RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 PDE4AP27815 886 aa16.32■□□□□ 0.2
HDAC7-222ENST00000477937 CNGA1P29973 690 aa16.32■□□□□ 0.2
HDAC7-222ENST00000477937 CYP2C19P33261 490 aa16.32■□□□□ 0.2
HDAC7-222ENST00000477937 SLC1A4P43007 532 aa16.32■□□□□ 0.2
HDAC7-222ENST00000477937 HAND2P61296 217 aa16.32■□□□□ 0.2
HDAC7-222ENST00000477937 KCTD2Q14681 263 aa16.32■□□□□ 0.2
HDAC7-222ENST00000477937 LHX8Q68G74 356 aa16.32■□□□□ 0.2
HDAC7-222ENST00000477937 MFSD6Q6ZSS7 791 aa16.32■□□□□ 0.2
HDAC7-222ENST00000477937 CHURC1Q8WUH1 139 aa16.32■□□□□ 0.2
HDAC7-222ENST00000477937 GMCL1Q96IK5 515 aa16.32■□□□□ 0.2
HDAC7-222ENST00000477937 ALPK3Q96L96 1907 aa16.32■□□□□ 0.2
HDAC7-222ENST00000477937 NBPF3Q9H094 633 aa16.32■□□□□ 0.2
HDAC7-222ENST00000477937 NR2E3Q9Y5X4 410 aa16.32■□□□□ 0.2
HDAC7-222ENST00000477937 LAMA4Q16363 1823 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 TMEM232C9JQI7 657 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 H0YGN5 161 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 ATP2A1O14983 1001 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 MSCO60682 206 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 IGHA2P01877 340 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 FDX1P10109 184 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 MCCP23508 829 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 STAT2P52630 851 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 IKQ13123 557 aaPredicted RBP16.31■□□□□ 0.2
HDAC7-222ENST00000477937 AKNAD1Q5T1N1 836 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 SNRNP48Q6IEG0 339 aaKnown RBP16.31■□□□□ 0.2
HDAC7-222ENST00000477937 FAM160B2Q86V87 743 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 CPXCR1Q8N123 301 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 DIS3LQ8TF46 1054 aaKnown RBP16.31■□□□□ 0.2
HDAC7-222ENST00000477937 STAG1Q8WVM7 1258 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 MAML3Q96JK9 1138 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 SLC38A10Q9HBR0 1119 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 SMCHD1A6NHR9 2005 aa16.31■□□□□ 0.2
HDAC7-222ENST00000477937 ZNF213O14771 459 aa16.3■□□□□ 0.2
HDAC7-222ENST00000477937 EVI5O60447 810 aa16.3■□□□□ 0.2
HDAC7-222ENST00000477937 PGK2P07205 417 aa16.3■□□□□ 0.2
HDAC7-222ENST00000477937 NOVP48745 357 aa16.3■□□□□ 0.2
HDAC7-222ENST00000477937 SLC4A3P48751 1232 aa16.3■□□□□ 0.2
HDAC7-222ENST00000477937 TTC22Q5TAA0 569 aa16.3■□□□□ 0.2
HDAC7-222ENST00000477937 RCSD1Q6JBY9 416 aa16.3■□□□□ 0.2
HDAC7-222ENST00000477937 CHMP4CQ96CF2 233 aa16.3■□□□□ 0.2
HDAC7-222ENST00000477937 RNF41Q9H4P4 317 aaPredicted RBP16.3■□□□□ 0.2
HDAC7-222ENST00000477937 C11orf49Q9H6J7 331 aa16.3■□□□□ 0.2
HDAC7-222ENST00000477937 RAVER2Q9HCJ3 691 aaKnown RBP16.3■□□□□ 0.2
HDAC7-222ENST00000477937 TCP11L1Q9NUJ3 509 aa16.3■□□□□ 0.2
HDAC7-222ENST00000477937 CYBAP13498 195 aa16.29■□□□□ 0.2
HDAC7-222ENST00000477937 MNX1P50219 401 aaPredicted RBP16.29■□□□□ 0.2
HDAC7-222ENST00000477937 OAZ1P54368 228 aa16.29■□□□□ 0.2
HDAC7-222ENST00000477937 TRPV1Q8NER1 839 aa16.29■□□□□ 0.2
HDAC7-222ENST00000477937 DDX11Q96FC9 970 aa16.29■□□□□ 0.2
HDAC7-222ENST00000477937 DSCC1Q9BVC3 393 aa16.29■□□□□ 0.2
HDAC7-222ENST00000477937 DDX20Q9UHI6 824 aaKnown RBP16.29■□□□□ 0.2
HDAC7-222ENST00000477937 DIS3Q9Y2L1 958 aaKnown RBP16.29■□□□□ 0.2
HDAC7-222ENST00000477937 RIPK3Q9Y572 518 aa16.29■□□□□ 0.2
HDAC7-222ENST00000477937 PLA2G6O60733 806 aa16.28■□□□□ 0.2
HDAC7-222ENST00000477937 TOP1P11387 765 aaKnown RBP16.28■□□□□ 0.2
HDAC7-222ENST00000477937 GSPT1P15170 499 aaKnown RBP16.28■□□□□ 0.2
HDAC7-222ENST00000477937 ZNF792Q3KQV3 632 aa16.28■□□□□ 0.2
HDAC7-222ENST00000477937 KCTD1Q719H9 257 aa16.28■□□□□ 0.2
HDAC7-222ENST00000477937 ESR2Q92731 530 aa16.28■□□□□ 0.2
HDAC7-222ENST00000477937 FBXO40Q9UH90 709 aa16.28■□□□□ 0.2
HDAC7-222ENST00000477937 CTNNA3Q9UI47 895 aa16.28■□□□□ 0.2
HDAC7-222ENST00000477937 MTMR7Q9Y216 660 aa16.28■□□□□ 0.2
HDAC7-222ENST00000477937 SEPT4O43236 478 aa16.27■□□□□ 0.2
HDAC7-222ENST00000477937 NT5C2P49902 561 aa16.27■□□□□ 0.2
HDAC7-222ENST00000477937 PRAMEF19Q5SWL8 479 aa16.27■□□□□ 0.2
HDAC7-222ENST00000477937 TBC1D10CQ8IV04 446 aa16.27■□□□□ 0.2
HDAC7-222ENST00000477937 CHST13Q8NET6 341 aa16.27■□□□□ 0.2
HDAC7-222ENST00000477937 DCAF4Q8WV16 495 aa16.27■□□□□ 0.2
HDAC7-222ENST00000477937 TTC14Q96N46 770 aa16.27■□□□□ 0.2
HDAC7-222ENST00000477937 TMEM47Q9BQJ4 181 aa16.27■□□□□ 0.2
HDAC7-222ENST00000477937 NRBP1Q9UHY1 535 aa16.27■□□□□ 0.2
HDAC7-222ENST00000477937 IMMTQ16891 758 aaKnown RBP16.26■□□□□ 0.19
HDAC7-222ENST00000477937 CCDC96Q2M329 555 aa16.26■□□□□ 0.19
HDAC7-222ENST00000477937 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.26■□□□□ 0.19
HDAC7-222ENST00000477937 ANKRD35Q8N283 1001 aa16.26■□□□□ 0.19
HDAC7-222ENST00000477937 RUFY2Q8WXA3 655 aa16.26■□□□□ 0.19
HDAC7-222ENST00000477937 TINF2Q9BSI4 451 aa16.26■□□□□ 0.19
HDAC7-222ENST00000477937 MCM3APO60318 1980 aa16.26■□□□□ 0.19
HDAC7-222ENST00000477937 HABP4Q5JVS0 413 aaKnown RBP16.25■□□□□ 0.19
HDAC7-222ENST00000477937 IQCA1Q86XH1 822 aa16.25■□□□□ 0.19
HDAC7-222ENST00000477937 MSL3Q8N5Y2 521 aaKnown RBP16.25■□□□□ 0.19
HDAC7-222ENST00000477937 ARRDC4Q8NCT1 418 aa16.25■□□□□ 0.19
HDAC7-222ENST00000477937 PRR12Q9ULL5 1215 aa16.25■□□□□ 0.19
HDAC7-222ENST00000477937 COLQQ9Y215 455 aaPredicted RBP16.25■□□□□ 0.19
HDAC7-222ENST00000477937 PFASO15067 1338 aa16.24■□□□□ 0.19
HDAC7-222ENST00000477937 NEDD4P46934 1319 aa16.24■□□□□ 0.19
HDAC7-222ENST00000477937 RAD50Q92878 1312 aa16.24■□□□□ 0.19
HDAC7-222ENST00000477937 DNAJC25-GNG10A0A024R161 153 aa16.24■□□□□ 0.19
HDAC7-222ENST00000477937 COL6A1P12109 1028 aa16.24■□□□□ 0.19
HDAC7-222ENST00000477937 TKFCQ3LXA3 575 aa16.24■□□□□ 0.19
HDAC7-222ENST00000477937 CCDC178Q5BJE1 867 aa16.24■□□□□ 0.19
HDAC7-222ENST00000477937 AGBL1Q96MI9 1066 aa16.24■□□□□ 0.19
HDAC7-222ENST00000477937 ACAD9Q9H845 621 aa16.24■□□□□ 0.19
HDAC7-222ENST00000477937 HOMER2Q9NSB8 354 aa16.24■□□□□ 0.19
HDAC7-222ENST00000477937 CNPY2Q9Y2B0 182 aa16.24■□□□□ 0.19
HDAC7-222ENST00000477937 CEP290O15078 2479 aa16.24■□□□□ 0.19
HDAC7-222ENST00000477937 ZNF536O15090 1300 aa16.23■□□□□ 0.19
HDAC7-222ENST00000477937 DNM1LO00429 736 aa16.23■□□□□ 0.19
HDAC7-222ENST00000477937 KDM4AO75164 1064 aa16.23■□□□□ 0.19
HDAC7-222ENST00000477937 CHMLP26374 656 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms