RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PTPN12Q05209 780 aaKnown RBP5.84□□□□□ -1.47
SF3B6-202ENST00000478050 PCSK7Q16549 785 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 ADCK5Q3MIX3 580 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 TNNI3KQ59H18 835 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 EPHA10Q5JZY3 1008 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 BLOC1S2Q6QNY1 142 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 FAM35AQ86V20 835 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 WFDC8Q8IUA0 241 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 CCDC83Q8IWF9 413 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 CHAMP1Q96JM3 812 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 FAM227BQ96M60 508 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 SIL1Q9H173 461 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 BOLA2Q9H3K6 86 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 GPR108Q9NPR9 543 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 TLR7Q9NYK1 1049 aaKnown RBP5.84□□□□□ -1.47
SF3B6-202ENST00000478050 CCDC39Q9UFE4 941 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 MTMR6Q9Y217 621 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 USP16Q9Y5T5 823 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 FPGT-TNNI3KV9GXZ4 949 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 COL5A2P05997 1499 aaPredicted RBP5.83□□□□□ -1.48
SF3B6-202ENST00000478050 PALLDQ8WX93 1383 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 NRAPQ86VF7 1730 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 DDX60Q8IY21 1712 aaKnown RBP5.83□□□□□ -1.48
SF3B6-202ENST00000478050 SPATA31A1Q5TZJ5 1347 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 WDR17Q8IZU2 1322 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 SH3TC1Q8TE82 1336 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 A0A087WZG4 1122 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 A0A0D9SFI3 127 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 TMEM88BA6NKF7 163 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 PIK3CDO00329 1044 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 FOXN1O15353 648 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 GADD45BO75293 160 aaPredicted RBP5.83□□□□□ -1.48
SF3B6-202ENST00000478050 TAF5LO75529 589 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 LARGE1O95461 756 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 CPB1P15086 417 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 CASP7P55210 303 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 TFCP2Q12800 502 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 FZD5Q13467 585 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 CHRNA2Q15822 529 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 ME3Q16798 604 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 USPL1Q5W0Q7 1092 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 UBE3BQ7Z3V4 1068 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 ZCRB1Q8TBF4 217 aaKnown RBP5.83□□□□□ -1.48
SF3B6-202ENST00000478050 NAP1L5Q96NT1 182 aaPredicted RBP5.83□□□□□ -1.48
SF3B6-202ENST00000478050 HAUS7Q99871 368 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 CWC25Q9NXE8 425 aaPredicted RBP5.83□□□□□ -1.48
SF3B6-202ENST00000478050 DBNLQ9UJU6 430 aaKnown RBP5.83□□□□□ -1.48
SF3B6-202ENST00000478050 NAGPAQ9UK23 515 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 CNPY2Q9Y2B0 182 aa5.83□□□□□ -1.48
SF3B6-202ENST00000478050 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.83□□□□□ -1.48
SF3B6-202ENST00000478050 ZNF609O15014 1411 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 TPM2P07951 284 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 CPA1P15085 419 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 NFKB1P19838 968 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 IL15P40933 162 aaPredicted RBP5.82□□□□□ -1.48
SF3B6-202ENST00000478050 HIRAP54198 1017 aaPredicted RBP5.82□□□□□ -1.48
SF3B6-202ENST00000478050 ST3GAL1Q11201 340 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 CCINQ13939 588 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 HIF1AQ16665 826 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 TXNRD1Q16881 649 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.82□□□□□ -1.48
SF3B6-202ENST00000478050 BTLAQ7Z6A9 289 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 KBTBD3Q8NAB2 608 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 CCDC191Q8NCU4 936 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 SMC1BQ8NDV3 1235 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 KLHDC4Q8TBB5 520 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.82□□□□□ -1.48
SF3B6-202ENST00000478050 AKTIPQ9H8T0 292 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 TPCN1Q9ULQ1 816 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 NOL7Q9UMY1 257 aaKnown RBP5.82□□□□□ -1.48
SF3B6-202ENST00000478050 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.82□□□□□ -1.48
SF3B6-202ENST00000478050 NUP98P52948 1817 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 ARAP2Q8WZ64 1704 aa5.82□□□□□ -1.48
SF3B6-202ENST00000478050 ELP1O95163 1332 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 VPS37CA5D8V6 355 aaPredicted RBP5.81□□□□□ -1.48
SF3B6-202ENST00000478050 FIBPO43427 364 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 ZNF500O60304 480 aaPredicted RBP5.81□□□□□ -1.48
SF3B6-202ENST00000478050 OFD1O75665 1012 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 CIAO1O76071 339 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 HMGB1P09429 215 aaKnown RBP5.81□□□□□ -1.48
SF3B6-202ENST00000478050 CD97P48960 835 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 KRT85P78386 507 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 FOXO4P98177 505 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 NCOA4Q13772 614 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 LRRFIP1Q32MZ4 808 aaKnown RBP5.81□□□□□ -1.48
SF3B6-202ENST00000478050 MCMDC2Q4G0Z9 681 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 LARP1BQ659C4 914 aaKnown RBP5.81□□□□□ -1.48
SF3B6-202ENST00000478050 ELMSAN1Q6PJG2 1045 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 LMBR1LQ6UX01 489 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 TOM1L2Q6ZVM7 507 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 ZNF589Q86UQ0 364 aaPredicted RBP5.81□□□□□ -1.48
SF3B6-202ENST00000478050 TRIM50Q86XT4 487 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 TPCN2Q8NHX9 752 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 CHMP4CQ96CF2 233 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 NEK1Q96PY6 1258 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 DBNDD2Q9BQY9 259 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 CARD10Q9BWT7 1032 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 GSX2Q9BZM3 304 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 TSPAN10Q9H1Z9 355 aaPredicted RBP5.81□□□□□ -1.48
SF3B6-202ENST00000478050 NMRK2Q9NPI5 230 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms