RNA–Protein interactions for RNA: ENST00000475662.5

CENPA-206, Transcript of centromere protein A, humanhuman

TSL 2

Gene CENPA, Length 1,208 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-206ENST00000475662 PPP1R12CQ9BZL4 782 aa18.23■□□□□ 0.51
CENPA-206ENST00000475662 ZHX1Q9UKY1 873 aaPredicted RBP18.23■□□□□ 0.51
CENPA-206ENST00000475662 SMCHD1A6NHR9 2005 aa18.23■□□□□ 0.51
CENPA-206ENST00000475662 SYNGAP1Q96PV0 1343 aa18.23■□□□□ 0.51
CENPA-206ENST00000475662 TCRBV5S4A2TA0A5A2 114 aa18.22■□□□□ 0.51
CENPA-206ENST00000475662 SMIM22K7EJ46 135 aa18.22■□□□□ 0.51
CENPA-206ENST00000475662 DUSP11O75319 330 aaKnown RBP18.22■□□□□ 0.51
CENPA-206ENST00000475662 EEF2P13639 858 aaKnown RBP18.22■□□□□ 0.51
CENPA-206ENST00000475662 RAB30Q15771 203 aa18.22■□□□□ 0.51
CENPA-206ENST00000475662 CCDC17Q96LX7 622 aa18.22■□□□□ 0.51
CENPA-206ENST00000475662 MSRAQ9UJ68 235 aa18.22■□□□□ 0.51
CENPA-206ENST00000475662 CHD9Q3L8U1 2897 aa18.22■□□□□ 0.51
CENPA-206ENST00000475662 NAV1Q8NEY1 1877 aa18.21■□□□□ 0.51
CENPA-206ENST00000475662 ARVCFO00192 962 aa18.21■□□□□ 0.51
CENPA-206ENST00000475662 ASGR1P07306 291 aa18.21■□□□□ 0.51
CENPA-206ENST00000475662 C6orf222P0C671 652 aaPredicted RBP18.21■□□□□ 0.51
CENPA-206ENST00000475662 FAM83BQ5T0W9 1011 aa18.21■□□□□ 0.51
CENPA-206ENST00000475662 MAMDC4Q6UXC1 1216 aa18.21■□□□□ 0.51
CENPA-206ENST00000475662 FAM126BQ8IXS8 530 aa18.21■□□□□ 0.51
CENPA-206ENST00000475662 PCSK9Q8NBP7 692 aaKnown RBP18.21■□□□□ 0.51
CENPA-206ENST00000475662 VTI1AQ96AJ9 217 aa18.21■□□□□ 0.51
CENPA-206ENST00000475662 NKX2-4Q9H2Z4 354 aa18.21■□□□□ 0.51
CENPA-206ENST00000475662 ARMT1Q9H993 441 aa18.21■□□□□ 0.51
CENPA-206ENST00000475662 CXXC1Q9P0U4 656 aaPredicted RBP18.21■□□□□ 0.51
CENPA-206ENST00000475662 A0A0U1RQG5 324 aaPredicted RBP18.2■□□□□ 0.5
CENPA-206ENST00000475662 APBB1O00213 710 aa18.2■□□□□ 0.5
CENPA-206ENST00000475662 ADCY6O43306 1168 aa18.2■□□□□ 0.5
CENPA-206ENST00000475662 PRKAB2O43741 272 aa18.2■□□□□ 0.5
CENPA-206ENST00000475662 CDK8P49336 464 aa18.2■□□□□ 0.5
CENPA-206ENST00000475662 HERVK_113Q902F9 699 aa18.2■□□□□ 0.5
CENPA-206ENST00000475662 DDX11Q96FC9 970 aa18.2■□□□□ 0.5
CENPA-206ENST00000475662 NECAB3Q96P71 396 aaPredicted RBP18.2■□□□□ 0.5
CENPA-206ENST00000475662 YBX2Q9Y2T7 364 aaKnown RBP18.2■□□□□ 0.5
CENPA-206ENST00000475662 DNAJC25-GNG10A0A024R161 153 aa18.19■□□□□ 0.5
CENPA-206ENST00000475662 CYP2D7A0A087X1C5 515 aa18.19■□□□□ 0.5
CENPA-206ENST00000475662 RAD21O60216 631 aa18.19■□□□□ 0.5
CENPA-206ENST00000475662 CYP2C18P33260 490 aa18.19■□□□□ 0.5
CENPA-206ENST00000475662 ACVR2BQ13705 512 aa18.19■□□□□ 0.5
CENPA-206ENST00000475662 ZKSCAN2Q63HK3 967 aa18.19■□□□□ 0.5
CENPA-206ENST00000475662 TEX13BQ9BXU2 312 aa18.19■□□□□ 0.5
CENPA-206ENST00000475662 UPF3AQ9H1J1 476 aaKnown RBP18.19■□□□□ 0.5
CENPA-206ENST00000475662 KANSL2Q9H9L4 492 aa18.19■□□□□ 0.5
CENPA-206ENST00000475662 SLC28A3Q9HAS3 691 aa18.19■□□□□ 0.5
CENPA-206ENST00000475662 GOPCQ9HD26 462 aa18.19■□□□□ 0.5
CENPA-206ENST00000475662 IL23AQ9NPF7 189 aa18.19■□□□□ 0.5
CENPA-206ENST00000475662 EXOC6BQ9Y2D4 811 aa18.19■□□□□ 0.5
CENPA-206ENST00000475662 RIPK3Q9Y572 518 aa18.19■□□□□ 0.5
CENPA-206ENST00000475662 GOLIM4O00461 696 aa18.18■□□□□ 0.5
CENPA-206ENST00000475662 TLR3O15455 904 aaKnown RBP18.18■□□□□ 0.5
CENPA-206ENST00000475662 GJA9P57773 515 aa18.18■□□□□ 0.5
CENPA-206ENST00000475662 GNASQ5JWF2 1037 aa18.18■□□□□ 0.5
CENPA-206ENST00000475662 C12orf60Q5U649 245 aa18.18■□□□□ 0.5
CENPA-206ENST00000475662 SNRNP48Q6IEG0 339 aaKnown RBP18.18■□□□□ 0.5
CENPA-206ENST00000475662 C16orf86Q6ZW13 317 aa18.18■□□□□ 0.5
CENPA-206ENST00000475662 ZNF467Q7Z7K2 595 aaPredicted RBP18.18■□□□□ 0.5
CENPA-206ENST00000475662 MTIF3Q9H2K0 278 aaKnown RBP18.18■□□□□ 0.5
CENPA-206ENST00000475662 SPC25Q9HBM1 224 aa18.18■□□□□ 0.5
CENPA-206ENST00000475662 ATP8A2Q9NTI2 1148 aa18.18■□□□□ 0.5
CENPA-206ENST00000475662 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.18■□□□□ 0.5
CENPA-206ENST00000475662 BDP1A6H8Y1 2624 aa18.18■□□□□ 0.5
CENPA-206ENST00000475662 CD4P01730 458 aa18.17■□□□□ 0.5
CENPA-206ENST00000475662 FGBP02675 491 aa18.17■□□□□ 0.5
CENPA-206ENST00000475662 BMP1P13497 986 aa18.17■□□□□ 0.5
CENPA-206ENST00000475662 HOXD11P31277 338 aaPredicted RBP18.17■□□□□ 0.5
CENPA-206ENST00000475662 CCDC144BQ3MJ40 725 aa18.17■□□□□ 0.5
CENPA-206ENST00000475662 ERC1Q8IUD2 1116 aa18.17■□□□□ 0.5
CENPA-206ENST00000475662 DNAJC2Q99543 621 aaKnown RBP18.17■□□□□ 0.5
CENPA-206ENST00000475662 SLF1Q9BQI6 1058 aa18.17■□□□□ 0.5
CENPA-206ENST00000475662 C1QTNF1Q9BXJ1 281 aa18.17■□□□□ 0.5
CENPA-206ENST00000475662 TSPYL2Q9H2G4 693 aaPredicted RBP18.17■□□□□ 0.5
CENPA-206ENST00000475662 IL1RAPL2Q9NP60 686 aa18.17■□□□□ 0.5
CENPA-206ENST00000475662 PARP14Q460N5 1801 aa18.16■□□□□ 0.5
CENPA-206ENST00000475662 USP17L12C9JPN9 530 aa18.16■□□□□ 0.5
CENPA-206ENST00000475662 USP17L21D6R901 530 aa18.16■□□□□ 0.5
CENPA-206ENST00000475662 CTAGE5O15320 804 aa18.16■□□□□ 0.5
CENPA-206ENST00000475662 MBD4O95243 580 aa18.16■□□□□ 0.5
CENPA-206ENST00000475662 SLFNL1Q499Z3 407 aa18.16■□□□□ 0.5
CENPA-206ENST00000475662 OTOP2Q7RTS6 562 aa18.16■□□□□ 0.5
CENPA-206ENST00000475662 NUP88Q99567 741 aaPredicted RBP18.16■□□□□ 0.5
CENPA-206ENST00000475662 ABHD16BQ9H3Z7 469 aa18.16■□□□□ 0.5
CENPA-206ENST00000475662 PLXNA1Q9UIW2 1896 aa18.16■□□□□ 0.5
CENPA-206ENST00000475662 ZNFX1Q9P2E3 1918 aaKnown RBP18.15■□□□□ 0.5
CENPA-206ENST00000475662 SLC4A3P48751 1232 aa18.15■□□□□ 0.5
CENPA-206ENST00000475662 RABGGTBP53611 331 aa18.15■□□□□ 0.5
CENPA-206ENST00000475662 TFF2Q03403 129 aa18.15■□□□□ 0.5
CENPA-206ENST00000475662 CEP85Q6P2H3 762 aa18.15■□□□□ 0.5
CENPA-206ENST00000475662 MICALL1Q8N3F8 863 aa18.15■□□□□ 0.5
CENPA-206ENST00000475662 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.15■□□□□ 0.5
CENPA-206ENST00000475662 FGD4Q96M96 766 aa18.15■□□□□ 0.5
CENPA-206ENST00000475662 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.15■□□□□ 0.5
CENPA-206ENST00000475662 HIPK3Q9H422 1215 aa18.15■□□□□ 0.5
CENPA-206ENST00000475662 NCOR1O75376 2440 aa18.15■□□□□ 0.5
CENPA-206ENST00000475662 UMODL1Q5DID0 1318 aa18.15■□□□□ 0.5
CENPA-206ENST00000475662 CHD7Q9P2D1 2997 aa18.15■□□□□ 0.5
CENPA-206ENST00000475662 ATP2A1O14983 1001 aa18.14■□□□□ 0.49
CENPA-206ENST00000475662 ARMCX2Q7L311 632 aa18.14■□□□□ 0.49
CENPA-206ENST00000475662 ITPRIPQ8IWB1 547 aa18.14■□□□□ 0.49
CENPA-206ENST00000475662 AMOTL1Q8IY63 956 aa18.14■□□□□ 0.49
CENPA-206ENST00000475662 CPXCR1Q8N123 301 aa18.14■□□□□ 0.49
CENPA-206ENST00000475662 SLC43A3Q8NBI5 491 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms