RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 DPYDQ12882 1025 aa11.17□□□□□ -0.62
USP39-214ENST00000474572 DHX8Q14562 1220 aaKnown RBP11.17□□□□□ -0.62
USP39-214ENST00000474572 GRIPAP1Q4V328 841 aa11.17□□□□□ -0.62
USP39-214ENST00000474572 PPP1R18Q6NYC8 613 aa11.17□□□□□ -0.62
USP39-214ENST00000474572 DRC7Q8IY82 874 aa11.17□□□□□ -0.62
USP39-214ENST00000474572 SUPT20HQ8NEM7 779 aa11.17□□□□□ -0.62
USP39-214ENST00000474572 ENOX1Q8TC92 643 aaKnown RBP11.17□□□□□ -0.62
USP39-214ENST00000474572 FBXW7Q969H0 707 aa11.17□□□□□ -0.62
USP39-214ENST00000474572 MTMR8Q96EF0 704 aa11.17□□□□□ -0.62
USP39-214ENST00000474572 RRP36Q96EU6 259 aaKnown RBP11.17□□□□□ -0.62
USP39-214ENST00000474572 PAGE5Q96GU1 130 aa11.17□□□□□ -0.62
USP39-214ENST00000474572 DNAJC18Q9H819 358 aa11.17□□□□□ -0.62
USP39-214ENST00000474572 CCDC194A0A1B0GVG4 234 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 VWA3AA6NCI4 1184 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 USP17L5A8MUK1 530 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 G3V3G9 751 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 SMC2O95347 1197 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 TTLL1O95922 423 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 ZNF18P17022 549 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 ERCC5P28715 1186 aaPredicted RBP11.16□□□□□ -0.62
USP39-214ENST00000474572 GNA11P29992 359 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 CHRNA5P30532 468 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 MCM7P33993 719 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 FANCCQ00597 558 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 NFIAQ12857 509 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 DCAF8Q5TAQ9 597 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 ISM2Q6H9L7 571 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 PDXDC2PQ6P474 469 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 POTEAQ6S8J7 498 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 HEATR3Q7Z4Q2 680 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 LRRC8AQ8IWT6 810 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 RASGRP4Q8TDF6 673 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 MKL1Q969V6 931 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 DHX58Q96C10 678 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 GSDMAQ96QA5 445 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 PIGSQ96S52 555 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 XPO4Q9C0E2 1151 aaKnown RBP11.16□□□□□ -0.62
USP39-214ENST00000474572 CCSER1Q9C0I3 900 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 C6orf50Q9HD87 102 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 KCNQ5Q9NR82 932 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 KCND1Q9NSA2 647 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 FAM198AQ9UFP1 575 aa11.16□□□□□ -0.62
USP39-214ENST00000474572 CBFA2T2O43439 604 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 TPM2P07951 284 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 KCNJ6P48051 423 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 NAPAP54920 295 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 CCZ1BP86790 482 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 CCZ1P86791 482 aaPredicted RBP11.15□□□□□ -0.62
USP39-214ENST00000474572 LRMPQ12912 555 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 SEMA3FQ13275 785 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 NONOQ15233 471 aaKnown RBP eCLIP11.15□□□□□ -0.62
USP39-214ENST00000474572 GPATCH4Q5T3I0 446 aaKnown RBP11.15□□□□□ -0.62
USP39-214ENST00000474572 TATDN1Q6P1N9 297 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 SH3BP5LQ7L8J4 393 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 GRAMD1CQ8IYS0 662 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 PDILTQ8N807 584 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 IQUBQ8NA54 791 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 MED15Q96RN5 788 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 CPVLQ9H3G5 476 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 IFNKQ9P0W0 207 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 NYAP2Q9P242 653 aa11.15□□□□□ -0.62
USP39-214ENST00000474572 SEC63Q9UGP8 760 aaKnown RBP11.15□□□□□ -0.62
USP39-214ENST00000474572 BRCA1P38398 1863 aaKnown RBP11.15□□□□□ -0.63
USP39-214ENST00000474572 SMCO2A6NFE2 343 aa11.14□□□□□ -0.63
USP39-214ENST00000474572 GTPBP6O43824 516 aaPredicted RBP11.14□□□□□ -0.63
USP39-214ENST00000474572 ENTPD3O75355 529 aa11.14□□□□□ -0.63
USP39-214ENST00000474572 ATP1A3P13637 1013 aa11.14□□□□□ -0.63
USP39-214ENST00000474572 LMOD1P29536 600 aaPredicted RBP11.14□□□□□ -0.63
USP39-214ENST00000474572 EN1Q05925 392 aaPredicted RBP11.14□□□□□ -0.63
USP39-214ENST00000474572 FMR1Q06787 632 aaKnown RBP eCLIP11.14□□□□□ -0.633e-6■■■□□ 16.1
USP39-214ENST00000474572 CUL4BQ13620 913 aa11.14□□□□□ -0.63
USP39-214ENST00000474572 AOC3Q16853 763 aa11.14□□□□□ -0.63
USP39-214ENST00000474572 INF2Q27J81 1249 aa11.14□□□□□ -0.63
USP39-214ENST00000474572 ZFPM1Q8IX07 1006 aa11.14□□□□□ -0.63
USP39-214ENST00000474572 LRRC47Q8N1G4 583 aaKnown RBP11.14□□□□□ -0.63
USP39-214ENST00000474572 CCDC150Q8NCX0 1101 aa11.14□□□□□ -0.63
USP39-214ENST00000474572 NAP1L5Q96NT1 182 aaPredicted RBP11.14□□□□□ -0.63
USP39-214ENST00000474572 MTRQ99707 1265 aa11.14□□□□□ -0.63
USP39-214ENST00000474572 TMEM60Q9H2L4 133 aa11.14□□□□□ -0.63
USP39-214ENST00000474572 PI4KBQ9UBF8 816 aa11.14□□□□□ -0.63
USP39-214ENST00000474572 COL4A5P29400 1685 aa11.14□□□□□ -0.63
USP39-214ENST00000474572 FRMPD2Q68DX3 1309 aaPredicted RBP11.13□□□□□ -0.63
USP39-214ENST00000474572 DDTLA6NHG4 134 aaPredicted RBP11.13□□□□□ -0.63
USP39-214ENST00000474572 YDJCA8MPS7 323 aa11.13□□□□□ -0.63
USP39-214ENST00000474572 TXLNAP40222 546 aa11.13□□□□□ -0.63
USP39-214ENST00000474572 CLK2P49760 499 aaKnown RBP11.13□□□□□ -0.63
USP39-214ENST00000474572 SOGA3Q5TF21 947 aa11.13□□□□□ -0.63
USP39-214ENST00000474572 DTHD1Q6ZMT9 781 aa11.13□□□□□ -0.63
USP39-214ENST00000474572 NEK8Q86SG6 692 aa11.13□□□□□ -0.63
USP39-214ENST00000474572 KIAA0825Q8IV33 1275 aa11.13□□□□□ -0.63
USP39-214ENST00000474572 C17orf53Q8N3J3 647 aaPredicted RBP11.13□□□□□ -0.63
USP39-214ENST00000474572 DCAF4Q8WV16 495 aa11.13□□□□□ -0.63
USP39-214ENST00000474572 DPF2Q92785 391 aa11.13□□□□□ -0.63
USP39-214ENST00000474572 AK8Q96MA6 479 aa11.13□□□□□ -0.63
USP39-214ENST00000474572 PSMD1Q99460 953 aa11.13□□□□□ -0.63
USP39-214ENST00000474572 UBA5Q9GZZ9 404 aa11.13□□□□□ -0.63
USP39-214ENST00000474572 JMJD4Q9H9V9 463 aa11.13□□□□□ -0.63
USP39-214ENST00000474572 MAGEF1Q9HAY2 307 aa11.13□□□□□ -0.63
USP39-214ENST00000474572 DISC1Q9NRI5 854 aa11.13□□□□□ -0.63
USP39-214ENST00000474572 FANCLQ9NW38 375 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms