RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 DNM1Q05193 864 aaKnown RBP5.39□□□□□ -1.55
VPS13D-206ENST00000476045 ERICH6BQ5W0A0 696 aa5.39□□□□□ -1.55
VPS13D-206ENST00000476045 PNMA8AQ86V59 439 aaPredicted RBP5.39□□□□□ -1.55
VPS13D-206ENST00000476045 GPC2Q8N158 579 aa5.39□□□□□ -1.55
VPS13D-206ENST00000476045 Q8N3U1 123 aa5.39□□□□□ -1.55
VPS13D-206ENST00000476045 TMEM102Q8N9M5 508 aaPredicted RBP5.39□□□□□ -1.55
VPS13D-206ENST00000476045 SUPT20HQ8NEM7 779 aa5.39□□□□□ -1.55
VPS13D-206ENST00000476045 JDP2Q8WYK2 163 aa5.39□□□□□ -1.55
VPS13D-206ENST00000476045 PMEPA1Q969W9 287 aa5.39□□□□□ -1.55
VPS13D-206ENST00000476045 RUNDC1Q96C34 613 aa5.39□□□□□ -1.55
VPS13D-206ENST00000476045 RBM17Q96I25 401 aaKnown RBP5.39□□□□□ -1.55
VPS13D-206ENST00000476045 CRAMP1Q96RY5 1269 aa5.39□□□□□ -1.55
VPS13D-206ENST00000476045 POP1Q99575 1024 aaKnown RBP5.39□□□□□ -1.55
VPS13D-206ENST00000476045 BHLHE41Q9C0J9 482 aaPredicted RBP5.39□□□□□ -1.55
VPS13D-206ENST00000476045 KANSL3Q9P2N6 904 aa5.39□□□□□ -1.55
VPS13D-206ENST00000476045 SOX13Q9UN79 622 aa5.39□□□□□ -1.55
VPS13D-206ENST00000476045 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.39□□□□□ -1.55
VPS13D-206ENST00000476045 UBN2Q6ZU65 1347 aa5.39□□□□□ -1.55
VPS13D-206ENST00000476045 SPEF2Q9C093 1822 aa5.39□□□□□ -1.55
VPS13D-206ENST00000476045 ZNF609O15014 1411 aa5.39□□□□□ -1.55
VPS13D-206ENST00000476045 A0A1B0GUL6 1792 aa5.38□□□□□ -1.55
VPS13D-206ENST00000476045 CARNS1A5YM72 827 aa5.38□□□□□ -1.55
VPS13D-206ENST00000476045 TNFRSF21O75509 655 aa5.38□□□□□ -1.55
VPS13D-206ENST00000476045 IREB2P48200 963 aaKnown RBP5.38□□□□□ -1.55
VPS13D-206ENST00000476045 PIP4K2AP48426 406 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-206ENST00000476045 PRSS36Q5K4E3 855 aa5.38□□□□□ -1.55
VPS13D-206ENST00000476045 CEP135Q66GS9 1140 aa5.38□□□□□ -1.55
VPS13D-206ENST00000476045 ZNF34Q8IZ26 560 aa5.38□□□□□ -1.55
VPS13D-206ENST00000476045 KLHL23Q8NBE8 558 aa5.38□□□□□ -1.55
VPS13D-206ENST00000476045 UTP14AQ9BVJ6 771 aaKnown RBP5.38□□□□□ -1.55
VPS13D-206ENST00000476045 AKTIPQ9H8T0 292 aa5.38□□□□□ -1.55
VPS13D-206ENST00000476045 DDX21Q9NR30 783 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS13D-206ENST00000476045 SH3TC1Q8TE82 1336 aa5.38□□□□□ -1.55
VPS13D-206ENST00000476045 COL4A5P29400 1685 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 ARAP2Q8WZ64 1704 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 ECM29Q5VYK3 1845 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 A6NHS1 94 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 H3BRJ5 948 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 FZD9O00144 591 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 CHL1O00533 1208 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 IGHA2P01877 340 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 MYL6BP14649 208 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 ACPPP15309 386 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 CES1P23141 567 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 PRELPP51888 382 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 EIF6P56537 245 aaKnown RBP5.37□□□□□ -1.55
VPS13D-206ENST00000476045 ARHGAP4P98171 946 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 HLFQ16534 295 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 TTLL7Q6ZT98 887 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 LRP10Q7Z4F1 713 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 NCAPG2Q86XI2 1143 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 NIM1KQ8IY84 436 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 DNAJC5GQ8N7S2 189 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 RETREG2Q8NC44 543 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 TP53INP1Q96A56 240 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 THUMPD2Q9BTF0 503 aaKnown RBP5.37□□□□□ -1.55
VPS13D-206ENST00000476045 TAF1DQ9H5J8 278 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-206ENST00000476045 OSGEPQ9NPF4 335 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 IFT57Q9NWB7 429 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 HYPKQ9NX55 129 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 DBF4Q9UBU7 674 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-206ENST00000476045 HACL1Q9UJ83 578 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 RRP7AQ9Y3A4 280 aaKnown RBP5.37□□□□□ -1.55
VPS13D-206ENST00000476045 ABCC4O15439 1325 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 PASKQ96RG2 1323 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 ZNF541Q9H0D2 1346 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 CNTNAP1P78357 1384 aa5.37□□□□□ -1.55
VPS13D-206ENST00000476045 PDE4DIPQ5VU43 2346 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 FSCN2O14926 492 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 ADAM11O75078 769 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 WISP1O95388 367 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 GPTP24298 496 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 GNAI1P63096 354 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 ZNF211Q13398 564 aaPredicted RBP5.36□□□□□ -1.55
VPS13D-206ENST00000476045 SLC10A5Q5PT55 438 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 PEAR1Q5VY43 1037 aaPredicted RBP5.36□□□□□ -1.55
VPS13D-206ENST00000476045 PRR23CQ6ZRP0 262 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 DDX46Q7L014 1031 aaKnown RBP5.36□□□□□ -1.55
VPS13D-206ENST00000476045 SLC51AQ86UW1 340 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 PLBD2Q8NHP8 589 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 FOXD4L4Q8WXT5 416 aaPredicted RBP5.36□□□□□ -1.55
VPS13D-206ENST00000476045 FAM129BQ96TA1 746 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 RTFDC1Q9BY42 306 aaPredicted RBP5.36□□□□□ -1.55
VPS13D-206ENST00000476045 ZNF277Q9NRM2 450 aaPredicted RBP5.36□□□□□ -1.55
VPS13D-206ENST00000476045 KCNK4Q9NYG8 393 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 MIS18AQ9NYP9 233 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 ATP6V0A2Q9Y487 856 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 FANCIQ9NVI1 1328 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 LAMB1P07942 1786 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 ZNF646O15015 1829 aaPredicted RBP5.36□□□□□ -1.55
VPS13D-206ENST00000476045 SCN9AQ15858 1988 aa5.36□□□□□ -1.55
VPS13D-206ENST00000476045 AKAP11Q9UKA4 1901 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 FAM177BA6PVY3 158 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 LINC01387J3KSC0 135 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 PDE2AO00408 941 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-206ENST00000476045 EREGO14944 169 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 PPIP5K2O43314 1243 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 BBOX1O75936 387 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 DDNO94850 711 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-206ENST00000476045 DDX58O95786 925 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms