RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 ACER1Q8TDN7 264 aa13.8□□□□□ -0.2
XPC-205ENST00000476581 NUP88Q99567 741 aaPredicted RBP13.8□□□□□ -0.2
XPC-205ENST00000476581 ATAD5Q96QE3 1844 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 PHF20L1A8MW92 1017 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 H3BQV1 296 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 DHX16O60231 1041 aaKnown RBP13.79□□□□□ -0.2
XPC-205ENST00000476581 CCDC192P0DO97 292 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 PDHBP11177 359 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 SSRP1Q08945 709 aaKnown RBP13.79□□□□□ -0.2
XPC-205ENST00000476581 ABCB5Q2M3G0 1257 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 NOM1Q5C9Z4 860 aaKnown RBP13.79□□□□□ -0.2
XPC-205ENST00000476581 IFFO2Q5TF58 517 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 FKBP1CQ5VVH2 108 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 VPS54Q9P1Q0 977 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 TFIP11Q9UBB9 837 aaKnown RBP13.79□□□□□ -0.2
XPC-205ENST00000476581 SSC5DA1L4H1 1573 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 MYH15Q9Y2K3 1946 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 SOCS7O14512 581 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 TTLL1O95922 423 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 GRM4Q14833 912 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 FBXO38Q6PIJ6 1188 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 KCTD1Q719H9 257 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 C8orf76Q96K31 380 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 YY1AP1Q9H869 796 aa13.79□□□□□ -0.2
XPC-205ENST00000476581 POTECB2RU33 542 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 POTEIP0CG38 1075 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 POTEJP0CG39 1038 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 TOP1P11387 765 aaKnown RBP13.78□□□□□ -0.2
XPC-205ENST00000476581 LRMPQ12912 555 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 PRKG1Q13976 671 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 CEP135Q66GS9 1140 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 TYW1BQ6NUM6 668 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 FBXO18Q8NFZ0 1043 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 GPKOWQ92917 476 aaPredicted RBP eCLIP13.78□□□□□ -0.21e-7■■□□□ 13.9
XPC-205ENST00000476581 ZFP91Q96JP5 570 aaPredicted RBP13.78□□□□□ -0.2
XPC-205ENST00000476581 PALM3A6NDB9 673 aaPredicted RBP13.78□□□□□ -0.2
XPC-205ENST00000476581 ADM5C9JUS6 153 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 SLC16A2P36021 539 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 TPD52L1Q16890 204 aaPredicted RBP13.78□□□□□ -0.2
XPC-205ENST00000476581 SPICE1Q8N0Z3 855 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 CTCFLQ8NI51 663 aaPredicted RBP13.78□□□□□ -0.2
XPC-205ENST00000476581 FAM200AQ8TCP9 573 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 OXER1Q8TDS5 423 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 VAT1LQ9HCJ6 419 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 GPCPD1Q9NPB8 672 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 SMCHD1A6NHR9 2005 aa13.78□□□□□ -0.2
XPC-205ENST00000476581 TAL1P17542 331 aaPredicted RBP13.77□□□□□ -0.2
XPC-205ENST00000476581 INPP5BP32019 993 aa13.77□□□□□ -0.2
XPC-205ENST00000476581 CEBPZQ03701 1054 aaKnown RBP13.77□□□□□ -0.2
XPC-205ENST00000476581 RAD51AP2Q09MP3 1159 aa13.77□□□□□ -0.2
XPC-205ENST00000476581 KRT40Q6A162 431 aa13.77□□□□□ -0.2
XPC-205ENST00000476581 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.77□□□□□ -0.2
XPC-205ENST00000476581 ERO1AQ96HE7 468 aa13.77□□□□□ -0.2
XPC-205ENST00000476581 ST7Q9NRC1 585 aa13.77□□□□□ -0.2
XPC-205ENST00000476581 ZNF215Q9UL58 517 aaPredicted RBP13.77□□□□□ -0.2
XPC-205ENST00000476581 ICA1Q05084 483 aa13.77□□□□□ -0.21
XPC-205ENST00000476581 ZYXQ15942 572 aaKnown RBP13.77□□□□□ -0.21
XPC-205ENST00000476581 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.77□□□□□ -0.21
XPC-205ENST00000476581 FAM205CA6NFA0 338 aa13.77□□□□□ -0.21
XPC-205ENST00000476581 KLRF2D3W0D1 207 aa13.77□□□□□ -0.21
XPC-205ENST00000476581 FIBPO43427 364 aa13.77□□□□□ -0.21
XPC-205ENST00000476581 PDCP20941 246 aa13.77□□□□□ -0.21
XPC-205ENST00000476581 RCAN1P53805 252 aa13.77□□□□□ -0.21
XPC-205ENST00000476581 SNAP25P60880 206 aa13.77□□□□□ -0.21
XPC-205ENST00000476581 FMR1Q06787 632 aaKnown RBP eCLIP13.77□□□□□ -0.214e-6■■■■□ 19.7
XPC-205ENST00000476581 NR5A1Q13285 461 aa13.77□□□□□ -0.21
XPC-205ENST00000476581 BMS1Q14692 1282 aaKnown RBP13.77□□□□□ -0.21
XPC-205ENST00000476581 EARS2Q5JPH6 523 aaKnown RBP13.77□□□□□ -0.21
XPC-205ENST00000476581 HERC5Q9UII4 1024 aaKnown RBP13.77□□□□□ -0.21
XPC-205ENST00000476581 ZBTB21Q9ULJ3 1066 aa13.77□□□□□ -0.21
XPC-205ENST00000476581 ZKSCAN4Q969J2 545 aaPredicted RBP13.76□□□□□ -0.21
XPC-205ENST00000476581 CDKL5O76039 1030 aa13.76□□□□□ -0.21
XPC-205ENST00000476581 NPY5RQ15761 445 aa13.76□□□□□ -0.21
XPC-205ENST00000476581 ATP6V1DQ9Y5K8 247 aa13.76□□□□□ -0.21
XPC-205ENST00000476581 CALM1P0DP23 149 aa13.75□□□□□ -0.21
XPC-205ENST00000476581 CALM2P0DP24 149 aa13.75□□□□□ -0.21
XPC-205ENST00000476581 CALM3P0DP25 149 aa13.75□□□□□ -0.21
XPC-205ENST00000476581 SNHG28P0DPA3 235 aa13.75□□□□□ -0.21
XPC-205ENST00000476581 CAP2P40123 477 aa13.75□□□□□ -0.21
XPC-205ENST00000476581 KIF23Q02241 960 aaPredicted RBP13.75□□□□□ -0.21
XPC-205ENST00000476581 MAP3K10Q02779 954 aa13.75□□□□□ -0.21
XPC-205ENST00000476581 TMEM179Q6ZVK1 233 aa13.75□□□□□ -0.21
XPC-205ENST00000476581 HOMER1Q86YM7 354 aa13.75□□□□□ -0.21
XPC-205ENST00000476581 CCDC17Q96LX7 622 aa13.75□□□□□ -0.21
XPC-205ENST00000476581 TRERF1Q96PN7 1200 aa13.75□□□□□ -0.21
XPC-205ENST00000476581 RBM28Q9NW13 759 aaKnown RBP13.75□□□□□ -0.21
XPC-205ENST00000476581 ZNF446Q9NWS9 450 aa13.75□□□□□ -0.21
XPC-205ENST00000476581 STK36Q9NRP7 1315 aa13.75□□□□□ -0.21
XPC-205ENST00000476581 CCDC196A0A1B0GTZ2 297 aa13.75□□□□□ -0.21
XPC-205ENST00000476581 BTBD18B2RXH4 712 aa13.75□□□□□ -0.21
XPC-205ENST00000476581 PRPF3O43395 683 aaKnown RBP13.75□□□□□ -0.21
XPC-205ENST00000476581 RNF26Q9BY78 433 aaPredicted RBP13.75□□□□□ -0.21
XPC-205ENST00000476581 WNT7AO00755 349 aa13.74□□□□□ -0.21
XPC-205ENST00000476581 DEXIO95424 95 aa13.74□□□□□ -0.21
XPC-205ENST00000476581 PARP1P09874 1014 aaKnown RBP13.74□□□□□ -0.21
XPC-205ENST00000476581 MUM1L1Q5H9M0 696 aa13.74□□□□□ -0.21
XPC-205ENST00000476581 CPLX2Q6PUV4 134 aaKnown RBP13.74□□□□□ -0.21
XPC-205ENST00000476581 PLA2G4DQ86XP0 818 aa13.74□□□□□ -0.21
XPC-205ENST00000476581 KANSL2Q9H9L4 492 aa13.74□□□□□ -0.21
XPC-205ENST00000476581 ADARB2Q9NS39 739 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms