMGA1-206ENST00000478214 BTNL9Q6UXG8 535 aa18.29■□□□□ 0.52
HMGA1-206ENST00000478214 NCOA7Q8NI08 942 aa18.29■□□□□ 0.52
HMGA1-206ENST00000478214 SHISA4Q96DD7 197 aa18.29■□□□□ 0.52
HMGA1-206ENST00000478214 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.29■□□□□ 0.521e-11■■■■■ 50.4
HMGA1-206ENST00000478214 PAK6Q9NQU5 681 aaPredicted RBP18.29■□□□□ 0.52
HMGA1-206ENST00000478214 ZNF536O15090 1300 aa18.28■□□□□ 0.52
HMGA1-206ENST00000478214 RPTORQ8N122 1335 aa18.28■□□□□ 0.52
HMGA1-206ENST00000478214 SLC27A2O14975 620 aa18.28■□□□□ 0.52
HMGA1-206ENST00000478214 PGK2P07205 417 aa18.28■□□□□ 0.52
HMGA1-206ENST00000478214 GJA8P48165 433 aa18.28■□□□□ 0.52
HMGA1-206ENST00000478214 KCTD2Q14681 263 aa18.28■□□□□ 0.52
HMGA1-206ENST00000478214 SEC23AQ15436 765 aa18.28■□□□□ 0.52
HMGA1-206ENST00000478214 IFIT1BQ5T764 474 aaKnown RBP18.28■□□□□ 0.52
HMGA1-206ENST00000478214 SYDE2Q5VT97 1194 aa18.28■□□□□ 0.52
HMGA1-206ENST00000478214 CREB3L3Q68CJ9 461 aa18.28■□□□□ 0.52
HMGA1-206ENST00000478214 CCDC174Q6PII3 467 aa18.28■□□□□ 0.52
HMGA1-206ENST00000478214 U2AF1L4Q8WU68 220 aaKnown RBP18.28■□□□□ 0.52
HMGA1-206ENST00000478214 AGBL1Q96MI9 1066 aa18.28■□□□□ 0.52
HMGA1-206ENST00000478214 DEFB118Q96PH6 123 aa18.28■□□□□ 0.52
HMGA1-206ENST00000478214 HMX1Q9NP08 348 aaPredicted RBP18.28■□□□□ 0.52
HMGA1-206ENST00000478214 MKI67P46013 3256 aaKnown RBP18.27■□□□□ 0.52
HMGA1-206ENST00000478214 GOLGA8HP0CJ92 632 aa18.27■□□□□ 0.52
HMGA1-206ENST00000478214 CYP2C19P33261 490 aa18.27■□□□□ 0.52
HMGA1-206ENST00000478214 NECTIN1Q15223 517 aa18.27■□□□□ 0.52
HMGA1-206ENST00000478214 MFSD14CQ5VZR4 134 aa18.27■□□□□ 0.52
HMGA1-206ENST00000478214 CHST3Q7LGC8 479 aa18.27■□□□□ 0.52
HMGA1-206ENST00000478214 HOMER2Q9NSB8 354 aa18.27■□□□□ 0.52
HMGA1-206ENST00000478214 SLC5A4Q9NY91 659 aa18.27■□□□□ 0.52
HMGA1-206ENST00000478214 RBBP6Q7Z6E9 1792 aaKnown RBP18.27■□□□□ 0.51
HMGA1-206ENST00000478214 IFIT3O14879 490 aaKnown RBP18.26■□□□□ 0.51
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