RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 DTX1Q86Y01 620 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 SVIPQ8NHG7 77 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 PPP1R13LQ8WUF5 828 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 ATG4CQ96DT6 458 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 SEC16BQ96JE7 1060 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 NBPF4Q96M43 638 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 RPS6KC1Q96S38 1066 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 KIF2CQ99661 725 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 CNNM2Q9H8M5 875 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 CAPN10Q9HC96 672 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 MAP3K20Q9NYL2 800 aaKnown RBP4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 ERCC6Q03468 1493 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 FAM155AB1AL88 458 aaPredicted RBP4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 HYAL3O43820 417 aaPredicted RBP4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 PRNPP04156 253 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 ZNF865P0CJ78 1059 aaPredicted RBP4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 GBP1P32455 592 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 CCNFP41002 786 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 KIR3DL1P43629 444 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 NASPP49321 788 aaPredicted RBP4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 CHMP4BP1P59074 171 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 POU5F1BQ06416 359 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 BIRC2Q13490 618 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 HSP90AA2PQ14568 343 aaPredicted RBP4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 ZKSCAN8Q15776 578 aaPredicted RBP4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 CDC37Q16543 378 aaPredicted RBP4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 IFI16Q16666 785 aaKnown RBP4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 CC2D1BQ5T0F9 858 aaKnown RBP4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 VPS37DQ86XT2 251 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 PLD6Q8N2A8 252 aaKnown RBP4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 MFSD4AQ8N468 514 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 RBBP8NLQ8NC74 664 aaPredicted RBP4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 BAHD1Q8TBE0 780 aaPredicted RBP4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 MISP3Q96FF7 219 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 SLC39A13Q96H72 371 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 CRBNQ96SW2 442 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 RSPH9Q9H1X1 276 aaPredicted RBP4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 ANTXR1Q9H6X2 564 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 IFT122Q9HBG6 1241 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 ZFP64Q9NPA5 681 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 TMEM51Q9NW97 253 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 RAI14Q9P0K7 980 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 STRIP2Q9ULQ0 834 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 U3KQE9 123 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 HMGXB3Q12766 1538 aa4.35□□□□□ -1.71
FNDC3B-209ENST00000478016 TMEM265A0A087WTH1 108 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 CCDC189A1A4V9 331 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 CBX7O95931 251 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 FGAP02671 866 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 NME1P15531 152 aaKnown RBP4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 ATF4P18848 351 aaPredicted RBP4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 CLCN7P51798 805 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 EIF6P56537 245 aaKnown RBP4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 MAPRE1Q15691 268 aaKnown RBP4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 NKPD1Q17RQ9 610 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 INTS3Q68E01 1043 aaKnown RBP4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 CCDC81Q6ZN84 652 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 VSIG10LQ86VR7 867 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 SPACA3Q8IXA5 215 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 RPUSD2Q8IZ73 545 aaKnown RBP4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 STK11IPQ8N1F8 1099 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 TAB3Q8N5C8 712 aaPredicted RBP4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 ATL2Q8NHH9 583 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 RNF141Q8WVD5 230 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 CPLX3Q8WVH0 158 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 RELTQ969Z4 430 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 ZNF512BQ96KM6 892 aaPredicted RBP4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 KREMEN1Q96MU8 473 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 TM9SF2Q99805 663 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 TINF2Q9BSI4 451 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 ASPNQ9BXN1 380 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 SRRTQ9BXP5 876 aaKnown RBP4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.34□□□□□ -1.712e-8■■■■□ 23.5
FNDC3B-209ENST00000478016 TNKS2Q9H2K2 1166 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 SPC25Q9HBM1 224 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 CASS4Q9NQ75 786 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 ANGEL1Q9UNK9 670 aaKnown RBP4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 PLAGL2Q9UPG8 496 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 SNX11Q9Y5W9 270 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 CNTNAP4Q9C0A0 1308 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 ATAD2BQ9ULI0 1458 aa4.34□□□□□ -1.71
FNDC3B-209ENST00000478016 SMARCA2P51531 1590 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 BAZ1AQ9NRL2 1556 aaPredicted RBP4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 PRR33A8MZF0 331 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 TNFRSF10CO14798 259 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 TIMM44O43615 452 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 UBOX5O94941 541 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 WNT11O96014 354 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 APPP05067 770 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 CD53P19397 219 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 POLR2BP30876 1174 aaKnown RBP4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 RNF4P78317 190 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 PRKCQQ04759 706 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 NEXNQ0ZGT2 675 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 TCEAL1Q15170 157 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 CCDC144BQ3MJ40 725 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 CCDC184Q52MB2 194 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 CCSAPQ6IQ19 270 aaPredicted RBP4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 CCDC174Q6PII3 467 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 LSRQ86X29 649 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms