RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 CYTH3O43739 400 aa11.72□□□□□ -0.53
PCCB-213ENST00000475214 TBC1D12O60347 775 aa11.72□□□□□ -0.53
PCCB-213ENST00000475214 EEF2P13639 858 aaKnown RBP11.72□□□□□ -0.53
PCCB-213ENST00000475214 ICA1Q05084 483 aa11.72□□□□□ -0.53
PCCB-213ENST00000475214 ZNF543Q08ER8 600 aa11.72□□□□□ -0.53
PCCB-213ENST00000475214 TNFAIP1Q13829 316 aa11.72□□□□□ -0.53
PCCB-213ENST00000475214 SEPT2Q15019 361 aa11.72□□□□□ -0.53
PCCB-213ENST00000475214 HEATR3Q7Z4Q2 680 aa11.72□□□□□ -0.53
PCCB-213ENST00000475214 GAS2L3Q86XJ1 694 aa11.72□□□□□ -0.53
PCCB-213ENST00000475214 CLEC10AQ8IUN9 316 aa11.72□□□□□ -0.53
PCCB-213ENST00000475214 MICALL2Q8IY33 904 aa11.72□□□□□ -0.53
PCCB-213ENST00000475214 ZNF713Q8N859 430 aaPredicted RBP11.72□□□□□ -0.53
PCCB-213ENST00000475214 DCAF4Q8WV16 495 aa11.72□□□□□ -0.53
PCCB-213ENST00000475214 MRPS27Q92552 414 aaKnown RBP11.72□□□□□ -0.53
PCCB-213ENST00000475214 RIOX1Q9H6W3 641 aa11.72□□□□□ -0.53
PCCB-213ENST00000475214 GRPEL1Q9HAV7 217 aa11.72□□□□□ -0.53
PCCB-213ENST00000475214 DACT1Q9NYF0 836 aa11.72□□□□□ -0.53
PCCB-213ENST00000475214 THSD7BQ9C0I4 1608 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 FRMPD2Q68DX3 1309 aaPredicted RBP11.71□□□□□ -0.53
PCCB-213ENST00000475214 GDF11O95390 407 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 SLURP2P0DP57 97 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 HSPA8P11142 646 aaKnown RBP11.71□□□□□ -0.53
PCCB-213ENST00000475214 PTPAQ15257 358 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 CCDC96Q2M329 555 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 NBPF9Q3BBW0 867 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 PAXIP1Q6ZW49 1069 aaPredicted RBP11.71□□□□□ -0.53
PCCB-213ENST00000475214 BLIDQ8IZY5 108 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 FSIP1Q8NA03 581 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 GPKOWQ92917 476 aaPredicted RBP eCLIP11.71□□□□□ -0.531e-9■■■■□ 25.5
PCCB-213ENST00000475214 SHISA4Q96DD7 197 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 BEGAINQ9BUH8 593 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 TNMDQ9H2S6 317 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 TSPY26PQ9H489 355 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 VAT1LQ9HCJ6 419 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 GPCPD1Q9NPB8 672 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.71□□□□□ -0.53
PCCB-213ENST00000475214 BARHL2Q9NY43 387 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 SYNPO2Q9UMS6 1093 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 PCDHA4Q9UN74 947 aa11.71□□□□□ -0.53
PCCB-213ENST00000475214 TRIM75PA6NK02 468 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 STXBP3O00186 592 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 CTAGE5O15320 804 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 CUTAO60888 179 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 NR1I2O75469 434 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 BMP15O95972 392 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 GH2P01242 217 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 GNA11P29992 359 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 TRAPPC10P48553 1259 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 TOB1P50616 345 aaPredicted RBP11.7□□□□□ -0.54
PCCB-213ENST00000475214 NAPAP54920 295 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 FAM160A1Q05DH4 1040 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 MAP3K11Q16584 847 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 SLC35G1Q2M3R5 365 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 SLFN13Q68D06 897 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 WWC2Q6AWC2 1192 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 HOMER1Q86YM7 354 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 DAGLBQ8NCG7 672 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 TNFRSF25Q93038 417 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 HHIPL1Q96JK4 782 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 PIGSQ96S52 555 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 TMEM39BQ9GZU3 492 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 UBA5Q9GZZ9 404 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 CLSTN2Q9H4D0 955 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 ARHGEF10LQ9HCE6 1279 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 C6orf50Q9HD87 102 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 TLL2Q9Y6L7 1015 aa11.7□□□□□ -0.54
PCCB-213ENST00000475214 BAZ2BQ9UIF8 2168 aaKnown RBP11.69□□□□□ -0.54
PCCB-213ENST00000475214 PNMA6FA0A0J9YX94 578 aa11.69□□□□□ -0.54
PCCB-213ENST00000475214 SHTN1A0MZ66 631 aa11.69□□□□□ -0.54
PCCB-213ENST00000475214 RAD21O60216 631 aa11.69□□□□□ -0.54
PCCB-213ENST00000475214 KINO60870 393 aaKnown RBP11.69□□□□□ -0.54
PCCB-213ENST00000475214 CELF2O95319 508 aaKnown RBP11.69□□□□□ -0.54
PCCB-213ENST00000475214 ATP2B1P20020 1258 aa11.69□□□□□ -0.54
PCCB-213ENST00000475214 CMA1P23946 247 aa11.69□□□□□ -0.54
PCCB-213ENST00000475214 MARCKSP29966 332 aaPredicted RBP11.69□□□□□ -0.54
PCCB-213ENST00000475214 SLC1A4P43007 532 aa11.69□□□□□ -0.54
PCCB-213ENST00000475214 RASA3Q14644 834 aa11.69□□□□□ -0.54
PCCB-213ENST00000475214 NPY5RQ15761 445 aa11.69□□□□□ -0.54
PCCB-213ENST00000475214 KIF4BQ2VIQ3 1234 aa11.69□□□□□ -0.54
PCCB-213ENST00000475214 RASGRP2Q7LDG7 609 aa11.69□□□□□ -0.54
PCCB-213ENST00000475214 KRI1Q8N9T8 703 aaKnown RBP11.69□□□□□ -0.54
PCCB-213ENST00000475214 GMCL1P1Q8NEA9 526 aa11.69□□□□□ -0.54
PCCB-213ENST00000475214 DCPSQ96C86 337 aaKnown RBP11.69□□□□□ -0.54
PCCB-213ENST00000475214 CPVLQ9H3G5 476 aa11.69□□□□□ -0.54
PCCB-213ENST00000475214 MORC2Q9Y6X9 1032 aaPredicted RBP11.69□□□□□ -0.54
PCCB-213ENST00000475214 CCDC194A0A1B0GVG4 234 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 SMCO2A6NFE2 343 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 F5H6K3 240 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 TRAF5O00463 557 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 MAP2K2P36507 400 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 MAP3K10Q02779 954 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 KLRC3Q07444 240 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 CAMK4Q16566 473 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 TBC1D10BQ4KMP7 808 aaPredicted RBP11.68□□□□□ -0.54
PCCB-213ENST00000475214 TTC38Q5R3I4 469 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 AXDND1Q5T1B0 1012 aaPredicted RBP11.68□□□□□ -0.54
PCCB-213ENST00000475214 CST9Q5W186 159 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 PIK3AP1Q6ZUJ8 805 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 SAMD7Q7Z3H4 446 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 SIAH1Q8IUQ4 282 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms