RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 MRS2Q9HD23 443 aa18.75■□□□□ 0.59
SMG5-204ENST00000476954 DIS3Q9Y2L1 958 aaKnown RBP18.75■□□□□ 0.59
SMG5-204ENST00000476954 NAV1Q8NEY1 1877 aa18.74■□□□□ 0.59
SMG5-204ENST00000476954 ZBBXA8MT70 800 aa18.74■□□□□ 0.59
SMG5-204ENST00000476954 PRR33A8MZF0 331 aa18.74■□□□□ 0.59
SMG5-204ENST00000476954 TLR3O15455 904 aaKnown RBP18.74■□□□□ 0.59
SMG5-204ENST00000476954 DUSP11O75319 330 aaKnown RBP18.74■□□□□ 0.59
SMG5-204ENST00000476954 SLC25A27O95847 323 aa18.74■□□□□ 0.59
SMG5-204ENST00000476954 ZAP70P43403 619 aa18.74■□□□□ 0.59
SMG5-204ENST00000476954 TTC39AQ5SRH9 613 aa18.74■□□□□ 0.59
SMG5-204ENST00000476954 TTC6Q86TZ1 520 aa18.74■□□□□ 0.59
SMG5-204ENST00000476954 DBNDD2Q9BQY9 259 aa18.74■□□□□ 0.59
SMG5-204ENST00000476954 HIPK3Q9H422 1215 aa18.74■□□□□ 0.59
SMG5-204ENST00000476954 FBXO28Q9NVF7 368 aa18.74■□□□□ 0.59
SMG5-204ENST00000476954 COL4A4P53420 1690 aaPredicted RBP18.73■□□□□ 0.59
SMG5-204ENST00000476954 SCN5AQ14524 2016 aa18.73■□□□□ 0.59
SMG5-204ENST00000476954 CTAGE5O15320 804 aa18.73■□□□□ 0.59
SMG5-204ENST00000476954 ATP2A2P16615 1042 aaKnown RBP18.73■□□□□ 0.59
SMG5-204ENST00000476954 SPRED2Q7Z698 418 aa18.73■□□□□ 0.59
SMG5-204ENST00000476954 RIOX2Q8IUF8 465 aa18.73■□□□□ 0.59
SMG5-204ENST00000476954 SIAH1Q8IUQ4 282 aa18.73■□□□□ 0.59
SMG5-204ENST00000476954 PCSK9Q8NBP7 692 aaKnown RBP18.73■□□□□ 0.59
SMG5-204ENST00000476954 BEX3Q00994 111 aa18.72■□□□□ 0.59
SMG5-204ENST00000476954 GABPAQ06546 454 aa18.72■□□□□ 0.59
SMG5-204ENST00000476954 GNASQ5JWF2 1037 aa18.72■□□□□ 0.59
SMG5-204ENST00000476954 ARNTL2Q8WYA1 636 aa18.72■□□□□ 0.59
SMG5-204ENST00000476954 SCLYQ96I15 445 aa18.72■□□□□ 0.59
SMG5-204ENST00000476954 NOC4LQ9BVI4 516 aaKnown RBP18.72■□□□□ 0.59
SMG5-204ENST00000476954 UPF3AQ9H1J1 476 aaKnown RBP18.72■□□□□ 0.59
SMG5-204ENST00000476954 MYH8P13535 1937 aa18.71■□□□□ 0.59
SMG5-204ENST00000476954 STAT3P40763 770 aa18.71■□□□□ 0.59
SMG5-204ENST00000476954 TTLL4Q14679 1199 aa18.71■□□□□ 0.59
SMG5-204ENST00000476954 TMEM67Q5HYA8 995 aa18.71■□□□□ 0.59
SMG5-204ENST00000476954 FBXL18Q96ME1 805 aa18.71■□□□□ 0.59
SMG5-204ENST00000476954 ADAMTS5Q9UNA0 930 aa18.71■□□□□ 0.59
SMG5-204ENST00000476954 CACNA1AO00555 2505 aa18.71■□□□□ 0.59
SMG5-204ENST00000476954 GJA9P57773 515 aa18.7■□□□□ 0.58
SMG5-204ENST00000476954 MTX1Q13505 466 aa18.7■□□□□ 0.58
SMG5-204ENST00000476954 ANKS1AQ92625 1134 aa18.7■□□□□ 0.58
SMG5-204ENST00000476954 TRPV6Q9H1D0 765 aa18.7■□□□□ 0.58
SMG5-204ENST00000476954 SMC4Q9NTJ3 1288 aa18.7■□□□□ 0.58
SMG5-204ENST00000476954 ZNF214Q9UL59 606 aaPredicted RBP18.7■□□□□ 0.58
SMG5-204ENST00000476954 ZNF318Q5VUA4 2279 aa18.7■□□□□ 0.58
SMG5-204ENST00000476954 IDH1O75874 414 aaKnown RBP18.69■□□□□ 0.58
SMG5-204ENST00000476954 TAP1Q03518 808 aa18.69■□□□□ 0.58
SMG5-204ENST00000476954 GRB10Q13322 594 aa18.69■□□□□ 0.58
SMG5-204ENST00000476954 ACVR2BQ13705 512 aa18.69■□□□□ 0.58
SMG5-204ENST00000476954 CCDC144BQ3MJ40 725 aa18.69■□□□□ 0.58
SMG5-204ENST00000476954 CXCL17Q6UXB2 119 aa18.69■□□□□ 0.58
SMG5-204ENST00000476954 MAGEB6Q8N7X4 407 aa18.69■□□□□ 0.58
SMG5-204ENST00000476954 SLC43A3Q8NBI5 491 aa18.69■□□□□ 0.58
SMG5-204ENST00000476954 REPS2Q8NFH8 660 aa18.69■□□□□ 0.58
SMG5-204ENST00000476954 VCPKMTQ9H867 229 aa18.69■□□□□ 0.58
SMG5-204ENST00000476954 HDAC5Q9UQL6 1122 aa18.69■□□□□ 0.58
SMG5-204ENST00000476954 TMX2Q9Y320 296 aa18.69■□□□□ 0.58
SMG5-204ENST00000476954 GRIN2DO15399 1336 aa18.69■□□□□ 0.58
SMG5-204ENST00000476954 LPXNO60711 386 aa18.68■□□□□ 0.58
SMG5-204ENST00000476954 POLR3DP05423 398 aaPredicted RBP18.68■□□□□ 0.58
SMG5-204ENST00000476954 CYP2D6P10635 497 aa18.68■□□□□ 0.58
SMG5-204ENST00000476954 PTGS1P23219 599 aa18.68■□□□□ 0.58
SMG5-204ENST00000476954 MAMDC4Q6UXC1 1216 aa18.68■□□□□ 0.58
SMG5-204ENST00000476954 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.68■□□□□ 0.58
SMG5-204ENST00000476954 NOB1Q9ULX3 412 aaKnown RBP18.68■□□□□ 0.58
SMG5-204ENST00000476954 PNMA6EA0A0J9YXQ4 647 aa18.67■□□□□ 0.58
SMG5-204ENST00000476954 VWA5AO00534 786 aa18.67■□□□□ 0.58
SMG5-204ENST00000476954 WDR46O15213 610 aaKnown RBP18.67■□□□□ 0.58
SMG5-204ENST00000476954 G3BP1Q13283 466 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMG5-204ENST00000476954 CCDC158Q5M9N0 1113 aa18.67■□□□□ 0.58
SMG5-204ENST00000476954 GJD3Q8N144 294 aa18.67■□□□□ 0.58
SMG5-204ENST00000476954 MSL3Q8N5Y2 521 aaKnown RBP18.67■□□□□ 0.58
SMG5-204ENST00000476954 FGD4Q96M96 766 aa18.67■□□□□ 0.58
SMG5-204ENST00000476954 PHOX2BQ99453 314 aa18.67■□□□□ 0.58
SMG5-204ENST00000476954 SPC25Q9HBM1 224 aa18.67■□□□□ 0.58
SMG5-204ENST00000476954 RIPK3Q9Y572 518 aa18.67■□□□□ 0.58
SMG5-204ENST00000476954 ASTN1O14525 1302 aa18.67■□□□□ 0.58
SMG5-204ENST00000476954 PTPRSQ13332 1948 aa18.66■□□□□ 0.58
SMG5-204ENST00000476954 DNAJC25-GNG10A0A024R161 153 aa18.66■□□□□ 0.58
SMG5-204ENST00000476954 B4GALT4O60513 344 aa18.66■□□□□ 0.58
SMG5-204ENST00000476954 AKR1B1P15121 316 aa18.66■□□□□ 0.58
SMG5-204ENST00000476954 TNNI3KQ59H18 835 aa18.66■□□□□ 0.58
SMG5-204ENST00000476954 TMEM179Q6ZVK1 233 aa18.66■□□□□ 0.58
SMG5-204ENST00000476954 FAM178BQ8IXR5 827 aa18.66■□□□□ 0.58
SMG5-204ENST00000476954 RPUSD2Q8IZ73 545 aaKnown RBP18.66■□□□□ 0.58
SMG5-204ENST00000476954 DYNLL2Q96FJ2 89 aa18.66■□□□□ 0.58
SMG5-204ENST00000476954 AGBL1Q96MI9 1066 aa18.66■□□□□ 0.58
SMG5-204ENST00000476954 FPGT-TNNI3KV9GXZ4 949 aa18.66■□□□□ 0.58
SMG5-204ENST00000476954 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.65■□□□□ 0.58
SMG5-204ENST00000476954 ICA1Q05084 483 aa18.65■□□□□ 0.58
SMG5-204ENST00000476954 ITGA7Q13683 1181 aa18.65■□□□□ 0.58
SMG5-204ENST00000476954 ALDH1L2Q3SY69 923 aa18.65■□□□□ 0.58
SMG5-204ENST00000476954 DEFB128Q7Z7B8 93 aa18.65■□□□□ 0.58
SMG5-204ENST00000476954 DDX11Q96FC9 970 aa18.65■□□□□ 0.58
SMG5-204ENST00000476954 RIOK1Q9BRS2 568 aaKnown RBP18.65■□□□□ 0.58
SMG5-204ENST00000476954 ANTXR1Q9H6X2 564 aa18.65■□□□□ 0.58
SMG5-204ENST00000476954 ARHGEF10LQ9HCE6 1279 aa18.65■□□□□ 0.58
SMG5-204ENST00000476954 PPP1R9AQ9ULJ8 1098 aa18.65■□□□□ 0.58
SMG5-204ENST00000476954 IL9P15248 144 aa18.64■□□□□ 0.57
SMG5-204ENST00000476954 SSTR3P32745 418 aaPredicted RBP18.64■□□□□ 0.57
SMG5-204ENST00000476954 SLC4A3P48751 1232 aa18.64■□□□□ 0.57
SMG5-204ENST00000476954 PSMC6P62333 389 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms