RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 USP17L6PQ6QN14 398 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 TMC4Q7Z404 712 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 WASF1Q92558 559 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 ANKRD31Q8N7Z5 1873 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 GAKO14976 1311 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 SMCO2A6NFE2 343 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 NFKBIEO00221 500 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 RSBN1LQ6PCB5 846 aaPredicted RBP13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 CASZ1Q86V15 1759 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 TEX2Q8IWB9 1127 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 NEDD1Q8NHV4 660 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 RTEL1Q9NZ71 1219 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 SCN9AQ15858 1988 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 CCDC66A2RUB6 948 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 MARCH6O60337 910 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 HOXA13P31271 388 aaPredicted RBP13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 C15orf52Q6ZUT6 534 aaKnown RBP13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 FCHSD1Q86WN1 690 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 CPXCR1Q8N123 301 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 CNNM3Q8NE01 707 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 RNF26Q9BY78 433 aaPredicted RBP13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 ZNF287Q9HBT7 754 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 BRMS1Q9HCU9 246 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 FBXO28Q9NVF7 368 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 TRMT1Q9NXH9 659 aaKnown RBP13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 ADAMTSL1Q8N6G6 1762 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 TRIM75PA6NK02 468 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 PEX10O60683 326 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 PRELPP51888 382 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 STX17P56962 302 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 ABCB5Q2M3G0 1257 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 SOGA3Q5TF21 947 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 MICALL2Q8IY33 904 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 FEZ1Q99689 392 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 PKD2L1Q9P0L9 805 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 SERTAD1Q9UHV2 236 aa13.01□□□□□ -0.33
KCNIP3-206ENST00000475491 TMEM232C9JQI7 657 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 PDHBP11177 359 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 GMPSP49915 693 aaPredicted RBP13□□□□□ -0.33
KCNIP3-206ENST00000475491 CIAPIN1Q6FI81 312 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 BRAPQ7Z569 592 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 TRMT44Q8IYL2 757 aaKnown RBP13□□□□□ -0.33
KCNIP3-206ENST00000475491 KIFC2Q96AC6 838 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 ZBTB9Q96C00 473 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 ZNF70Q9UC06 446 aaPredicted RBP13□□□□□ -0.33
KCNIP3-206ENST00000475491 PRR29P0C7W0 189 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 GOLGA8FQ08AF8 430 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 GOLGA8DPQ0D2H9 430 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 SLC39A14Q15043 492 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 TTC38Q5R3I4 469 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 C16orf45Q96MC5 204 aaPredicted RBP13□□□□□ -0.33
KCNIP3-206ENST00000475491 ZDHHC15Q96MV8 337 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 FHDC1Q9C0D6 1143 aaPredicted RBP13□□□□□ -0.33
KCNIP3-206ENST00000475491 MTFR1LQ9H019 292 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 ZNRF3Q9ULT6 936 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 WNT10BO00744 389 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 PRPF3O43395 683 aaKnown RBP13□□□□□ -0.33
KCNIP3-206ENST00000475491 CCNT1O60563 726 aaKnown RBP13□□□□□ -0.33
KCNIP3-206ENST00000475491 TOP1P11387 765 aaKnown RBP13□□□□□ -0.33
KCNIP3-206ENST00000475491 DGKHQ86XP1 1220 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 RTKN2Q8IZC4 609 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 UPF1Q92900 1129 aaKnown RBP eCLIP13□□□□□ -0.33
KCNIP3-206ENST00000475491 PI4KBQ9UBF8 816 aa13□□□□□ -0.33
KCNIP3-206ENST00000475491 COL24A1Q17RW2 1714 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 DDAH1O94760 285 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 RASA3Q14644 834 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 AXDND1Q5T1B0 1012 aaPredicted RBP12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 SLFN13Q68D06 897 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 CC2D2BQ6DHV5 1058 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 ADALQ6DHV7 355 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 KCNG4Q8TDN1 519 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 RRP36Q96EU6 259 aaKnown RBP12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 RBM28Q9NW13 759 aaKnown RBP12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 KCNH3Q9ULD8 1083 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 WDR19Q8NEZ3 1342 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 A0A1W2PRG0 241 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 SORBS3O60504 671 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 TTLL1O95922 423 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 KCNA4P22459 653 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 RAD51AP2Q09MP3 1159 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 GPIHBP1Q8IV16 184 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 ADGRF4Q8IZF3 695 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 BLIDQ8IZY5 108 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 TMEM60Q9H2L4 133 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 HDAC9Q9UKV0 1011 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 BRCA2P51587 3418 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 SPDYE2BA6NHP3 402 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 CALM1P0DP23 149 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 CALM2P0DP24 149 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 CALM3P0DP25 149 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 HHIPL2Q6UWX4 724 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 PDCL2Q8N4E4 241 aa12.99□□□□□ -0.33
KCNIP3-206ENST00000475491 ERICH4A6NGS2 130 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 CEP57L1Q8IYX8 460 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 KRI1Q8N9T8 703 aaKnown RBP12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 DDNO94850 711 aaPredicted RBP12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 SSBP05455 408 aaKnown RBP eCLIP12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 ATP1A3P13637 1013 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 TXKP42681 527 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms