RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 SMCHD1A6NHR9 2005 aa19.04■□□□□ 0.64
SRM-204ENST00000475189 ZBED4O75132 1171 aa19.04■□□□□ 0.64
SRM-204ENST00000475189 PTPREP23469 700 aa19.04■□□□□ 0.64
SRM-204ENST00000475189 STAT3P40763 770 aa19.04■□□□□ 0.64
SRM-204ENST00000475189 ANTXR2P58335 489 aa19.04■□□□□ 0.64
SRM-204ENST00000475189 IKQ13123 557 aaPredicted RBP19.04■□□□□ 0.64
SRM-204ENST00000475189 CCDC96Q2M329 555 aa19.04■□□□□ 0.64
SRM-204ENST00000475189 TTBK2Q6IQ55 1244 aa19.04■□□□□ 0.64
SRM-204ENST00000475189 NBPF11Q86T75 865 aa19.04■□□□□ 0.64
SRM-204ENST00000475189 RIOX2Q8IUF8 465 aa19.04■□□□□ 0.64
SRM-204ENST00000475189 ZNF333Q96JL9 665 aa19.04■□□□□ 0.64
SRM-204ENST00000475189 FRMPD2Q68DX3 1309 aaPredicted RBP19.03■□□□□ 0.64
SRM-204ENST00000475189 KIAA0100Q14667 2235 aaKnown RBP19.03■□□□□ 0.64
SRM-204ENST00000475189 SLC15A5A6NIM6 579 aa19.03■□□□□ 0.64
SRM-204ENST00000475189 ATP2A1O14983 1001 aa19.03■□□□□ 0.64
SRM-204ENST00000475189 SLC25A27O95847 323 aa19.03■□□□□ 0.64
SRM-204ENST00000475189 FDX1P10109 184 aa19.03■□□□□ 0.64
SRM-204ENST00000475189 ELNP15502 786 aa19.03■□□□□ 0.64
SRM-204ENST00000475189 COL9A3Q14050 684 aaPredicted RBP19.03■□□□□ 0.64
SRM-204ENST00000475189 IFIT1BQ5T764 474 aaKnown RBP19.03■□□□□ 0.64
SRM-204ENST00000475189 RNF20Q5VTR2 975 aa19.03■□□□□ 0.64
SRM-204ENST00000475189 BTNL9Q6UXG8 535 aa19.03■□□□□ 0.64
SRM-204ENST00000475189 CHST3Q7LGC8 479 aa19.03■□□□□ 0.64
SRM-204ENST00000475189 NCAPG2Q86XI2 1143 aa19.03■□□□□ 0.64
SRM-204ENST00000475189 SLAIN1Q8ND83 568 aa19.03■□□□□ 0.64
SRM-204ENST00000475189 PXYLP1Q8TE99 480 aa19.03■□□□□ 0.64
SRM-204ENST00000475189 SOCS4Q8WXH5 440 aa19.03■□□□□ 0.64
SRM-204ENST00000475189 MROH8Q9H579 483 aa19.03■□□□□ 0.64
SRM-204ENST00000475189 GPCPD1Q9NPB8 672 aa19.03■□□□□ 0.64
SRM-204ENST00000475189 PRR12Q9ULL5 1215 aa19.03■□□□□ 0.64
SRM-204ENST00000475189 ZNF236Q9UL36 1845 aa19.02■□□□□ 0.64
SRM-204ENST00000475189 IFIT3O14879 490 aaKnown RBP19.02■□□□□ 0.64
SRM-204ENST00000475189 CYP2B6P20813 491 aa19.02■□□□□ 0.64
SRM-204ENST00000475189 ZNF543Q08ER8 600 aa19.02■□□□□ 0.64
SRM-204ENST00000475189 MAP2K5Q13163 448 aa19.02■□□□□ 0.64
SRM-204ENST00000475189 GRB14Q14449 540 aa19.02■□□□□ 0.64
SRM-204ENST00000475189 TEX13BQ9BXU2 312 aa19.02■□□□□ 0.64
SRM-204ENST00000475189 RAVER2Q9HCJ3 691 aaKnown RBP19.02■□□□□ 0.64
SRM-204ENST00000475189 CTDP1Q9Y5B0 961 aaPredicted RBP19.02■□□□□ 0.64
SRM-204ENST00000475189 IVNS1ABPQ9Y6Y0 642 aa19.02■□□□□ 0.64
SRM-204ENST00000475189 STRNO43815 780 aa19.01■□□□□ 0.63
SRM-204ENST00000475189 XRCC5P13010 732 aaKnown RBP19.01■□□□□ 0.63
SRM-204ENST00000475189 SLC16A2P36021 539 aa19.01■□□□□ 0.63
SRM-204ENST00000475189 TSGA10IPQ3SY00 556 aa19.01■□□□□ 0.63
SRM-204ENST00000475189 SNRNP48Q6IEG0 339 aaKnown RBP19.01■□□□□ 0.63
SRM-204ENST00000475189 RASEFQ8IZ41 740 aa19.01■□□□□ 0.63
SRM-204ENST00000475189 CPXCR1Q8N123 301 aa19.01■□□□□ 0.63
SRM-204ENST00000475189 IGDCC4Q8TDY8 1250 aa19.01■□□□□ 0.63
SRM-204ENST00000475189 SENP2Q9HC62 589 aa19.01■□□□□ 0.63
SRM-204ENST00000475189 CENPFP49454 3210 aa19■□□□□ 0.63
SRM-204ENST00000475189 ERICH2A1L162 156 aa19■□□□□ 0.63
SRM-204ENST00000475189 REC8O95072 547 aa19■□□□□ 0.63
SRM-204ENST00000475189 COPB2P35606 906 aa19■□□□□ 0.63
SRM-204ENST00000475189 RGS2P41220 211 aa19■□□□□ 0.63
SRM-204ENST00000475189 OAZ1P54368 228 aa19■□□□□ 0.63
SRM-204ENST00000475189 SNAP25P60880 206 aa19■□□□□ 0.63
SRM-204ENST00000475189 WTAPQ15007 396 aa19■□□□□ 0.63
SRM-204ENST00000475189 SART3Q15020 963 aaKnown RBP19■□□□□ 0.63
SRM-204ENST00000475189 GPATCH4Q5T3I0 446 aaKnown RBP19■□□□□ 0.63
SRM-204ENST00000475189 SYDE2Q5VT97 1194 aa19■□□□□ 0.63
SRM-204ENST00000475189 KCNB2Q92953 911 aa19■□□□□ 0.63
SRM-204ENST00000475189 MTA3Q9BTC8 594 aa19■□□□□ 0.63
SRM-204ENST00000475189 BIN2Q9UBW5 565 aaPredicted RBP19■□□□□ 0.63
SRM-204ENST00000475189 RIPK3Q9Y572 518 aa19■□□□□ 0.63
SRM-204ENST00000475189 RBBP6Q7Z6E9 1792 aaKnown RBP19■□□□□ 0.63
SRM-204ENST00000475189 PLXNA1Q9UIW2 1896 aa19■□□□□ 0.63
SRM-204ENST00000475189 ZNF536O15090 1300 aa19■□□□□ 0.63
SRM-204ENST00000475189 PRC1O43663 620 aa18.99■□□□□ 0.63
SRM-204ENST00000475189 GOLGA8HP0CJ92 632 aa18.99■□□□□ 0.63
SRM-204ENST00000475189 ADORA2AP29274 412 aa18.99■□□□□ 0.63
SRM-204ENST00000475189 MCM5P33992 734 aa18.99■□□□□ 0.63
SRM-204ENST00000475189 RGS19P49795 217 aa18.99■□□□□ 0.63
SRM-204ENST00000475189 TMEM67Q5HYA8 995 aa18.99■□□□□ 0.63
SRM-204ENST00000475189 ABRAQ8N0Z2 381 aa18.99■□□□□ 0.63
SRM-204ENST00000475189 APBA2Q99767 749 aa18.99■□□□□ 0.63
SRM-204ENST00000475189 MYH6P13533 1939 aa18.99■□□□□ 0.63
SRM-204ENST00000475189 HOXC6P09630 235 aa18.98■□□□□ 0.63
SRM-204ENST00000475189 FCER1AP12319 257 aa18.98■□□□□ 0.63
SRM-204ENST00000475189 ZKSCAN1P17029 563 aaPredicted RBP18.98■□□□□ 0.63
SRM-204ENST00000475189 HSPA4P34932 840 aa18.98■□□□□ 0.63
SRM-204ENST00000475189 SLC4A3P48751 1232 aa18.98■□□□□ 0.63
SRM-204ENST00000475189 SOX10P56693 466 aa18.98■□□□□ 0.63
SRM-204ENST00000475189 UBXN2AP68543 259 aa18.98■□□□□ 0.63
SRM-204ENST00000475189 MTFR1Q15390 333 aa18.98■□□□□ 0.63
SRM-204ENST00000475189 ADCK5Q3MIX3 580 aa18.98■□□□□ 0.63
SRM-204ENST00000475189 NPLOC4Q8TAT6 608 aa18.98■□□□□ 0.63
SRM-204ENST00000475189 TRIB2Q92519 343 aa18.98■□□□□ 0.63
SRM-204ENST00000475189 AGBL1Q96MI9 1066 aa18.98■□□□□ 0.63
SRM-204ENST00000475189 RANBP17Q9H2T7 1088 aaKnown RBP18.98■□□□□ 0.63
SRM-204ENST00000475189 GPHNQ9NQX3 736 aaPredicted RBP18.98■□□□□ 0.63
SRM-204ENST00000475189 COBLO75128 1261 aa18.97■□□□□ 0.63
SRM-204ENST00000475189 MYCP01106 439 aaPredicted RBP18.97■□□□□ 0.63
SRM-204ENST00000475189 HMGCRP04035 888 aa18.97■□□□□ 0.63
SRM-204ENST00000475189 INHAP05111 366 aa18.97■□□□□ 0.63
SRM-204ENST00000475189 TRIM32Q13049 653 aa18.97■□□□□ 0.63
SRM-204ENST00000475189 CCL14Q16627 93 aa18.97■□□□□ 0.63
SRM-204ENST00000475189 ASPRV1Q53RT3 343 aa18.97■□□□□ 0.63
SRM-204ENST00000475189 CCDC174Q6PII3 467 aa18.97■□□□□ 0.63
SRM-204ENST00000475189 TRMT44Q8IYL2 757 aaKnown RBP18.97■□□□□ 0.63
SRM-204ENST00000475189 TMEM87BQ96K49 555 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms