RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 CALM1P0DP23 149 aa19.59■□□□□ 0.73
EPHB4-204ENST00000477446 CALM2P0DP24 149 aa19.59■□□□□ 0.73
EPHB4-204ENST00000477446 CALM3P0DP25 149 aa19.59■□□□□ 0.73
EPHB4-204ENST00000477446 COG2Q14746 738 aa19.59■□□□□ 0.73
EPHB4-204ENST00000477446 ASPRV1Q53RT3 343 aa19.59■□□□□ 0.73
EPHB4-204ENST00000477446 GPATCH4Q5T3I0 446 aaKnown RBP19.59■□□□□ 0.73
EPHB4-204ENST00000477446 TTBK2Q6IQ55 1244 aa19.59■□□□□ 0.73
EPHB4-204ENST00000477446 CCDC144CPQ8IYA2 1237 aa19.59■□□□□ 0.73
EPHB4-204ENST00000477446 STAG2Q8N3U4 1231 aa19.59■□□□□ 0.73
EPHB4-204ENST00000477446 MAP3K14Q99558 947 aa19.59■□□□□ 0.73
EPHB4-204ENST00000477446 P2RX7Q99572 595 aaKnown RBP19.59■□□□□ 0.73
EPHB4-204ENST00000477446 MAD2L2Q9UI95 211 aa19.59■□□□□ 0.73
EPHB4-204ENST00000477446 FEM1BQ9UK73 627 aa19.59■□□□□ 0.73
EPHB4-204ENST00000477446 PNMA3Q9UL41 463 aa19.59■□□□□ 0.73
EPHB4-204ENST00000477446 PALM3A6NDB9 673 aaPredicted RBP19.58■□□□□ 0.73
EPHB4-204ENST00000477446 STAT2P52630 851 aa19.58■□□□□ 0.73
EPHB4-204ENST00000477446 TAF1CQ15572 869 aaPredicted RBP19.58■□□□□ 0.73
EPHB4-204ENST00000477446 RNF186Q9NXI6 227 aa19.58■□□□□ 0.73
EPHB4-204ENST00000477446 GOLGA8BA8MQT2 603 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 PLA2G6O60733 806 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 BRD1O95696 1058 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 PDIA3P30101 505 aaKnown RBP19.57■□□□□ 0.72
EPHB4-204ENST00000477446 SLC16A2P36021 539 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 MAP2K1Q02750 393 aaPredicted RBP19.57■□□□□ 0.72
EPHB4-204ENST00000477446 IKQ13123 557 aaPredicted RBP19.57■□□□□ 0.72
EPHB4-204ENST00000477446 SAMD1Q6SPF0 538 aaPredicted RBP19.57■□□□□ 0.72
EPHB4-204ENST00000477446 NOL8Q76FK4 1167 aaKnown RBP19.57■□□□□ 0.72
EPHB4-204ENST00000477446 FANCBQ8NB91 859 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 CTCFLQ8NI51 663 aaPredicted RBP19.57■□□□□ 0.72
EPHB4-204ENST00000477446 CHURC1Q8WUH1 139 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 SLF1Q9BQI6 1058 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 HOXC10Q9NYD6 342 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 TPCN1Q9ULQ1 816 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 HPS5Q9UPZ3 1129 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 SPDYE16A6NNV3 312 aaPredicted RBP19.57■□□□□ 0.72
EPHB4-204ENST00000477446 KLRF2D3W0D1 207 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 CA12O43570 354 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 DSG3P32926 999 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 RCAN1P53805 252 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 HERVK_113P62684 666 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 POTEEQ6S8J3 1075 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 BTNL9Q6UXG8 535 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 FAM160B2Q86V87 743 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 PRPF38AQ8NAV1 312 aaKnown RBP19.57■□□□□ 0.72
EPHB4-204ENST00000477446 ZNF274Q96GC6 653 aaPredicted RBP19.57■□□□□ 0.72
EPHB4-204ENST00000477446 PARK7Q99497 189 aaKnown RBP19.57■□□□□ 0.72
EPHB4-204ENST00000477446 UBA5Q9GZZ9 404 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 CPVLQ9H3G5 476 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 PPP1R9AQ9ULJ8 1098 aa19.57■□□□□ 0.72
EPHB4-204ENST00000477446 MYPNQ86TC9 1320 aa19.56■□□□□ 0.72
EPHB4-204ENST00000477446 TRPA1O75762 1119 aa19.56■□□□□ 0.72
EPHB4-204ENST00000477446 KIF5BP33176 963 aa19.56■□□□□ 0.72
EPHB4-204ENST00000477446 CRHR2Q13324 411 aa19.56■□□□□ 0.72
EPHB4-204ENST00000477446 SMCR8Q8TEV9 937 aaPredicted RBP19.56■□□□□ 0.72
EPHB4-204ENST00000477446 KIFC2Q96AC6 838 aa19.56■□□□□ 0.72
EPHB4-204ENST00000477446 ZFYVE28Q9HCC9 887 aa19.56■□□□□ 0.72
EPHB4-204ENST00000477446 GOLGA8AA7E2F4 631 aa19.55■□□□□ 0.72
EPHB4-204ENST00000477446 METAP2P50579 478 aaKnown RBP eCLIP19.55■□□□□ 0.728e-7■■■□□ 16.3
EPHB4-204ENST00000477446 JMYQ8N9B5 988 aa19.55■□□□□ 0.72
EPHB4-204ENST00000477446 ATG4CQ96DT6 458 aa19.55■□□□□ 0.72
EPHB4-204ENST00000477446 FAM217BQ9NTX9 383 aaPredicted RBP19.55■□□□□ 0.72
EPHB4-204ENST00000477446 PRR12Q9ULL5 1215 aa19.55■□□□□ 0.72
EPHB4-204ENST00000477446 ADAMTS5Q9UNA0 930 aa19.55■□□□□ 0.72
EPHB4-204ENST00000477446 ZDHHC9Q9Y397 364 aa19.55■□□□□ 0.72
EPHB4-204ENST00000477446 COL11A1P12107 1806 aaPredicted RBP19.55■□□□□ 0.72
EPHB4-204ENST00000477446 CDC27P30260 824 aa19.54■□□□□ 0.72
EPHB4-204ENST00000477446 STK3Q13188 491 aa19.54■□□□□ 0.72
EPHB4-204ENST00000477446 RTN1Q16799 776 aa19.54■□□□□ 0.72
EPHB4-204ENST00000477446 KLHL40Q2TBA0 621 aa19.54■□□□□ 0.72
EPHB4-204ENST00000477446 SYDE2Q5VT97 1194 aa19.54■□□□□ 0.72
EPHB4-204ENST00000477446 LBX2Q6XYB7 198 aa19.54■□□□□ 0.72
EPHB4-204ENST00000477446 NBPF11Q86T75 865 aa19.54■□□□□ 0.72
EPHB4-204ENST00000477446 R3HDMLQ9H3Y0 253 aa19.54■□□□□ 0.72
EPHB4-204ENST00000477446 WBP1LQ9NX94 342 aa19.54■□□□□ 0.72
EPHB4-204ENST00000477446 NID2Q14112 1375 aa19.54■□□□□ 0.72
EPHB4-204ENST00000477446 ADGRA2Q96PE1 1338 aa19.54■□□□□ 0.72
EPHB4-204ENST00000477446 A0A0G2JMZ2 1700 aa19.54■□□□□ 0.72
EPHB4-204ENST00000477446 VWA5AO00534 786 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 TLR2O60603 784 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 PLEKHA8P1O95397 391 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 TBC1D8O95759 1140 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 CCT2P78371 535 aaKnown RBP19.53■□□□□ 0.72
EPHB4-204ENST00000477446 ME3Q16798 604 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 SLC35G1Q2M3R5 365 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 CFHR5Q9BXR6 569 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 RBM28Q9NW13 759 aaKnown RBP19.53■□□□□ 0.72
EPHB4-204ENST00000477446 RBPJLQ9UBG7 517 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 PEX10O60683 326 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 LARGE1O95461 756 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 ADD1P35611 737 aaKnown RBP19.53■□□□□ 0.72
EPHB4-204ENST00000477446 GCLCP48506 637 aaPredicted RBP19.53■□□□□ 0.72
EPHB4-204ENST00000477446 GNAQP50148 359 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 PPP2R5BQ15173 497 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 MCTP1Q6DN14 999 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 ADGRF4Q8IZF3 695 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 CMTR1Q8N1G2 835 aaKnown RBP19.53■□□□□ 0.72
EPHB4-204ENST00000477446 BEGAINQ9BUH8 593 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 NCOA5Q9HCD5 579 aaKnown RBP19.53■□□□□ 0.72
EPHB4-204ENST00000477446 TXNRD2Q9NNW7 524 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 SAGE1Q9NXZ1 904 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms