RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 RPL6Q02878 288 aaKnown RBP1.76□□□□□ -2.13
HDAC9-222ENST00000474742 LMNB2Q03252 620 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 EFEMP1Q12805 493 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 GAB4Q2WGN9 574 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 ZNF394Q53GI3 561 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 NT5DC1Q5TFE4 455 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 FERMT3Q86UX7 667 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 METTL16Q86W50 562 aaKnown RBP1.76□□□□□ -2.13
HDAC9-222ENST00000474742 DTWD2Q8NBA8 298 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 SLC16A11Q8NCK7 471 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 FAM13CQ8NE31 585 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 GATAD2BQ8WXI9 593 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 EAF1Q96JC9 268 aaPredicted RBP1.76□□□□□ -2.13
HDAC9-222ENST00000474742 Q96M66 194 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 GPR62Q9BZJ7 368 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 CNTD2Q9H8S5 307 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 CRTAC1Q9NQ79 661 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 CEP131Q9UPN4 1083 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 FAN1Q9Y2M0 1017 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 TAF6LQ9Y6J9 622 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 CHURC1-FNTBB4DL54 471 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 TLR3O15455 904 aaKnown RBP1.75□□□□□ -2.13
HDAC9-222ENST00000474742 PRICKLE3O43900 615 aaPredicted RBP1.75□□□□□ -2.13
HDAC9-222ENST00000474742 BUB1BO60566 1050 aaPredicted RBP1.75□□□□□ -2.13
HDAC9-222ENST00000474742 LRRN2O75325 713 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 BPNT1O95861 308 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 PNLIPP16233 465 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 PLCG1P19174 1290 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 LIMS1P48059 325 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 CDR1P51861 262 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 PCBP3P57721 371 aaKnown RBP1.75□□□□□ -2.13
HDAC9-222ENST00000474742 TSNAXIP1Q2TAA8 658 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 ZNF326Q5BKZ1 582 aaKnown RBP1.75□□□□□ -2.13
HDAC9-222ENST00000474742 RNF111Q6ZNA4 994 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 FAM196AQ6ZSG2 479 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 USP51Q70EK9 711 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 REC114Q7Z4M0 266 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 NLRX1Q86UT6 975 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 CCDC84Q86UT8 332 aaPredicted RBP1.75□□□□□ -2.13
HDAC9-222ENST00000474742 LDHDQ86WU2 507 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 LSRQ86X29 649 aaPredicted RBP1.75□□□□□ -2.13
HDAC9-222ENST00000474742 FAM129CQ86XR2 697 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 MCATQ8IVS2 390 aaKnown RBP1.75□□□□□ -2.13
HDAC9-222ENST00000474742 MRPL41Q8IXM3 137 aaKnown RBP1.75□□□□□ -2.13
HDAC9-222ENST00000474742 GOLM1Q8NBJ4 401 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 TMEM87AQ8NBN3 555 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 CHST13Q8NET6 341 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 DNAJB8Q8NHS0 232 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 ZNF296Q8WUU4 475 aaPredicted RBP1.75□□□□□ -2.13
HDAC9-222ENST00000474742 MRIQ9BWK5 157 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 MIR1-1HGQ9H1L0 117 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 ANTXR1Q9H6X2 564 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 SP110Q9HB58 689 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 MRS2Q9HD23 443 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 SMPD4Q9NXE4 827 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 UBP1Q9NZI7 540 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 GGT7Q9UJ14 662 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 PCDHGB7Q9Y5F8 929 aa1.75□□□□□ -2.13
HDAC9-222ENST00000474742 WTIPA6NIX2 430 aaPredicted RBP1.74□□□□□ -2.13
HDAC9-222ENST00000474742 NRDCO43847 1150 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 ATE1O95260 518 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 HTR3BO95264 441 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 VAMP1P23763 118 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 POLR2BP30876 1174 aaKnown RBP1.74□□□□□ -2.13
HDAC9-222ENST00000474742 CNR2P34972 360 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 EIF4A3P38919 411 aaKnown RBP1.74□□□□□ -2.13
HDAC9-222ENST00000474742 MAGEA10P43363 369 aaPredicted RBP1.74□□□□□ -2.13
HDAC9-222ENST00000474742 KIR2DL1P43626 348 aaPredicted RBP1.74□□□□□ -2.13
HDAC9-222ENST00000474742 KIR2DL2P43627 348 aaPredicted RBP1.74□□□□□ -2.13
HDAC9-222ENST00000474742 SLURP1P55000 103 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 GJA9P57773 515 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 RTP1P59025 263 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 CYP4F8P98187 520 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 HDLBPQ00341 1268 aaKnown RBP1.74□□□□□ -2.13
HDAC9-222ENST00000474742 TEKQ02763 1124 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 CLCQ05315 142 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 RAD51AP2Q09MP3 1159 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 LAPTM5Q13571 262 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 TARBP2Q15633 366 aaKnown RBP1.74□□□□□ -2.13
HDAC9-222ENST00000474742 TMEM201Q5SNT2 666 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 C9orf131Q5VYM1 1079 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 GALNT18Q6P9A2 607 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 RELL1Q8IUW5 271 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 TMEFF1Q8IYR6 380 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 PHACTR4Q8IZ21 702 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 CYB5D2Q8WUJ1 264 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 RNF141Q8WVD5 230 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 LINC01599Q8WXQ3 324 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 DDX1Q92499 740 aaKnown RBP1.74□□□□□ -2.13
HDAC9-222ENST00000474742 SHISA4Q96DD7 197 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 VWCEQ96DN2 955 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 MRRFQ96E11 262 aaKnown RBP1.74□□□□□ -2.13
HDAC9-222ENST00000474742 LOXL4Q96JB6 756 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 SORCS2Q96PQ0 1159 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 SPATA25Q9BR10 227 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 LRRC3Q9BY71 257 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 FOXP3Q9BZS1 431 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 BRMS1Q9HCU9 246 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 REV1Q9UBZ9 1251 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 SUSD2Q9UGT4 822 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms