RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CHURC1Q8WUH1 139 aa13.22□□□□□ -0.29
CKS1B-206ENST00000474215 HTATIP2Q9BUP3 242 aa13.22□□□□□ -0.29
CKS1B-206ENST00000474215 TEX13BQ9BXU2 312 aa13.22□□□□□ -0.29
CKS1B-206ENST00000474215 NBPF3Q9H094 633 aa13.22□□□□□ -0.29
CKS1B-206ENST00000474215 RNF41Q9H4P4 317 aaPredicted RBP13.22□□□□□ -0.29
CKS1B-206ENST00000474215 TCP11L1Q9NUJ3 509 aa13.22□□□□□ -0.29
CKS1B-206ENST00000474215 OGDHLQ9ULD0 1010 aa13.22□□□□□ -0.29
CKS1B-206ENST00000474215 CTDP1Q9Y5B0 961 aaPredicted RBP13.22□□□□□ -0.29
CKS1B-206ENST00000474215 PDE4DIPQ5VU43 2346 aa13.21□□□□□ -0.29
CKS1B-206ENST00000474215 TMEM232C9JQI7 657 aa13.21□□□□□ -0.29
CKS1B-206ENST00000474215 ATP2A1O14983 1001 aa13.21□□□□□ -0.29
CKS1B-206ENST00000474215 FDX1P10109 184 aa13.21□□□□□ -0.29
CKS1B-206ENST00000474215 CYP2C19P33261 490 aa13.21□□□□□ -0.29
CKS1B-206ENST00000474215 SLC1A4P43007 532 aa13.21□□□□□ -0.29
CKS1B-206ENST00000474215 KCTD2Q14681 263 aa13.21□□□□□ -0.29
CKS1B-206ENST00000474215 LHX8Q68G74 356 aa13.21□□□□□ -0.29
CKS1B-206ENST00000474215 SNRNP48Q6IEG0 339 aaKnown RBP13.21□□□□□ -0.29
CKS1B-206ENST00000474215 STAG1Q8WVM7 1258 aa13.21□□□□□ -0.29
CKS1B-206ENST00000474215 DPF3Q92784 378 aa13.21□□□□□ -0.29
CKS1B-206ENST00000474215 CHMP4CQ96CF2 233 aa13.21□□□□□ -0.29
CKS1B-206ENST00000474215 PAWRQ96IZ0 340 aaKnown RBP13.21□□□□□ -0.29
CKS1B-206ENST00000474215 MMP19Q99542 508 aa13.21□□□□□ -0.29
CKS1B-206ENST00000474215 DSCC1Q9BVC3 393 aa13.21□□□□□ -0.29
CKS1B-206ENST00000474215 SLC38A10Q9HBR0 1119 aa13.21□□□□□ -0.29
CKS1B-206ENST00000474215 CTNNA3Q9UI47 895 aa13.21□□□□□ -0.29
CKS1B-206ENST00000474215 ISY1Q9ULR0 285 aaKnown RBP13.21□□□□□ -0.29
CKS1B-206ENST00000474215 PLA2G6O60733 806 aa13.2□□□□□ -0.3
CKS1B-206ENST00000474215 TOP1P11387 765 aaKnown RBP13.2□□□□□ -0.3
CKS1B-206ENST00000474215 SLC4A3P48751 1232 aa13.2□□□□□ -0.3
CKS1B-206ENST00000474215 STAT2P52630 851 aa13.2□□□□□ -0.3
CKS1B-206ENST00000474215 OAZ1P54368 228 aa13.2□□□□□ -0.3
CKS1B-206ENST00000474215 NECAB2Q7Z6G3 386 aa13.2□□□□□ -0.3
CKS1B-206ENST00000474215 FAM160B2Q86V87 743 aa13.2□□□□□ -0.3
CKS1B-206ENST00000474215 TBC1D10CQ8IV04 446 aa13.2□□□□□ -0.3
CKS1B-206ENST00000474215 CPXCR1Q8N123 301 aa13.2□□□□□ -0.3
CKS1B-206ENST00000474215 TTC14Q96N46 770 aa13.2□□□□□ -0.3
CKS1B-206ENST00000474215 RAVER2Q9HCJ3 691 aaKnown RBP13.2□□□□□ -0.3
CKS1B-206ENST00000474215 RIPK3Q9Y572 518 aa13.2□□□□□ -0.3
CKS1B-206ENST00000474215 PARP14Q460N5 1801 aa13.19□□□□□ -0.3
CKS1B-206ENST00000474215 PGK2P07205 417 aa13.19□□□□□ -0.3
CKS1B-206ENST00000474215 CHMLP26374 656 aa13.19□□□□□ -0.3
CKS1B-206ENST00000474215 CNGA1P29973 690 aa13.19□□□□□ -0.3
CKS1B-206ENST00000474215 NT5C2P49902 561 aa13.19□□□□□ -0.3
CKS1B-206ENST00000474215 MNX1P50219 401 aaPredicted RBP13.19□□□□□ -0.3
CKS1B-206ENST00000474215 IKQ13123 557 aaPredicted RBP13.19□□□□□ -0.3
CKS1B-206ENST00000474215 ZNF792Q3KQV3 632 aa13.19□□□□□ -0.3
CKS1B-206ENST00000474215 KCTD1Q719H9 257 aa13.19□□□□□ -0.3
CKS1B-206ENST00000474215 DIS3LQ8TF46 1054 aaKnown RBP13.19□□□□□ -0.3
CKS1B-206ENST00000474215 RUFY2Q8WXA3 655 aa13.19□□□□□ -0.3
CKS1B-206ENST00000474215 ESR2Q92731 530 aa13.19□□□□□ -0.3
CKS1B-206ENST00000474215 MAML3Q96JK9 1138 aa13.19□□□□□ -0.3
CKS1B-206ENST00000474215 TMEM47Q9BQJ4 181 aa13.19□□□□□ -0.3
CKS1B-206ENST00000474215 DIS3Q9Y2L1 958 aaKnown RBP13.19□□□□□ -0.3
CKS1B-206ENST00000474215 MYH4Q9Y623 1939 aa13.18□□□□□ -0.3
CKS1B-206ENST00000474215 H0YGN5 161 aa13.18□□□□□ -0.3
CKS1B-206ENST00000474215 MSCO60682 206 aa13.18□□□□□ -0.3
CKS1B-206ENST00000474215 CYBAP13498 195 aa13.18□□□□□ -0.3
CKS1B-206ENST00000474215 IMMTQ16891 758 aaKnown RBP13.18□□□□□ -0.3
CKS1B-206ENST00000474215 TRPV1Q8NER1 839 aa13.18□□□□□ -0.3
CKS1B-206ENST00000474215 DCAF4Q8WV16 495 aa13.18□□□□□ -0.3
CKS1B-206ENST00000474215 DDX11Q96FC9 970 aa13.18□□□□□ -0.3
CKS1B-206ENST00000474215 IL25Q9H293 177 aa13.18□□□□□ -0.3
CKS1B-206ENST00000474215 FBXO40Q9UH90 709 aa13.18□□□□□ -0.3
CKS1B-206ENST00000474215 DDX20Q9UHI6 824 aaKnown RBP13.18□□□□□ -0.3
CKS1B-206ENST00000474215 MTMR7Q9Y216 660 aa13.18□□□□□ -0.3
CKS1B-206ENST00000474215 ZNF236Q9UL36 1845 aa13.18□□□□□ -0.3
CKS1B-206ENST00000474215 NEDD4P46934 1319 aa13.17□□□□□ -0.3
CKS1B-206ENST00000474215 RAD50Q92878 1312 aa13.17□□□□□ -0.3
CKS1B-206ENST00000474215 CCDC178Q5BJE1 867 aa13.17□□□□□ -0.3
CKS1B-206ENST00000474215 PRAMEF19Q5SWL8 479 aa13.17□□□□□ -0.3
CKS1B-206ENST00000474215 DGKHQ86XP1 1220 aa13.17□□□□□ -0.3
CKS1B-206ENST00000474215 CHST13Q8NET6 341 aa13.17□□□□□ -0.3
CKS1B-206ENST00000474215 TINF2Q9BSI4 451 aa13.17□□□□□ -0.3
CKS1B-206ENST00000474215 PRR12Q9ULL5 1215 aa13.17□□□□□ -0.3
CKS1B-206ENST00000474215 NR2E3Q9Y5X4 410 aa13.17□□□□□ -0.3
CKS1B-206ENST00000474215 ZNF536O15090 1300 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 DNAJC25-GNG10A0A024R161 153 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 SEPT4O43236 478 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 EVI5O60447 810 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 KDM4AO75164 1064 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 CCDC96Q2M329 555 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 BTNL9Q6UXG8 535 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.16□□□□□ -0.3
CKS1B-206ENST00000474215 RASGRP2Q7LDG7 609 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 IQCA1Q86XH1 822 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 ANKRD35Q8N283 1001 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 AGBL1Q96MI9 1066 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 ZKSCAN3Q9BRR0 538 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 KRT23Q9C075 422 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 C11orf49Q9H6J7 331 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 ZSWIM5Q9P217 1185 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 NRBP1Q9UHY1 535 aa13.16□□□□□ -0.3
CKS1B-206ENST00000474215 COL11A1P12107 1806 aaPredicted RBP13.16□□□□□ -0.3
CKS1B-206ENST00000474215 B4E1Z4 1266 aa13.15□□□□□ -0.3
CKS1B-206ENST00000474215 COL6A1P12109 1028 aa13.15□□□□□ -0.3
CKS1B-206ENST00000474215 SLC16A2P36021 539 aa13.15□□□□□ -0.3
CKS1B-206ENST00000474215 SNAP25P60880 206 aa13.15□□□□□ -0.3
CKS1B-206ENST00000474215 TKFCQ3LXA3 575 aa13.15□□□□□ -0.3
CKS1B-206ENST00000474215 TTBK2Q6IQ55 1244 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms