RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 NPR1P16066 1061 aa16.31■□□□□ 0.2
NELFCD-204ENST00000474543 FECHP22830 423 aa16.31■□□□□ 0.2
NELFCD-204ENST00000474543 FXR1P51114 621 aaKnown RBP eCLIP16.31■□□□□ 0.2
NELFCD-204ENST00000474543 ATP2C1P98194 919 aaPredicted RBP16.31■□□□□ 0.2
NELFCD-204ENST00000474543 PTGDRQ13258 359 aa16.31■□□□□ 0.2
NELFCD-204ENST00000474543 DALRD3Q5D0E6 543 aaKnown RBP16.31■□□□□ 0.2
NELFCD-204ENST00000474543 TTC38Q5R3I4 469 aa16.31■□□□□ 0.2
NELFCD-204ENST00000474543 SRGAP1Q7Z6B7 1085 aa16.31■□□□□ 0.2
NELFCD-204ENST00000474543 TTLL6Q8N841 843 aa16.31■□□□□ 0.2
NELFCD-204ENST00000474543 STAMQ92783 540 aa16.31■□□□□ 0.2
NELFCD-204ENST00000474543 BRMS1Q9HCU9 246 aa16.31■□□□□ 0.2
NELFCD-204ENST00000474543 BAZ2BQ9UIF8 2168 aaKnown RBP16.31■□□□□ 0.2
NELFCD-204ENST00000474543 XDHP47989 1333 aa16.3■□□□□ 0.2
NELFCD-204ENST00000474543 ITIH6Q6UXX5 1313 aa16.3■□□□□ 0.2
NELFCD-204ENST00000474543 COL11A2P13942 1736 aaPredicted RBP16.3■□□□□ 0.2
NELFCD-204ENST00000474543 OAS2P29728 719 aaKnown RBP16.3■□□□□ 0.2
NELFCD-204ENST00000474543 DYNLL1P63167 89 aaKnown RBP16.3■□□□□ 0.2
NELFCD-204ENST00000474543 SMC1AQ14683 1233 aaKnown RBP16.3■□□□□ 0.2
NELFCD-204ENST00000474543 E2F4Q16254 413 aa16.3■□□□□ 0.2
NELFCD-204ENST00000474543 JAKMIP3Q5VZ66 844 aa16.3■□□□□ 0.2
NELFCD-204ENST00000474543 STYK1Q6J9G0 422 aa16.3■□□□□ 0.2
NELFCD-204ENST00000474543 CNGA4Q8IV77 575 aa16.3■□□□□ 0.2
NELFCD-204ENST00000474543 CCDC51Q96ER9 411 aa16.3■□□□□ 0.2
NELFCD-204ENST00000474543 ZSWIM4Q9H7M6 989 aa16.3■□□□□ 0.2
NELFCD-204ENST00000474543 ZCCHC17Q9NP64 241 aaKnown RBP16.3■□□□□ 0.2
NELFCD-204ENST00000474543 CDC23Q9UJX2 597 aa16.3■□□□□ 0.2
NELFCD-204ENST00000474543 CTNND2Q9UQB3 1225 aa16.3■□□□□ 0.2
NELFCD-204ENST00000474543 COL4A1P02462 1669 aa16.3■□□□□ 0.2
NELFCD-204ENST00000474543 ZNF804BA4D1E1 1349 aa16.3■□□□□ 0.2
NELFCD-204ENST00000474543 MYH13Q9UKX3 1938 aa16.3■□□□□ 0.2
NELFCD-204ENST00000474543 COBLO75128 1261 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 FGRP09769 529 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 GYG1P46976 350 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 CHMP4BP1P59074 171 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 CRY2Q49AN0 593 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 ZNF569Q5MCW4 686 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 TMTC3Q6ZXV5 915 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 IQCA1Q86XH1 822 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 CNKSR1Q969H4 720 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 CCDC151A5D8V7 595 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 LRRC10BA6NIK2 292 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 CALM1P0DP23 149 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 CALM2P0DP24 149 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 CALM3P0DP25 149 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 CCT6AP40227 531 aaKnown RBP16.29■□□□□ 0.2
NELFCD-204ENST00000474543 BRD3Q15059 726 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 KRT31Q15323 416 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 RBM17Q96I25 401 aaKnown RBP16.29■□□□□ 0.2
NELFCD-204ENST00000474543 BLZF1Q9H2G9 400 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 LIMA1Q9UHB6 759 aaKnown RBP16.29■□□□□ 0.2
NELFCD-204ENST00000474543 BRCA1P38398 1863 aaKnown RBP16.29■□□□□ 0.2
NELFCD-204ENST00000474543 LAMB2P55268 1798 aa16.29■□□□□ 0.2
NELFCD-204ENST00000474543 COL1A1P02452 1464 aaPredicted RBP16.28■□□□□ 0.2
NELFCD-204ENST00000474543 WTIPA6NIX2 430 aaPredicted RBP16.28■□□□□ 0.2
NELFCD-204ENST00000474543 YBX3P16989 372 aaKnown RBP eCLIP16.28■□□□□ 0.21e-10■□□□□ 8.4
NELFCD-204ENST00000474543 ALDH1B1P30837 517 aa16.28■□□□□ 0.2
NELFCD-204ENST00000474543 LONRF2Q1L5Z9 754 aa16.28■□□□□ 0.2
NELFCD-204ENST00000474543 PDXDC2PQ6P474 469 aa16.28■□□□□ 0.2
NELFCD-204ENST00000474543 SRBD1Q8N5C6 995 aaKnown RBP16.28■□□□□ 0.2
NELFCD-204ENST00000474543 CEP112Q8N8E3 955 aa16.28■□□□□ 0.2
NELFCD-204ENST00000474543 IQUBQ8NA54 791 aa16.28■□□□□ 0.2
NELFCD-204ENST00000474543 MTRQ99707 1265 aa16.28■□□□□ 0.2
NELFCD-204ENST00000474543 CALCOCO1Q9P1Z2 691 aa16.28■□□□□ 0.2
NELFCD-204ENST00000474543 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
NELFCD-204ENST00000474543 DDAH1O94760 285 aa16.28■□□□□ 0.2
NELFCD-204ENST00000474543 IL17AQ16552 155 aa16.28■□□□□ 0.2
NELFCD-204ENST00000474543 RRAGBQ5VZM2 374 aa16.28■□□□□ 0.2
NELFCD-204ENST00000474543 CTR9Q6PD62 1173 aa16.28■□□□□ 0.2
NELFCD-204ENST00000474543 TMTC1Q8IUR5 882 aa16.28■□□□□ 0.2
NELFCD-204ENST00000474543 ACRBPQ8NEB7 543 aa16.28■□□□□ 0.2
NELFCD-204ENST00000474543 ANKZF1Q9H8Y5 726 aa16.28■□□□□ 0.2
NELFCD-204ENST00000474543 GNL3LQ9NVN8 582 aaKnown RBP16.28■□□□□ 0.2
NELFCD-204ENST00000474543 PUF60Q9UHX1 559 aaKnown RBP16.28■□□□□ 0.2
NELFCD-204ENST00000474543 TTF2Q9UNY4 1162 aaKnown RBP16.28■□□□□ 0.2
NELFCD-204ENST00000474543 RNF225M0QZC1 329 aaPredicted RBP16.27■□□□□ 0.2
NELFCD-204ENST00000474543 N4BP3O15049 544 aa16.27■□□□□ 0.2
NELFCD-204ENST00000474543 ERVK-24P63145 666 aa16.27■□□□□ 0.2
NELFCD-204ENST00000474543 TUBB2AQ13885 445 aa16.27■□□□□ 0.2
NELFCD-204ENST00000474543 SF3B3Q15393 1217 aaKnown RBP16.27■□□□□ 0.2
NELFCD-204ENST00000474543 SLC35F6Q8N357 371 aa16.27■□□□□ 0.2
NELFCD-204ENST00000474543 ZNF384Q8TF68 577 aa16.27■□□□□ 0.2
NELFCD-204ENST00000474543 TUBB2BQ9BVA1 445 aa16.27■□□□□ 0.2
NELFCD-204ENST00000474543 RWDD2AQ9UIY3 292 aa16.27■□□□□ 0.2
NELFCD-204ENST00000474543 A0A1B0GUL6 1792 aa16.26■□□□□ 0.19
NELFCD-204ENST00000474543 CTAGE9A4FU28 777 aa16.26■□□□□ 0.19
NELFCD-204ENST00000474543 MAP2K7O14733 419 aa16.26■□□□□ 0.19
NELFCD-204ENST00000474543 GTPBP6O43824 516 aaPredicted RBP16.26■□□□□ 0.19
NELFCD-204ENST00000474543 ABL1P00519 1130 aa16.26■□□□□ 0.19
NELFCD-204ENST00000474543 PCP11498 1178 aaKnown RBP16.26■□□□□ 0.19
NELFCD-204ENST00000474543 CDC25AP30304 524 aa16.26■□□□□ 0.19
NELFCD-204ENST00000474543 HOXA10P31260 410 aaPredicted RBP16.26■□□□□ 0.19
NELFCD-204ENST00000474543 COPB1P53618 953 aaKnown RBP16.26■□□□□ 0.19
NELFCD-204ENST00000474543 KIF4BQ2VIQ3 1234 aa16.26■□□□□ 0.19
NELFCD-204ENST00000474543 CDC5LQ99459 802 aaKnown RBP16.26■□□□□ 0.19
NELFCD-204ENST00000474543 VPS16Q9H269 839 aa16.26■□□□□ 0.19
NELFCD-204ENST00000474543 ABHD10Q9NUJ1 306 aa16.26■□□□□ 0.19
NELFCD-204ENST00000474543 ZNF219Q9P2Y4 722 aaPredicted RBP16.26■□□□□ 0.19
NELFCD-204ENST00000474543 TRAPPC10P48553 1259 aa16.26■□□□□ 0.19
NELFCD-204ENST00000474543 PIK3AP1Q6ZUJ8 805 aa16.26■□□□□ 0.19
NELFCD-204ENST00000474543 MSANTD4Q8NCY6 345 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms