RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 PRPF38AQ8NAV1 312 aaKnown RBP19.96■□□□□ 0.79
TRIM13-208ENST00000478111 OTUD7AQ8TE49 926 aaPredicted RBP19.96■□□□□ 0.79
TRIM13-208ENST00000478111 TEX13BQ9BXU2 312 aa19.96■□□□□ 0.79
TRIM13-208ENST00000478111 XPNPEP3Q9NQH7 507 aa19.96■□□□□ 0.79
TRIM13-208ENST00000478111 PDLIM7Q9NR12 457 aa19.96■□□□□ 0.79
TRIM13-208ENST00000478111 PRKAG2Q9UGJ0 569 aa19.96■□□□□ 0.79
TRIM13-208ENST00000478111 STXBP5LQ9Y2K9 1186 aa19.96■□□□□ 0.79
TRIM13-208ENST00000478111 DNAJC25-GNG10A0A024R161 153 aa19.95■□□□□ 0.78
TRIM13-208ENST00000478111 PGK1P00558 417 aa19.95■□□□□ 0.78
TRIM13-208ENST00000478111 RARBP10826 455 aa19.95■□□□□ 0.78
TRIM13-208ENST00000478111 TDO2P48775 406 aa19.95■□□□□ 0.78
TRIM13-208ENST00000478111 CEP95Q96GE4 821 aa19.95■□□□□ 0.78
TRIM13-208ENST00000478111 MTMR4Q9NYA4 1195 aa19.95■□□□□ 0.78
TRIM13-208ENST00000478111 TTC41PQ6P2S7 1318 aa19.95■□□□□ 0.78
TRIM13-208ENST00000478111 TRIM43BA6NCK2 446 aa19.94■□□□□ 0.78
TRIM13-208ENST00000478111 SNAI1O95863 264 aaPredicted RBP19.94■□□□□ 0.78
TRIM13-208ENST00000478111 ZNF444Q8N0Y2 327 aaPredicted RBP19.94■□□□□ 0.78
TRIM13-208ENST00000478111 TRIM43Q96BQ3 446 aaPredicted RBP19.94■□□□□ 0.78
TRIM13-208ENST00000478111 LENG1Q96BZ8 264 aaPredicted RBP19.94■□□□□ 0.78
TRIM13-208ENST00000478111 PRUNE2Q8WUY3 3088 aa19.94■□□□□ 0.78
TRIM13-208ENST00000478111 ADAMTS4O75173 837 aa19.93■□□□□ 0.78
TRIM13-208ENST00000478111 APPP05067 770 aa19.93■□□□□ 0.78
TRIM13-208ENST00000478111 TLE2Q04725 743 aa19.93■□□□□ 0.78
TRIM13-208ENST00000478111 SHHQ15465 462 aa19.93■□□□□ 0.78
TRIM13-208ENST00000478111 C9orf50Q5SZB4 431 aa19.93■□□□□ 0.78
TRIM13-208ENST00000478111 FAM109BQ6ICB4 259 aaPredicted RBP19.93■□□□□ 0.78
TRIM13-208ENST00000478111 MAMDC4Q6UXC1 1216 aa19.93■□□□□ 0.78
TRIM13-208ENST00000478111 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.93■□□□□ 0.78
TRIM13-208ENST00000478111 MSL3Q8N5Y2 521 aaKnown RBP19.93■□□□□ 0.78
TRIM13-208ENST00000478111 BADQ92934 168 aa19.93■□□□□ 0.78
TRIM13-208ENST00000478111 SLC38A10Q9HBR0 1119 aa19.93■□□□□ 0.78
TRIM13-208ENST00000478111 SYNPO2Q9UMS6 1093 aa19.93■□□□□ 0.78
TRIM13-208ENST00000478111 PLIN4Q96Q06 1357 aa19.93■□□□□ 0.78
TRIM13-208ENST00000478111 AKR1A1P14550 325 aa19.92■□□□□ 0.78
TRIM13-208ENST00000478111 ITGB8P26012 769 aa19.92■□□□□ 0.78
TRIM13-208ENST00000478111 ZMYM1Q5SVZ6 1142 aa19.92■□□□□ 0.78
TRIM13-208ENST00000478111 RNF180Q86T96 592 aa19.92■□□□□ 0.78
TRIM13-208ENST00000478111 CPXCR1Q8N123 301 aa19.92■□□□□ 0.78
TRIM13-208ENST00000478111 GMCL1P1Q8NEA9 526 aa19.92■□□□□ 0.78
TRIM13-208ENST00000478111 NEDD1Q8NHV4 660 aa19.92■□□□□ 0.78
TRIM13-208ENST00000478111 FGD4Q96M96 766 aa19.92■□□□□ 0.78
TRIM13-208ENST00000478111 ZNF287Q9HBT7 754 aa19.92■□□□□ 0.78
TRIM13-208ENST00000478111 RAVER2Q9HCJ3 691 aaKnown RBP19.92■□□□□ 0.78
TRIM13-208ENST00000478111 PRDM5Q9NQX1 630 aaPredicted RBP19.92■□□□□ 0.78
TRIM13-208ENST00000478111 SYNGAP1Q96PV0 1343 aa19.92■□□□□ 0.78
TRIM13-208ENST00000478111 A0A1W2PQ45 241 aaPredicted RBP19.91■□□□□ 0.78
TRIM13-208ENST00000478111 A0A1W2PQY0 241 aa19.91■□□□□ 0.78
TRIM13-208ENST00000478111 FOXP2O15409 715 aa19.91■□□□□ 0.78
TRIM13-208ENST00000478111 ZBED4O75132 1171 aa19.91■□□□□ 0.78
TRIM13-208ENST00000478111 TTLL1O95922 423 aa19.91■□□□□ 0.78
TRIM13-208ENST00000478111 LRRC47Q8N1G4 583 aaKnown RBP19.91■□□□□ 0.78
TRIM13-208ENST00000478111 KIFC2Q96AC6 838 aa19.91■□□□□ 0.78
TRIM13-208ENST00000478111 DDX11Q96FC9 970 aa19.91■□□□□ 0.78
TRIM13-208ENST00000478111 GUCD1Q96NT3 240 aa19.91■□□□□ 0.78
TRIM13-208ENST00000478111 FEM1BQ9UK73 627 aa19.91■□□□□ 0.78
TRIM13-208ENST00000478111 CNPY2Q9Y2B0 182 aa19.91■□□□□ 0.78
TRIM13-208ENST00000478111 SALL3Q9BXA9 1300 aa19.91■□□□□ 0.78
TRIM13-208ENST00000478111 VCANP13611 3396 aa19.9■□□□□ 0.78
TRIM13-208ENST00000478111 DLL1O00548 723 aa19.9■□□□□ 0.78
TRIM13-208ENST00000478111 ERC2O15083 957 aa19.9■□□□□ 0.78
TRIM13-208ENST00000478111 LRRFIP1Q32MZ4 808 aaKnown RBP19.9■□□□□ 0.78
TRIM13-208ENST00000478111 CCSAPQ6IQ19 270 aaPredicted RBP19.9■□□□□ 0.78
TRIM13-208ENST00000478111 ZNF467Q7Z7K2 595 aaPredicted RBP19.9■□□□□ 0.78
TRIM13-208ENST00000478111 KLHDC9Q8NEP7 349 aa19.9■□□□□ 0.78
TRIM13-208ENST00000478111 SLC4A3P48751 1232 aa19.89■□□□□ 0.77
TRIM13-208ENST00000478111 TFAP4Q01664 338 aa19.89■□□□□ 0.77
TRIM13-208ENST00000478111 PPARAQ07869 468 aa19.89■□□□□ 0.77
TRIM13-208ENST00000478111 SLFN13Q68D06 897 aa19.89■□□□□ 0.77
TRIM13-208ENST00000478111 TSEN34Q9BSV6 310 aaKnown RBP19.89■□□□□ 0.77
TRIM13-208ENST00000478111 FSD1Q9BTV5 496 aa19.89■□□□□ 0.77
TRIM13-208ENST00000478111 NACAP1Q9BZK3 213 aa19.89■□□□□ 0.77
TRIM13-208ENST00000478111 FAM184BQ9ULE4 1060 aa19.89■□□□□ 0.77
TRIM13-208ENST00000478111 SYNRGQ9UMZ2 1314 aa19.89■□□□□ 0.77
TRIM13-208ENST00000478111 TACC3Q9Y6A5 838 aa19.89■□□□□ 0.77
TRIM13-208ENST00000478111 ADCY6O43306 1168 aa19.88■□□□□ 0.77
TRIM13-208ENST00000478111 TSPY3P0CV98 308 aa19.88■□□□□ 0.77
TRIM13-208ENST00000478111 TSPY8P0CW00 308 aa19.88■□□□□ 0.77
TRIM13-208ENST00000478111 BMP3P12645 472 aa19.88■□□□□ 0.77
TRIM13-208ENST00000478111 MX1P20591 662 aa19.88■□□□□ 0.77
TRIM13-208ENST00000478111 ACLYP53396 1101 aa19.88■□□□□ 0.77
TRIM13-208ENST00000478111 OAZ1P54368 228 aa19.88■□□□□ 0.77
TRIM13-208ENST00000478111 PDE4BQ07343 736 aa19.88■□□□□ 0.77
TRIM13-208ENST00000478111 CHST13Q8NET6 341 aa19.88■□□□□ 0.77
TRIM13-208ENST00000478111 NAPBQ9H115 298 aa19.88■□□□□ 0.77
TRIM13-208ENST00000478111 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.88■□□□□ 0.77
TRIM13-208ENST00000478111 ZNF536O15090 1300 aa19.87■□□□□ 0.77
TRIM13-208ENST00000478111 MYADML2A6NDP7 307 aa19.87■□□□□ 0.77
TRIM13-208ENST00000478111 KIAA0355O15063 1070 aa19.87■□□□□ 0.77
TRIM13-208ENST00000478111 DUSP11O75319 330 aaKnown RBP19.87■□□□□ 0.77
TRIM13-208ENST00000478111 CLTBP09497 229 aa19.87■□□□□ 0.77
TRIM13-208ENST00000478111 EPHB4P54760 987 aa19.87■□□□□ 0.77
TRIM13-208ENST00000478111 IRX5P78411 483 aaPredicted RBP19.87■□□□□ 0.77
TRIM13-208ENST00000478111 ACVR2BQ13705 512 aa19.87■□□□□ 0.77
TRIM13-208ENST00000478111 CCDC129Q6ZRS4 1044 aa19.87■□□□□ 0.77
TRIM13-208ENST00000478111 ANKRD35Q8N283 1001 aa19.87■□□□□ 0.77
TRIM13-208ENST00000478111 KATNBL1Q9H079 304 aa19.87■□□□□ 0.77
TRIM13-208ENST00000478111 INCENPQ9NQS7 918 aa19.87■□□□□ 0.77
TRIM13-208ENST00000478111 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.87■□□□□ 0.77
TRIM13-208ENST00000478111 FBXO40Q9UH90 709 aa19.87■□□□□ 0.77
TRIM13-208ENST00000478111 ZHX1Q9UKY1 873 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms