RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 KCNH6Q9H252 994 aa17.11■□□□□ 0.33
ATG9A-220ENST00000475339 COPRSQ9NQ92 184 aa17.11■□□□□ 0.33
ATG9A-220ENST00000475339 FAM184BQ9ULE4 1060 aa17.11■□□□□ 0.33
ATG9A-220ENST00000475339 CDK5RAP2Q96SN8 1893 aa17.11■□□□□ 0.33
ATG9A-220ENST00000475339 A0A1W2PRG0 241 aa17.1■□□□□ 0.33
ATG9A-220ENST00000475339 GNAI2P04899 355 aa17.1■□□□□ 0.33
ATG9A-220ENST00000475339 ALADP13716 330 aa17.1■□□□□ 0.33
ATG9A-220ENST00000475339 CST5P28325 142 aaPredicted RBP17.1■□□□□ 0.33
ATG9A-220ENST00000475339 SSTR3P32745 418 aaPredicted RBP17.1■□□□□ 0.33
ATG9A-220ENST00000475339 DSG3P32926 999 aa17.1■□□□□ 0.33
ATG9A-220ENST00000475339 GUCY1A2P33402 732 aa17.1■□□□□ 0.33
ATG9A-220ENST00000475339 MCAMP43121 646 aa17.1■□□□□ 0.33
ATG9A-220ENST00000475339 KIAA1755Q5JYT7 1200 aa17.1■□□□□ 0.33
ATG9A-220ENST00000475339 SAMD1Q6SPF0 538 aaPredicted RBP17.1■□□□□ 0.33
ATG9A-220ENST00000475339 FAM178BQ8IXR5 827 aa17.1■□□□□ 0.33
ATG9A-220ENST00000475339 PCSK9Q8NBP7 692 aaKnown RBP17.1■□□□□ 0.33
ATG9A-220ENST00000475339 ANKS1AQ92625 1134 aa17.1■□□□□ 0.33
ATG9A-220ENST00000475339 CABP5Q9NP86 173 aa17.1■□□□□ 0.33
ATG9A-220ENST00000475339 SERPINB13Q9UIV8 391 aa17.1■□□□□ 0.33
ATG9A-220ENST00000475339 AKAP2Q9Y2D5 859 aa17.1■□□□□ 0.33
ATG9A-220ENST00000475339 DIS3Q9Y2L1 958 aaKnown RBP17.1■□□□□ 0.33
ATG9A-220ENST00000475339 DUSP11O75319 330 aaKnown RBP17.09■□□□□ 0.33
ATG9A-220ENST00000475339 FLOT1O75955 427 aa17.09■□□□□ 0.33
ATG9A-220ENST00000475339 DYNLL1P63167 89 aaKnown RBP17.09■□□□□ 0.33
ATG9A-220ENST00000475339 KCTD2Q14681 263 aa17.09■□□□□ 0.33
ATG9A-220ENST00000475339 TMEM132BQ14DG7 1078 aa17.09■□□□□ 0.33
ATG9A-220ENST00000475339 SEPT2Q15019 361 aa17.09■□□□□ 0.33
ATG9A-220ENST00000475339 GORABQ5T7V8 394 aa17.09■□□□□ 0.33
ATG9A-220ENST00000475339 VWCEQ96DN2 955 aa17.09■□□□□ 0.33
ATG9A-220ENST00000475339 A0A0G2JMZ2 1700 aa17.09■□□□□ 0.33
ATG9A-220ENST00000475339 ZNF318Q5VUA4 2279 aa17.08■□□□□ 0.33
ATG9A-220ENST00000475339 ARHGEF15O94989 841 aa17.08■□□□□ 0.32
ATG9A-220ENST00000475339 SLC25A27O95847 323 aa17.08■□□□□ 0.32
ATG9A-220ENST00000475339 RLBP1P12271 317 aa17.08■□□□□ 0.32
ATG9A-220ENST00000475339 ARID4AP29374 1257 aaPredicted RBP17.08■□□□□ 0.32
ATG9A-220ENST00000475339 GRB10Q13322 594 aa17.08■□□□□ 0.32
ATG9A-220ENST00000475339 WNT8AQ9H1J5 351 aa17.08■□□□□ 0.32
ATG9A-220ENST00000475339 ZHX1Q9UKY1 873 aaPredicted RBP17.08■□□□□ 0.32
ATG9A-220ENST00000475339 USP34Q70CQ2 3546 aa17.07■□□□□ 0.32
ATG9A-220ENST00000475339 ADCY6O43306 1168 aa17.07■□□□□ 0.32
ATG9A-220ENST00000475339 LPXNO60711 386 aa17.07■□□□□ 0.32
ATG9A-220ENST00000475339 SNAI1O95863 264 aaPredicted RBP17.07■□□□□ 0.32
ATG9A-220ENST00000475339 SHMT1P34896 483 aa17.07■□□□□ 0.32
ATG9A-220ENST00000475339 TAP1Q03518 808 aa17.07■□□□□ 0.32
ATG9A-220ENST00000475339 TTLL4Q14679 1199 aa17.07■□□□□ 0.32
ATG9A-220ENST00000475339 GNASQ5JWF2 1037 aa17.07■□□□□ 0.32
ATG9A-220ENST00000475339 RPUSD2Q8IZ73 545 aaKnown RBP17.07■□□□□ 0.32
ATG9A-220ENST00000475339 PANK1Q8TE04 598 aa17.07■□□□□ 0.32
ATG9A-220ENST00000475339 NOC4LQ9BVI4 516 aaKnown RBP17.07■□□□□ 0.32
ATG9A-220ENST00000475339 EHD4Q9H223 541 aa17.07■□□□□ 0.32
ATG9A-220ENST00000475339 SNRKQ9NRH2 765 aa17.07■□□□□ 0.32
ATG9A-220ENST00000475339 FOCADQ5VW36 1801 aa17.07■□□□□ 0.32
ATG9A-220ENST00000475339 CFAP54Q96N23 3096 aa17.06■□□□□ 0.32
ATG9A-220ENST00000475339 SRGAP3O43295 1099 aa17.06■□□□□ 0.32
ATG9A-220ENST00000475339 ST18O60284 1047 aa17.05■□□□□ 0.32
ATG9A-220ENST00000475339 SPRED2Q7Z698 418 aa17.05■□□□□ 0.32
ATG9A-220ENST00000475339 SPICE1Q8N0Z3 855 aa17.05■□□□□ 0.32
ATG9A-220ENST00000475339 SCLYQ96I15 445 aa17.05■□□□□ 0.32
ATG9A-220ENST00000475339 SPC25Q9HBM1 224 aa17.05■□□□□ 0.32
ATG9A-220ENST00000475339 DCXO43602 365 aa17.04■□□□□ 0.32
ATG9A-220ENST00000475339 IL9P15248 144 aa17.04■□□□□ 0.32
ATG9A-220ENST00000475339 USP5P45974 858 aa17.04■□□□□ 0.32
ATG9A-220ENST00000475339 GJA9P57773 515 aa17.04■□□□□ 0.32
ATG9A-220ENST00000475339 RIOX2Q8IUF8 465 aa17.04■□□□□ 0.32
ATG9A-220ENST00000475339 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.04■□□□□ 0.32
ATG9A-220ENST00000475339 TRPV6Q9H1D0 765 aa17.04■□□□□ 0.32
ATG9A-220ENST00000475339 UPF3AQ9H1J1 476 aaKnown RBP17.04■□□□□ 0.32
ATG9A-220ENST00000475339 UBE2ZQ9H832 354 aaPredicted RBP17.04■□□□□ 0.32
ATG9A-220ENST00000475339 MPHOSPH10O00566 681 aaKnown RBP17.03■□□□□ 0.32
ATG9A-220ENST00000475339 CTAGE5O15320 804 aa17.03■□□□□ 0.32
ATG9A-220ENST00000475339 PLCD1P51178 756 aa17.03■□□□□ 0.32
ATG9A-220ENST00000475339 MTX1Q13505 466 aa17.03■□□□□ 0.32
ATG9A-220ENST00000475339 LEXMQ3ZCV2 418 aa17.03■□□□□ 0.32
ATG9A-220ENST00000475339 CXCL17Q6UXB2 119 aa17.03■□□□□ 0.32
ATG9A-220ENST00000475339 HFE2Q6ZVN8 426 aa17.03■□□□□ 0.32
ATG9A-220ENST00000475339 TTC6Q86TZ1 520 aa17.03■□□□□ 0.32
ATG9A-220ENST00000475339 MSL3Q8N5Y2 521 aaKnown RBP17.03■□□□□ 0.32
ATG9A-220ENST00000475339 SLC43A3Q8NBI5 491 aa17.03■□□□□ 0.32
ATG9A-220ENST00000475339 C1orf115Q9H7X2 142 aa17.03■□□□□ 0.32
ATG9A-220ENST00000475339 MYH1P12882 1939 aa17.02■□□□□ 0.32
ATG9A-220ENST00000475339 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.02■□□□□ 0.32
ATG9A-220ENST00000475339 POTEB3A0JP26 581 aa17.02■□□□□ 0.32
ATG9A-220ENST00000475339 UQCRFS1P1P0C7P4 283 aa17.02■□□□□ 0.32
ATG9A-220ENST00000475339 KCNA5P22460 613 aa17.02■□□□□ 0.32
ATG9A-220ENST00000475339 STAT3P40763 770 aa17.02■□□□□ 0.32
ATG9A-220ENST00000475339 BEX3Q00994 111 aa17.02■□□□□ 0.32
ATG9A-220ENST00000475339 FOXK2Q01167 660 aa17.02■□□□□ 0.32
ATG9A-220ENST00000475339 ACVR2BQ13705 512 aa17.02■□□□□ 0.32
ATG9A-220ENST00000475339 CCDC144BQ3MJ40 725 aa17.02■□□□□ 0.32
ATG9A-220ENST00000475339 POTEBQ6S5H4 581 aa17.02■□□□□ 0.32
ATG9A-220ENST00000475339 MAMDC4Q6UXC1 1216 aa17.02■□□□□ 0.32
ATG9A-220ENST00000475339 MIGA1Q8NAN2 632 aa17.02■□□□□ 0.32
ATG9A-220ENST00000475339 AGBL1Q96MI9 1066 aa17.02■□□□□ 0.32
ATG9A-220ENST00000475339 CHMP4BQ9H444 224 aaKnown RBP17.02■□□□□ 0.32
ATG9A-220ENST00000475339 DDX19BQ9UMR2 479 aa17.02■□□□□ 0.32
ATG9A-220ENST00000475339 GRIN2DO15399 1336 aa17.01■□□□□ 0.31
ATG9A-220ENST00000475339 B4GALT4O60513 344 aa17.01■□□□□ 0.31
ATG9A-220ENST00000475339 CYP7A1P22680 504 aa17.01■□□□□ 0.31
ATG9A-220ENST00000475339 DEFB128Q7Z7B8 93 aa17.01■□□□□ 0.31
ATG9A-220ENST00000475339 FBXO28Q9NVF7 368 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms