RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 RNF4P78317 190 aa6.37□□□□□ -1.39
TMEM50B-208ENST00000474272 CLCQ05315 142 aa6.37□□□□□ -1.39
TMEM50B-208ENST00000474272 MLECQ14165 292 aa6.37□□□□□ -1.39
TMEM50B-208ENST00000474272 ATG4CQ96DT6 458 aa6.37□□□□□ -1.39
TMEM50B-208ENST00000474272 SIGLEC10Q96LC7 697 aa6.37□□□□□ -1.39
TMEM50B-208ENST00000474272 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.37□□□□□ -1.39
TMEM50B-208ENST00000474272 EPB41L4AQ9HCS5 686 aaPredicted RBP6.37□□□□□ -1.39
TMEM50B-208ENST00000474272 PODXL2Q9NZ53 605 aa6.37□□□□□ -1.39
TMEM50B-208ENST00000474272 RFXAPO00287 272 aa6.36□□□□□ -1.39
TMEM50B-208ENST00000474272 SEZ6Q53EL9 994 aa6.36□□□□□ -1.39
TMEM50B-208ENST00000474272 GK5Q6ZS86 529 aa6.36□□□□□ -1.39
TMEM50B-208ENST00000474272 ERMP1Q7Z2K6 904 aa6.36□□□□□ -1.39
TMEM50B-208ENST00000474272 ZNF296Q8WUU4 475 aaPredicted RBP6.36□□□□□ -1.39
TMEM50B-208ENST00000474272 CRTAC1Q9NQ79 661 aa6.36□□□□□ -1.39
TMEM50B-208ENST00000474272 UBP1Q9NZI7 540 aa6.36□□□□□ -1.39
TMEM50B-208ENST00000474272 FAM86C2PA6NEL3 165 aa6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 SIGLEC6O43699 453 aa6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 GREM1O60565 184 aa6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 CLEC3AO75596 197 aa6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 ATE1O95260 518 aa6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 PNLIPP16233 465 aa6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 AFF3P51826 1226 aaKnown RBP6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 CDR1P51861 262 aa6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 NCKAP1LP55160 1127 aa6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 CDCP2Q5VXM1 449 aa6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 TMEM192Q8IY95 271 aa6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 ZDHHC14Q8IZN3 488 aa6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 FEZF2Q8TBJ5 459 aa6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 DACT3Q96B18 629 aaPredicted RBP6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 CNNM2Q9H8M5 875 aa6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 CHST7Q9NS84 486 aa6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 GFOD1Q9NXC2 390 aa6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 GPR55Q9Y2T6 319 aaPredicted RBP6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 SUPT16HQ9Y5B9 1047 aaKnown RBP6.35□□□□□ -1.39
TMEM50B-208ENST00000474272 OTOL1A6NHN0 477 aaPredicted RBP6.34□□□□□ -1.39
TMEM50B-208ENST00000474272 FADS2P1A8MWK0 482 aa6.34□□□□□ -1.39
TMEM50B-208ENST00000474272 N4BP3O15049 544 aa6.34□□□□□ -1.39
TMEM50B-208ENST00000474272 MCM4P33991 863 aa6.34□□□□□ -1.39
TMEM50B-208ENST00000474272 CTSKP43235 329 aa6.34□□□□□ -1.39
TMEM50B-208ENST00000474272 HSF5Q4G112 596 aaPredicted RBP6.34□□□□□ -1.39
TMEM50B-208ENST00000474272 CDADC1Q9BWV3 514 aa6.34□□□□□ -1.39
TMEM50B-208ENST00000474272 LRRC3Q9BY71 257 aa6.34□□□□□ -1.39
TMEM50B-208ENST00000474272 GZF1Q9H116 711 aaPredicted RBP6.34□□□□□ -1.39
TMEM50B-208ENST00000474272 XYLT2Q9H1B5 865 aa6.34□□□□□ -1.39
TMEM50B-208ENST00000474272 KLHL14Q9P2G3 628 aa6.34□□□□□ -1.39
TMEM50B-208ENST00000474272 ADAMTS1Q9UHI8 967 aa6.34□□□□□ -1.39
TMEM50B-208ENST00000474272 FBXL21Q9UKT6 434 aa6.34□□□□□ -1.39
TMEM50B-208ENST00000474272 NUDT19A8MXV4 375 aa6.33□□□□□ -1.4
TMEM50B-208ENST00000474272 PRKCAP17252 672 aa6.33□□□□□ -1.4
TMEM50B-208ENST00000474272 CEBPAP49715 358 aaPredicted RBP6.33□□□□□ -1.4
TMEM50B-208ENST00000474272 YBX1P67809 324 aaKnown RBP6.33□□□□□ -1.4
TMEM50B-208ENST00000474272 NLRC3Q7RTR2 1065 aa6.33□□□□□ -1.4
TMEM50B-208ENST00000474272 TMEM151BQ8IW70 566 aa6.33□□□□□ -1.4
TMEM50B-208ENST00000474272 TMEFF1Q8IYR6 380 aa6.33□□□□□ -1.4
TMEM50B-208ENST00000474272 SYT8Q8NBV8 401 aa6.33□□□□□ -1.4
TMEM50B-208ENST00000474272 MZB1Q8WU39 189 aa6.33□□□□□ -1.4
TMEM50B-208ENST00000474272 MKRN2Q9H000 416 aaKnown RBP6.33□□□□□ -1.4
TMEM50B-208ENST00000474272 EHMT1Q9H9B1 1298 aa6.33□□□□□ -1.4
TMEM50B-208ENST00000474272 KCNQ5Q9NR82 932 aa6.33□□□□□ -1.4
TMEM50B-208ENST00000474272 AP5S1Q9NUS5 200 aa6.33□□□□□ -1.4
TMEM50B-208ENST00000474272 ROBO2Q9HCK4 1378 aa6.32□□□□□ -1.4
TMEM50B-208ENST00000474272 ERVFRD-1P60508 538 aa6.32□□□□□ -1.4
TMEM50B-208ENST00000474272 NFIXQ14938 502 aa6.32□□□□□ -1.4
TMEM50B-208ENST00000474272 RAB3GAP1Q15042 981 aa6.32□□□□□ -1.4
TMEM50B-208ENST00000474272 TMC6Q7Z403 805 aa6.32□□□□□ -1.4
TMEM50B-208ENST00000474272 FCRL2Q96LA5 508 aaPredicted RBP6.32□□□□□ -1.4
TMEM50B-208ENST00000474272 SLC6A18Q96N87 628 aa6.32□□□□□ -1.4
TMEM50B-208ENST00000474272 ERVK13-1Q9NX77 482 aa6.32□□□□□ -1.4
TMEM50B-208ENST00000474272 TNFRSF10DQ9UBN6 386 aa6.32□□□□□ -1.4
TMEM50B-208ENST00000474272 GGT7Q9UJ14 662 aa6.32□□□□□ -1.4
TMEM50B-208ENST00000474272 TAF6LQ9Y6J9 622 aa6.32□□□□□ -1.4
TMEM50B-208ENST00000474272 HRKO00198 91 aa6.31□□□□□ -1.4
TMEM50B-208ENST00000474272 MPOP05164 745 aa6.31□□□□□ -1.4
TMEM50B-208ENST00000474272 RAD51AP2Q09MP3 1159 aa6.31□□□□□ -1.4
TMEM50B-208ENST00000474272 GALNT18Q6P9A2 607 aa6.31□□□□□ -1.4
TMEM50B-208ENST00000474272 CNKSR3Q6P9H4 555 aa6.31□□□□□ -1.4
TMEM50B-208ENST00000474272 CRTC3Q6UUV7 619 aa6.31□□□□□ -1.4
TMEM50B-208ENST00000474272 LDHDQ86WU2 507 aa6.31□□□□□ -1.4
TMEM50B-208ENST00000474272 IGDCC3Q8IVU1 814 aa6.31□□□□□ -1.4
TMEM50B-208ENST00000474272 TMEM52Q8NDY8 209 aa6.31□□□□□ -1.4
TMEM50B-208ENST00000474272 NUP43Q8NFH3 380 aa6.31□□□□□ -1.4
TMEM50B-208ENST00000474272 SLC9A7Q96T83 725 aa6.31□□□□□ -1.4
TMEM50B-208ENST00000474272 WTIPA6NIX2 430 aaPredicted RBP6.3□□□□□ -1.4
TMEM50B-208ENST00000474272 IRS4O14654 1257 aaPredicted RBP6.3□□□□□ -1.4
TMEM50B-208ENST00000474272 SASH1O94885 1247 aa6.3□□□□□ -1.4
TMEM50B-208ENST00000474272 VAV1P15498 845 aa6.3□□□□□ -1.4
TMEM50B-208ENST00000474272 NME1P15531 152 aaKnown RBP6.3□□□□□ -1.4
TMEM50B-208ENST00000474272 SYN1P17600 705 aa6.3□□□□□ -1.4
TMEM50B-208ENST00000474272 CYP4F8P98187 520 aa6.3□□□□□ -1.4
TMEM50B-208ENST00000474272 APOBRQ0VD83 1088 aa6.3□□□□□ -1.4
TMEM50B-208ENST00000474272 AUHQ13825 339 aaKnown RBP6.3□□□□□ -1.4
TMEM50B-208ENST00000474272 SLCO6A1Q86UG4 719 aa6.3□□□□□ -1.4
TMEM50B-208ENST00000474272 FAM129CQ86XR2 697 aa6.3□□□□□ -1.4
TMEM50B-208ENST00000474272 JMJD8Q96S16 334 aa6.3□□□□□ -1.4
TMEM50B-208ENST00000474272 IMPACTQ9P2X3 320 aa6.3□□□□□ -1.4
TMEM50B-208ENST00000474272 ZNF205O95201 554 aa6.29□□□□□ -1.4
TMEM50B-208ENST00000474272 ARL4AP40617 200 aa6.29□□□□□ -1.4
TMEM50B-208ENST00000474272 PWWP2AQ96N64 755 aa6.29□□□□□ -1.4
TMEM50B-208ENST00000474272 ADAM7Q9H2U9 754 aa6.29□□□□□ -1.4
TMEM50B-208ENST00000474272 RTEL1Q9NZ71 1219 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms