RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 Q6ZUG5 572 aa18.4■□□□□ 0.54
COL1A1-204ENST00000474644 MB21D1Q8N884 522 aa18.4■□□□□ 0.54
COL1A1-204ENST00000474644 CHURC1Q8WUH1 139 aa18.4■□□□□ 0.54
COL1A1-204ENST00000474644 MYL10Q9BUA6 226 aa18.4■□□□□ 0.54
COL1A1-204ENST00000474644 BACH2Q9BYV9 841 aa18.4■□□□□ 0.54
COL1A1-204ENST00000474644 C22orf23Q9BZE7 217 aa18.4■□□□□ 0.54
COL1A1-204ENST00000474644 UPF2Q9HAU5 1272 aaKnown RBP18.4■□□□□ 0.54
COL1A1-204ENST00000474644 PARP1P09874 1014 aaKnown RBP18.39■□□□□ 0.53
COL1A1-204ENST00000474644 SLC16A2P36021 539 aa18.39■□□□□ 0.53
COL1A1-204ENST00000474644 FGD1P98174 961 aa18.39■□□□□ 0.53
COL1A1-204ENST00000474644 GRM4Q14833 912 aa18.39■□□□□ 0.53
COL1A1-204ENST00000474644 FBXL16Q8N461 479 aa18.39■□□□□ 0.53
COL1A1-204ENST00000474644 REPS2Q8NFH8 660 aa18.39■□□□□ 0.53
COL1A1-204ENST00000474644 GPRC5AQ8NFJ5 357 aa18.39■□□□□ 0.53
COL1A1-204ENST00000474644 CD99L2Q8TCZ2 262 aa18.39■□□□□ 0.53
COL1A1-204ENST00000474644 AGXT2Q9BYV1 514 aa18.39■□□□□ 0.53
COL1A1-204ENST00000474644 MAD2L2Q9UI95 211 aa18.39■□□□□ 0.53
COL1A1-204ENST00000474644 PRR12Q9ULL5 1215 aa18.39■□□□□ 0.53
COL1A1-204ENST00000474644 SLC12A7Q9Y666 1083 aa18.39■□□□□ 0.53
COL1A1-204ENST00000474644 RBM25P49756 843 aaKnown RBP18.38■□□□□ 0.53
COL1A1-204ENST00000474644 CAP1Q01518 475 aa18.38■□□□□ 0.53
COL1A1-204ENST00000474644 TMEM132BQ14DG7 1078 aa18.38■□□□□ 0.53
COL1A1-204ENST00000474644 Q3C1V9 767 aa18.38■□□□□ 0.53
COL1A1-204ENST00000474644 SYDE2Q5VT97 1194 aa18.38■□□□□ 0.53
COL1A1-204ENST00000474644 APOA5Q6Q788 366 aa18.38■□□□□ 0.53
COL1A1-204ENST00000474644 STAG2Q8N3U4 1231 aa18.38■□□□□ 0.53
COL1A1-204ENST00000474644 NUP133Q8WUM0 1156 aa18.38■□□□□ 0.53
COL1A1-204ENST00000474644 BRF1Q92994 677 aa18.38■□□□□ 0.53
COL1A1-204ENST00000474644 ERO1AQ96HE7 468 aa18.38■□□□□ 0.53
COL1A1-204ENST00000474644 ARHGAP39Q9C0H5 1083 aa18.38■□□□□ 0.53
COL1A1-204ENST00000474644 CPVLQ9H3G5 476 aa18.38■□□□□ 0.53
COL1A1-204ENST00000474644 SLC38A10Q9HBR0 1119 aa18.38■□□□□ 0.53
COL1A1-204ENST00000474644 BRPF3Q9ULD4 1205 aa18.38■□□□□ 0.53
COL1A1-204ENST00000474644 ZSWIM8A7E2V4 1837 aa18.37■□□□□ 0.53
COL1A1-204ENST00000474644 KLF18A0A0U1RQI7 1052 aa18.37■□□□□ 0.53
COL1A1-204ENST00000474644 PALM3A6NDB9 673 aaPredicted RBP18.37■□□□□ 0.53
COL1A1-204ENST00000474644 ZBED4O75132 1171 aa18.37■□□□□ 0.53
COL1A1-204ENST00000474644 ECM2O94769 699 aaPredicted RBP18.37■□□□□ 0.53
COL1A1-204ENST00000474644 RXRAP19793 462 aa18.37■□□□□ 0.53
COL1A1-204ENST00000474644 CTGFP29279 349 aa18.37■□□□□ 0.53
COL1A1-204ENST00000474644 MICU3Q86XE3 530 aa18.37■□□□□ 0.53
COL1A1-204ENST00000474644 RAB11FIP4Q86YS3 637 aa18.37■□□□□ 0.53
COL1A1-204ENST00000474644 MAP3K14Q99558 947 aa18.37■□□□□ 0.53
COL1A1-204ENST00000474644 SPATC1LQ9H0A9 340 aa18.37■□□□□ 0.53
COL1A1-204ENST00000474644 ZNF214Q9UL59 606 aaPredicted RBP18.37■□□□□ 0.53
COL1A1-204ENST00000474644 CALM1P0DP23 149 aa18.36■□□□□ 0.53
COL1A1-204ENST00000474644 CALM2P0DP24 149 aa18.36■□□□□ 0.53
COL1A1-204ENST00000474644 CALM3P0DP25 149 aa18.36■□□□□ 0.53
COL1A1-204ENST00000474644 APOBRQ0VD83 1088 aa18.36■□□□□ 0.53
COL1A1-204ENST00000474644 TOB2Q14106 344 aaPredicted RBP18.36■□□□□ 0.53
COL1A1-204ENST00000474644 KIF22Q14807 665 aa18.36■□□□□ 0.53
COL1A1-204ENST00000474644 CTCFLQ8NI51 663 aaPredicted RBP18.36■□□□□ 0.53
COL1A1-204ENST00000474644 TRIM47Q96LD4 638 aa18.36■□□□□ 0.53
COL1A1-204ENST00000474644 MOV10L1Q9BXT6 1211 aaKnown RBP18.36■□□□□ 0.53
COL1A1-204ENST00000474644 UBA5Q9GZZ9 404 aa18.36■□□□□ 0.53
COL1A1-204ENST00000474644 PORCNQ9H237 461 aa18.36■□□□□ 0.53
COL1A1-204ENST00000474644 PDRG1Q9NUG6 133 aa18.36■□□□□ 0.53
COL1A1-204ENST00000474644 KLRF2D3W0D1 207 aa18.35■□□□□ 0.53
COL1A1-204ENST00000474644 ATP2A1O14983 1001 aa18.35■□□□□ 0.53
COL1A1-204ENST00000474644 FDX1P10109 184 aa18.35■□□□□ 0.53
COL1A1-204ENST00000474644 FCGRTP55899 365 aa18.35■□□□□ 0.53
COL1A1-204ENST00000474644 SNAP25P60880 206 aa18.35■□□□□ 0.53
COL1A1-204ENST00000474644 CCNA1P78396 465 aa18.35■□□□□ 0.53
COL1A1-204ENST00000474644 PLS1Q14651 629 aa18.35■□□□□ 0.53
COL1A1-204ENST00000474644 SYNE3Q6ZMZ3 975 aa18.35■□□□□ 0.53
COL1A1-204ENST00000474644 CCDC144CPQ8IYA2 1237 aa18.35■□□□□ 0.53
COL1A1-204ENST00000474644 KIF2CQ99661 725 aa18.35■□□□□ 0.53
COL1A1-204ENST00000474644 TEX13BQ9BXU2 312 aa18.35■□□□□ 0.53
COL1A1-204ENST00000474644 RANBP17Q9H2T7 1088 aaKnown RBP18.35■□□□□ 0.53
COL1A1-204ENST00000474644 RAVER2Q9HCJ3 691 aaKnown RBP18.35■□□□□ 0.53
COL1A1-204ENST00000474644 CTDP1Q9Y5B0 961 aaPredicted RBP18.35■□□□□ 0.53
COL1A1-204ENST00000474644 COL11A1P12107 1806 aaPredicted RBP18.35■□□□□ 0.53
COL1A1-204ENST00000474644 ZNF536O15090 1300 aa18.34■□□□□ 0.53
COL1A1-204ENST00000474644 GOLGA8BA8MQT2 603 aa18.34■□□□□ 0.53
COL1A1-204ENST00000474644 ZBTB43O43298 467 aa18.34■□□□□ 0.53
COL1A1-204ENST00000474644 KIF5BP33176 963 aa18.34■□□□□ 0.53
COL1A1-204ENST00000474644 PSMC4P43686 418 aa18.34■□□□□ 0.53
COL1A1-204ENST00000474644 RCAN1P53805 252 aa18.34■□□□□ 0.53
COL1A1-204ENST00000474644 OAZ1P54368 228 aa18.34■□□□□ 0.53
COL1A1-204ENST00000474644 SLC35G1Q2M3R5 365 aa18.34■□□□□ 0.53
COL1A1-204ENST00000474644 SNRNP48Q6IEG0 339 aaKnown RBP18.34■□□□□ 0.53
COL1A1-204ENST00000474644 ADGRF4Q8IZF3 695 aa18.34■□□□□ 0.53
COL1A1-204ENST00000474644 TBC1D32Q96NH3 1257 aa18.34■□□□□ 0.53
COL1A1-204ENST00000474644 EFCC1Q9HA90 598 aa18.34■□□□□ 0.53
COL1A1-204ENST00000474644 NID2Q14112 1375 aa18.33■□□□□ 0.53
COL1A1-204ENST00000474644 GOLGA8AA7E2F4 631 aa18.33■□□□□ 0.52
COL1A1-204ENST00000474644 TNPO2O14787 897 aaKnown RBP18.33■□□□□ 0.52
COL1A1-204ENST00000474644 DHX16O60231 1041 aaKnown RBP18.33■□□□□ 0.52
COL1A1-204ENST00000474644 FMNL1O95466 1100 aaPredicted RBP18.33■□□□□ 0.52
COL1A1-204ENST00000474644 MAPK4P31152 587 aa18.33■□□□□ 0.52
COL1A1-204ENST00000474644 STAT3P40763 770 aa18.33■□□□□ 0.52
COL1A1-204ENST00000474644 EVCP57679 992 aa18.33■□□□□ 0.52
COL1A1-204ENST00000474644 CCDC174Q6PII3 467 aa18.33■□□□□ 0.52
COL1A1-204ENST00000474644 NBPF11Q86T75 865 aa18.33■□□□□ 0.52
COL1A1-204ENST00000474644 RIOX2Q8IUF8 465 aa18.33■□□□□ 0.52
COL1A1-204ENST00000474644 CPXCR1Q8N123 301 aa18.33■□□□□ 0.52
COL1A1-204ENST00000474644 FANCBQ8NB91 859 aa18.33■□□□□ 0.52
COL1A1-204ENST00000474644 SHCBP1Q8NEM2 672 aa18.33■□□□□ 0.52
COL1A1-204ENST00000474644 ALDH8A1Q9H2A2 487 aaPredicted RBP18.33■□□□□ 0.52
COL1A1-204ENST00000474644 JMJD4Q9H9V9 463 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms