RNA–Protein interactions for RNA: ENST00000475930.1

SNAP47-207, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 792 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-207ENST00000475930 TRIM43Q96BQ3 446 aaPredicted RBP16.44■□□□□ 0.22
SNAP47-207ENST00000475930 GUCD1Q96NT3 240 aa16.44■□□□□ 0.22
SNAP47-207ENST00000475930 ZNF287Q9HBT7 754 aa16.44■□□□□ 0.22
SNAP47-207ENST00000475930 TACC3Q9Y6A5 838 aa16.44■□□□□ 0.22
SNAP47-207ENST00000475930 IGKV6D-41A0A0C4DH26 115 aa16.43■□□□□ 0.22
SNAP47-207ENST00000475930 ATP2A1O14983 1001 aa16.43■□□□□ 0.22
SNAP47-207ENST00000475930 NDUFB10O96000 172 aa16.43■□□□□ 0.22
SNAP47-207ENST00000475930 PGK1P00558 417 aa16.43■□□□□ 0.22
SNAP47-207ENST00000475930 C9orf50Q5SZB4 431 aa16.43■□□□□ 0.22
SNAP47-207ENST00000475930 ZNF697Q5TEC3 545 aa16.43■□□□□ 0.22
SNAP47-207ENST00000475930 SNRNP48Q6IEG0 339 aaKnown RBP16.43■□□□□ 0.22
SNAP47-207ENST00000475930 SH3RF1Q7Z6J0 888 aa16.43■□□□□ 0.22
SNAP47-207ENST00000475930 MKL1Q969V6 931 aa16.43■□□□□ 0.22
SNAP47-207ENST00000475930 NUP88Q99567 741 aaPredicted RBP16.43■□□□□ 0.22
SNAP47-207ENST00000475930 SYNPO2Q9UMS6 1093 aa16.43■□□□□ 0.22
SNAP47-207ENST00000475930 SYNGAP1Q96PV0 1343 aa16.43■□□□□ 0.22
SNAP47-207ENST00000475930 A0A1W2PQ45 241 aaPredicted RBP16.42■□□□□ 0.22
SNAP47-207ENST00000475930 A0A1W2PQY0 241 aa16.42■□□□□ 0.22
SNAP47-207ENST00000475930 GPAA1O43292 621 aa16.42■□□□□ 0.22
SNAP47-207ENST00000475930 MAMDC4Q6UXC1 1216 aa16.42■□□□□ 0.22
SNAP47-207ENST00000475930 ZNF444Q8N0Y2 327 aaPredicted RBP16.42■□□□□ 0.22
SNAP47-207ENST00000475930 STK11IPQ8N1F8 1099 aa16.42■□□□□ 0.22
SNAP47-207ENST00000475930 DDX11Q96FC9 970 aa16.42■□□□□ 0.22
SNAP47-207ENST00000475930 TSEN34Q9BSV6 310 aaKnown RBP16.42■□□□□ 0.22
SNAP47-207ENST00000475930 CLIP2Q9UDT6 1046 aa16.42■□□□□ 0.22
SNAP47-207ENST00000475930 RIPK3Q9Y572 518 aa16.42■□□□□ 0.22
SNAP47-207ENST00000475930 MUC3AQ02505 3323 aa16.42■□□□□ 0.22
SNAP47-207ENST00000475930 DNAJC25-GNG10A0A024R161 153 aa16.41■□□□□ 0.22
SNAP47-207ENST00000475930 ZBED4O75132 1171 aa16.41■□□□□ 0.22
SNAP47-207ENST00000475930 ADAMTS4O75173 837 aa16.41■□□□□ 0.22
SNAP47-207ENST00000475930 CLTBP09497 229 aa16.41■□□□□ 0.22
SNAP47-207ENST00000475930 TDO2P48775 406 aa16.41■□□□□ 0.22
SNAP47-207ENST00000475930 LRRFIP1Q32MZ4 808 aaKnown RBP16.41■□□□□ 0.22
SNAP47-207ENST00000475930 TSHZ3Q63HK5 1081 aa16.41■□□□□ 0.22
SNAP47-207ENST00000475930 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.41■□□□□ 0.22
SNAP47-207ENST00000475930 ZNF467Q7Z7K2 595 aaPredicted RBP16.41■□□□□ 0.22
SNAP47-207ENST00000475930 FAM161BQ96MY7 647 aa16.41■□□□□ 0.22
SNAP47-207ENST00000475930 EPB41L4AQ9HCS5 686 aaPredicted RBP16.41■□□□□ 0.22
SNAP47-207ENST00000475930 MTMR4Q9NYA4 1195 aa16.41■□□□□ 0.22
SNAP47-207ENST00000475930 PATL2C9JE40 543 aaKnown RBP16.4■□□□□ 0.22
SNAP47-207ENST00000475930 KIAA0355O15063 1070 aa16.4■□□□□ 0.22
SNAP47-207ENST00000475930 SNAI1O95863 264 aaPredicted RBP16.4■□□□□ 0.22
SNAP47-207ENST00000475930 TTLL1O95922 423 aa16.4■□□□□ 0.22
SNAP47-207ENST00000475930 APPP05067 770 aa16.4■□□□□ 0.22
SNAP47-207ENST00000475930 SMAD3P84022 425 aaKnown RBP16.4■□□□□ 0.22
SNAP47-207ENST00000475930 CPXCR1Q8N123 301 aa16.4■□□□□ 0.22
SNAP47-207ENST00000475930 GMCL1P1Q8NEA9 526 aa16.4■□□□□ 0.22
SNAP47-207ENST00000475930 NUP133Q8WUM0 1156 aa16.4■□□□□ 0.22
SNAP47-207ENST00000475930 CEP95Q96GE4 821 aa16.4■□□□□ 0.22
SNAP47-207ENST00000475930 TOX2Q96NM4 488 aa16.4■□□□□ 0.22
SNAP47-207ENST00000475930 SLC38A10Q9HBR0 1119 aa16.4■□□□□ 0.22
SNAP47-207ENST00000475930 FEM1BQ9UK73 627 aa16.4■□□□□ 0.22
SNAP47-207ENST00000475930 FAM184BQ9ULE4 1060 aa16.4■□□□□ 0.22
SNAP47-207ENST00000475930 CTDP1Q9Y5B0 961 aaPredicted RBP16.4■□□□□ 0.22
SNAP47-207ENST00000475930 MYH4Q9Y623 1939 aa16.4■□□□□ 0.22
SNAP47-207ENST00000475930 MOXD2PA6NHM9 499 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 M0R2C6 588 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 PQBP1O60828 265 aaKnown RBP16.39■□□□□ 0.21
SNAP47-207ENST00000475930 PRDM1O75626 825 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 ITGB8P26012 769 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 ACLYP53396 1101 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 OAZ1P54368 228 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 ANKRD33Q7Z3H0 272 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 IFNL3Q8IZI9 196 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 KLHDC9Q8NEP7 349 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 KIFC2Q96AC6 838 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 LENG1Q96BZ8 264 aaPredicted RBP16.39■□□□□ 0.21
SNAP47-207ENST00000475930 NACAP1Q9BZK3 213 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 SEMA6BQ9H3T3 888 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 FBXO40Q9UH90 709 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 TTC41PQ6P2S7 1318 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 SYNRGQ9UMZ2 1314 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 CHD9Q3L8U1 2897 aa16.39■□□□□ 0.21
SNAP47-207ENST00000475930 DUSP11O75319 330 aaKnown RBP16.38■□□□□ 0.21
SNAP47-207ENST00000475930 PDE4BQ07343 736 aa16.38■□□□□ 0.21
SNAP47-207ENST00000475930 CCSAPQ6IQ19 270 aaPredicted RBP16.38■□□□□ 0.21
SNAP47-207ENST00000475930 ANKRD35Q8N283 1001 aa16.38■□□□□ 0.21
SNAP47-207ENST00000475930 CHST13Q8NET6 341 aa16.38■□□□□ 0.21
SNAP47-207ENST00000475930 NEDD1Q8NHV4 660 aa16.38■□□□□ 0.21
SNAP47-207ENST00000475930 RAVER2Q9HCJ3 691 aaKnown RBP16.38■□□□□ 0.21
SNAP47-207ENST00000475930 STARD7Q9NQZ5 370 aa16.38■□□□□ 0.21
SNAP47-207ENST00000475930 TMEM39AQ9NV64 488 aa16.38■□□□□ 0.21
SNAP47-207ENST00000475930 ZHX1Q9UKY1 873 aaPredicted RBP16.38■□□□□ 0.21
SNAP47-207ENST00000475930 PLIN4Q96Q06 1357 aa16.38■□□□□ 0.21
SNAP47-207ENST00000475930 DCDC2CA8MYV0 355 aa16.37■□□□□ 0.21
SNAP47-207ENST00000475930 ERC2O15083 957 aa16.37■□□□□ 0.21
SNAP47-207ENST00000475930 SLC3A2P08195 630 aaKnown RBP16.37■□□□□ 0.21
SNAP47-207ENST00000475930 TSPY3P0CV98 308 aa16.37■□□□□ 0.21
SNAP47-207ENST00000475930 TSPY8P0CW00 308 aa16.37■□□□□ 0.21
SNAP47-207ENST00000475930 FDX1P10109 184 aa16.37■□□□□ 0.21
SNAP47-207ENST00000475930 RAG1P15918 1043 aa16.37■□□□□ 0.21
SNAP47-207ENST00000475930 CST5P28325 142 aaPredicted RBP16.37■□□□□ 0.21
SNAP47-207ENST00000475930 SLC4A3P48751 1232 aa16.37■□□□□ 0.21
SNAP47-207ENST00000475930 FAAP100Q0VG06 881 aa16.37■□□□□ 0.21
SNAP47-207ENST00000475930 ACVR2BQ13705 512 aa16.37■□□□□ 0.21
SNAP47-207ENST00000475930 KCNA10Q16322 511 aa16.37■□□□□ 0.21
SNAP47-207ENST00000475930 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.37■□□□□ 0.21
SNAP47-207ENST00000475930 LRRC47Q8N1G4 583 aaKnown RBP16.37■□□□□ 0.21
SNAP47-207ENST00000475930 CDX2Q99626 313 aaPredicted RBP16.37■□□□□ 0.21
SNAP47-207ENST00000475930 ABHD16BQ9H3Z7 469 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms