RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 KIF18AQ8NI77 898 aa10.12□□□□□ -0.79
CCDC66-216ENST00000476142 RRP36Q96EU6 259 aaKnown RBP10.12□□□□□ -0.79
CCDC66-216ENST00000476142 LZTS2Q9BRK4 669 aa10.12□□□□□ -0.79
CCDC66-216ENST00000476142 TMEM60Q9H2L4 133 aa10.12□□□□□ -0.79
CCDC66-216ENST00000476142 USP17L5A8MUK1 530 aa10.12□□□□□ -0.79
CCDC66-216ENST00000476142 LONP1P36776 959 aaKnown RBP10.12□□□□□ -0.79
CCDC66-216ENST00000476142 LETM2Q2VYF4 491 aa10.12□□□□□ -0.79
CCDC66-216ENST00000476142 SOGA3Q5TF21 947 aa10.12□□□□□ -0.79
CCDC66-216ENST00000476142 SPATA1Q5VX52 437 aa10.12□□□□□ -0.79
CCDC66-216ENST00000476142 ARL6IP4Q66PJ3 421 aaKnown RBP10.12□□□□□ -0.79
CCDC66-216ENST00000476142 SPECC1LQ69YQ0 1117 aa10.12□□□□□ -0.79
CCDC66-216ENST00000476142 PDXDC2PQ6P474 469 aa10.12□□□□□ -0.79
CCDC66-216ENST00000476142 MTERF4Q7Z6M4 381 aaKnown RBP10.12□□□□□ -0.79
CCDC66-216ENST00000476142 CLEC10AQ8IUN9 316 aa10.12□□□□□ -0.79
CCDC66-216ENST00000476142 SP8Q8IXZ3 490 aa10.12□□□□□ -0.79
CCDC66-216ENST00000476142 PIGSQ96S52 555 aa10.12□□□□□ -0.79
CCDC66-216ENST00000476142 TTF2Q9UNY4 1162 aaKnown RBP10.12□□□□□ -0.79
CCDC66-216ENST00000476142 MAPK8IP1Q9UQF2 711 aa10.12□□□□□ -0.79
CCDC66-216ENST00000476142 NAV1Q8NEY1 1877 aa10.12□□□□□ -0.79
CCDC66-216ENST00000476142 GAKO14976 1311 aa10.12□□□□□ -0.79
CCDC66-216ENST00000476142 SMCO2A6NFE2 343 aa10.11□□□□□ -0.79
CCDC66-216ENST00000476142 CCNT1O60563 726 aaKnown RBP10.11□□□□□ -0.79
CCDC66-216ENST00000476142 ATP2B2Q01814 1243 aa10.11□□□□□ -0.79
CCDC66-216ENST00000476142 NAA30Q147X3 362 aaPredicted RBP10.11□□□□□ -0.79
CCDC66-216ENST00000476142 DPP8Q6V1X1 898 aaPredicted RBP10.11□□□□□ -0.79
CCDC66-216ENST00000476142 SYT10Q6XYQ8 523 aa10.11□□□□□ -0.79
CCDC66-216ENST00000476142 PROM2Q8N271 834 aa10.11□□□□□ -0.79
CCDC66-216ENST00000476142 C4orf32Q8N8J7 132 aa10.11□□□□□ -0.79
CCDC66-216ENST00000476142 PYM1Q9BRP8 204 aaKnown RBP10.11□□□□□ -0.79
CCDC66-216ENST00000476142 ATP6V0A2Q9Y487 856 aa10.11□□□□□ -0.79
CCDC66-216ENST00000476142 PSDA5PKW4 1024 aaPredicted RBP10.11□□□□□ -0.79
CCDC66-216ENST00000476142 PPP1R3GB7ZBB8 358 aa10.11□□□□□ -0.79
CCDC66-216ENST00000476142 CTIFO43310 598 aaKnown RBP10.11□□□□□ -0.79
CCDC66-216ENST00000476142 GTPBP6O43824 516 aaPredicted RBP10.11□□□□□ -0.79
CCDC66-216ENST00000476142 UBA7P41226 1012 aa10.11□□□□□ -0.79
CCDC66-216ENST00000476142 MSL1Q68DK7 614 aa10.11□□□□□ -0.79
CCDC66-216ENST00000476142 FAM163AQ96GL9 167 aaPredicted RBP10.11□□□□□ -0.79
CCDC66-216ENST00000476142 MTRQ99707 1265 aa10.11□□□□□ -0.79
CCDC66-216ENST00000476142 COA1Q9GZY4 146 aa10.11□□□□□ -0.79
CCDC66-216ENST00000476142 TMX4Q9H1E5 349 aaPredicted RBP10.11□□□□□ -0.79
CCDC66-216ENST00000476142 UBR3Q6ZT12 1888 aa10.11□□□□□ -0.79
CCDC66-216ENST00000476142 M0R2N6 131 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 TEX33O43247 280 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 JAKMIP3Q5VZ66 844 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 GALNT17Q6IS24 598 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 FAM177A1Q8N128 213 aaPredicted RBP10.1□□□□□ -0.79
CCDC66-216ENST00000476142 CERS5Q8N5B7 392 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 CCDC12Q8WUD4 166 aaPredicted RBP10.1□□□□□ -0.79
CCDC66-216ENST00000476142 CPLX3Q8WVH0 158 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 BAG1Q99933 345 aaPredicted RBP10.1□□□□□ -0.79
CCDC66-216ENST00000476142 SPZ1Q9BXG8 430 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 C6orf50Q9HD87 102 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 GPCPD1Q9NPB8 672 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 USP40Q9NVE5 1235 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.1□□□□□ -0.79
CCDC66-216ENST00000476142 V9GYY5 206 aaPredicted RBP10.1□□□□□ -0.79
CCDC66-216ENST00000476142 KIF2AO00139 706 aaPredicted RBP10.1□□□□□ -0.79
CCDC66-216ENST00000476142 MPHOSPH10O00566 681 aaKnown RBP10.1□□□□□ -0.79
CCDC66-216ENST00000476142 RAD21O60216 631 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 AKR1B1P15121 316 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 CCT6AP40227 531 aaKnown RBP10.1□□□□□ -0.79
CCDC66-216ENST00000476142 PDCL2Q8N4E4 241 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 DAGLBQ8NCG7 672 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 ZNF622Q969S3 477 aaKnown RBP eCLIP10.1□□□□□ -0.79
CCDC66-216ENST00000476142 DDX4Q9NQI0 724 aaKnown RBP10.1□□□□□ -0.79
CCDC66-216ENST00000476142 DISC1Q9NRI5 854 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 KCND1Q9NSA2 647 aa10.1□□□□□ -0.79
CCDC66-216ENST00000476142 ZNF219Q9P2Y4 722 aaPredicted RBP10.1□□□□□ -0.79
CCDC66-216ENST00000476142 BIN2Q9UBW5 565 aaPredicted RBP10.1□□□□□ -0.79
CCDC66-216ENST00000476142 CCP110O43303 1012 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 RPN1P04843 607 aaKnown RBP10.09□□□□□ -0.79
CCDC66-216ENST00000476142 SRGNP10124 158 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 NCBP1Q09161 790 aaKnown RBP10.09□□□□□ -0.79
CCDC66-216ENST00000476142 NR1I3Q14994 352 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 NONOQ15233 471 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCDC66-216ENST00000476142 TMC4Q7Z404 712 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 COL23A1Q86Y22 540 aaPredicted RBP10.09□□□□□ -0.79
CCDC66-216ENST00000476142 GDAQ9Y2T3 454 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 A0A1B0GTH6 734 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 KLRG2A4D1S0 409 aaPredicted RBP10.09□□□□□ -0.79
CCDC66-216ENST00000476142 MMP10P09238 476 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 NPR1P16066 1061 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 GNA11P29992 359 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 TBX2Q13207 712 aaPredicted RBP10.09□□□□□ -0.79
CCDC66-216ENST00000476142 FILIP1LQ4L180 1135 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 KRT25Q7Z3Z0 450 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 PPFIBP1Q86W92 1011 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 NLGN1Q8N2Q7 840 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 NELFBQ8WX92 580 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 ZMYND12Q9H0C1 365 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 TMX1Q9H3N1 280 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 RMND1Q9NWS8 449 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 TMEM260Q9NX78 707 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 DNAI1Q9UI46 699 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 ZNF215Q9UL58 517 aaPredicted RBP10.09□□□□□ -0.79
CCDC66-216ENST00000476142 DDX60LQ5H9U9 1706 aaKnown RBP10.09□□□□□ -0.79
CCDC66-216ENST00000476142 APBA3O96018 575 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 PDHBP11177 359 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 KCNJ6P48051 423 aa10.09□□□□□ -0.79
CCDC66-216ENST00000476142 PAK1Q13153 545 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms