RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 USP17L2Q6R6M4 530 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 GADL1Q6ZQY3 521 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 FASTKD5Q7L8L6 764 aaKnown RBP8.22□□□□□ -1.09
LIMD1-204ENST00000474665 ANKRD23Q86SG2 305 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 DGKHQ86XP1 1220 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 PROCA1Q8NCQ7 364 aaPredicted RBP8.22□□□□□ -1.09
LIMD1-204ENST00000474665 CHMP4CQ96CF2 233 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 JAKMIP1Q96N16 626 aaKnown RBP8.22□□□□□ -1.09
LIMD1-204ENST00000474665 TTC14Q96N46 770 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 NEK1Q96PY6 1258 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 TTYH1Q9H313 450 aaPredicted RBP8.22□□□□□ -1.09
LIMD1-204ENST00000474665 LY9Q9HBG7 655 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 AS3MTQ9HBK9 375 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 FBXO28Q9NVF7 368 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 STX8Q9UNK0 236 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 AGTPBP1Q9UPW5 1226 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 HCN4Q9Y3Q4 1203 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 TNKSO95271 1327 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 CACNA1AO00555 2505 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 PDHXO00330 501 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 SH2B2O14492 632 aaPredicted RBP8.21□□□□□ -1.1
LIMD1-204ENST00000474665 PRC1O43663 620 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 SNHG28P0DPA3 235 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 CYP2C8P10632 490 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 TOP1P11387 765 aaKnown RBP8.21□□□□□ -1.1
LIMD1-204ENST00000474665 ELNP15502 786 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 NT5C2P49902 561 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 TRDNQ13061 729 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 SLC35G1Q2M3R5 365 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 C17orf99Q6UX52 265 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 CATSPERGQ6ZRH7 1159 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 DHX32Q7L7V1 743 aaKnown RBP8.21□□□□□ -1.1
LIMD1-204ENST00000474665 RALYLQ86SE5 291 aaKnown RBP8.21□□□□□ -1.1
LIMD1-204ENST00000474665 GMCL1P1Q8NEA9 526 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 ADAMTS19Q8TE59 1207 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 P2RX7Q99572 595 aaKnown RBP8.21□□□□□ -1.1
LIMD1-204ENST00000474665 FEZ1Q99689 392 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 LRFN3Q9BTN0 628 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 C1QTNF1Q9BXJ1 281 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 AGXT2Q9BYV1 514 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 UPF3BQ9BZI7 483 aaKnown RBP8.21□□□□□ -1.1
LIMD1-204ENST00000474665 CRISPLD2Q9H0B8 497 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 ASCC2Q9H1I8 757 aaPredicted RBP8.21□□□□□ -1.1
LIMD1-204ENST00000474665 RPAP3Q9H6T3 665 aaPredicted RBP8.21□□□□□ -1.1
LIMD1-204ENST00000474665 ARHGEF10LQ9HCE6 1279 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 ZSWIM6Q9HCJ5 1215 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 SYNPO2Q9UMS6 1093 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 GABRQQ9UN88 632 aa8.21□□□□□ -1.1
LIMD1-204ENST00000474665 LAMA2P24043 3122 aaKnown RBP8.2□□□□□ -1.1
LIMD1-204ENST00000474665 SPDYE16A6NNV3 312 aaPredicted RBP8.2□□□□□ -1.1
LIMD1-204ENST00000474665 IFIT3O14879 490 aaKnown RBP8.2□□□□□ -1.1
LIMD1-204ENST00000474665 CNMDO75829 334 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 INHAP05111 366 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 PDHBP11177 359 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 ZKSCAN1P17029 563 aaPredicted RBP8.2□□□□□ -1.1
LIMD1-204ENST00000474665 RPS6KB1P23443 525 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 MCCP23508 829 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 MCM5P33992 734 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 RBM25P49756 843 aaKnown RBP8.2□□□□□ -1.1
LIMD1-204ENST00000474665 USP14P54578 494 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 ANAPC15P60006 121 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 TROAPQ12815 778 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 KRT32Q14532 448 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 TMEM67Q5HYA8 995 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 FAM83BQ5T0W9 1011 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 SLFN13Q68D06 897 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 TTBK2Q6IQ55 1244 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 IQCA1Q86XH1 822 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 SLAIN1Q8ND83 568 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 LPAR1Q92633 364 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 GMCL1Q96IK5 515 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 UHRF1Q96T88 793 aaPredicted RBP8.2□□□□□ -1.1
LIMD1-204ENST00000474665 UBAC1Q9BSL1 405 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 MTA3Q9BTC8 594 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 TM6SF1Q9BZW5 370 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 TXNRD2Q9NNW7 524 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 ZCCHC17Q9NP64 241 aaKnown RBP8.2□□□□□ -1.1
LIMD1-204ENST00000474665 BRPF3Q9ULD4 1205 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 SLC45A1Q9Y2W3 748 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 WDR19Q8NEZ3 1342 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 A0A0G2JMZ2 1700 aa8.2□□□□□ -1.1
LIMD1-204ENST00000474665 MYH6P13533 1939 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 ZNFX1Q9P2E3 1918 aaKnown RBP8.19□□□□□ -1.1
LIMD1-204ENST00000474665 USP17L15C9J2P7 530 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 USP17L13C9JLJ4 530 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 USP17L11C9JVI0 530 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 USP17L18D6R9N7 530 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 USP17L22D6RA61 530 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 USP17L17D6RBQ6 530 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 USP17L19D6RCP7 530 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 USP17L20D6RJB6 530 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 WDR46O15213 610 aaKnown RBP8.19□□□□□ -1.1
LIMD1-204ENST00000474665 ADCY3O60266 1144 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 BCRP11274 1271 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 CASTP20810 708 aaKnown RBP8.19□□□□□ -1.1
LIMD1-204ENST00000474665 LIFRP42702 1097 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 ZNF543Q08ER8 600 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 USP17L24Q0WX57 530 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 TOB2Q14106 344 aaPredicted RBP8.19□□□□□ -1.1
LIMD1-204ENST00000474665 KCTD1Q719H9 257 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms