RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SH3D21A4FU49 640 aa4.32□□□□□ -1.72
CCDC39-203ENST00000473854 CARNS1A5YM72 827 aa4.32□□□□□ -1.72
CCDC39-203ENST00000473854 NUDT19A8MXV4 375 aa4.32□□□□□ -1.72
CCDC39-203ENST00000473854 C6P13671 934 aa4.32□□□□□ -1.72
CCDC39-203ENST00000473854 ZNF20P17024 532 aa4.32□□□□□ -1.72
CCDC39-203ENST00000473854 TACR2P21452 398 aa4.32□□□□□ -1.72
CCDC39-203ENST00000473854 HSF5Q4G112 596 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-203ENST00000473854 USHBP1Q8N6Y0 703 aa4.32□□□□□ -1.72
CCDC39-203ENST00000473854 TCTN2Q96GX1 697 aa4.32□□□□□ -1.72
CCDC39-203ENST00000473854 PLCD4Q9BRC7 762 aa4.32□□□□□ -1.72
CCDC39-203ENST00000473854 PCDHB5Q9Y5E4 795 aa4.32□□□□□ -1.72
CCDC39-203ENST00000473854 A0A1W2PQ45 241 aaPredicted RBP4.31□□□□□ -1.72
CCDC39-203ENST00000473854 A0A1W2PQY0 241 aa4.31□□□□□ -1.72
CCDC39-203ENST00000473854 TMEM82A0PJX8 343 aa4.31□□□□□ -1.72
CCDC39-203ENST00000473854 FADS2P1A8MWK0 482 aa4.31□□□□□ -1.72
CCDC39-203ENST00000473854 BPNT1O95861 308 aa4.31□□□□□ -1.72
CCDC39-203ENST00000473854 CNR2P34972 360 aa4.31□□□□□ -1.72
CCDC39-203ENST00000473854 MAPK8P45983 427 aa4.31□□□□□ -1.72
CCDC39-203ENST00000473854 VWA3BQ502W6 1294 aa4.31□□□□□ -1.72
CCDC39-203ENST00000473854 SAPCD2Q86UD0 394 aa4.31□□□□□ -1.72
CCDC39-203ENST00000473854 SPATA25Q9BR10 227 aa4.31□□□□□ -1.72
CCDC39-203ENST00000473854 FAN1Q9Y2M0 1017 aa4.31□□□□□ -1.72
CCDC39-203ENST00000473854 PMF1-BGLAPU3KQ54 211 aa4.31□□□□□ -1.72
CCDC39-203ENST00000473854 SYPP08247 313 aa4.3□□□□□ -1.72
CCDC39-203ENST00000473854 PRKCAP17252 672 aa4.3□□□□□ -1.72
CCDC39-203ENST00000473854 MAPK1P28482 360 aa4.3□□□□□ -1.72
CCDC39-203ENST00000473854 LIMS1P48059 325 aa4.3□□□□□ -1.72
CCDC39-203ENST00000473854 LIG3P49916 1009 aa4.3□□□□□ -1.72
CCDC39-203ENST00000473854 NCKAP1LP55160 1127 aa4.3□□□□□ -1.72
CCDC39-203ENST00000473854 PLEKHN1Q494U1 663 aaPredicted RBP4.3□□□□□ -1.72
CCDC39-203ENST00000473854 RPTNQ6XPR3 784 aa4.3□□□□□ -1.72
CCDC39-203ENST00000473854 CCDC84Q86UT8 332 aaPredicted RBP4.3□□□□□ -1.72
CCDC39-203ENST00000473854 CCDC82Q8N4S0 544 aa4.3□□□□□ -1.72
CCDC39-203ENST00000473854 FNIP1Q8TF40 1166 aa4.3□□□□□ -1.72
CCDC39-203ENST00000473854 LOXL4Q96JB6 756 aa4.3□□□□□ -1.72
CCDC39-203ENST00000473854 RBM15Q96T37 977 aaKnown RBP eCLIP4.3□□□□□ -1.72
CCDC39-203ENST00000473854 LNPKQ9C0E8 428 aa4.3□□□□□ -1.72
CCDC39-203ENST00000473854 RNF38Q9H0F5 515 aa4.3□□□□□ -1.72
CCDC39-203ENST00000473854 ACSL6Q9UKU0 697 aa4.3□□□□□ -1.72
CCDC39-203ENST00000473854 GPR55Q9Y2T6 319 aaPredicted RBP4.3□□□□□ -1.72
CCDC39-203ENST00000473854 SOWAHDA6NJG2 315 aa4.29□□□□□ -1.72
CCDC39-203ENST00000473854 UPK3BL1B0FP48 263 aa4.29□□□□□ -1.72
CCDC39-203ENST00000473854 UPK3BL2E5RIL1 263 aa4.29□□□□□ -1.72
CCDC39-203ENST00000473854 RBAK-RBAKDNI3L0D1 243 aa4.29□□□□□ -1.72
CCDC39-203ENST00000473854 FZD7O75084 574 aa4.29□□□□□ -1.72
CCDC39-203ENST00000473854 ZNF200P98182 395 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-203ENST00000473854 FMR1Q06787 632 aaKnown RBP eCLIP4.29□□□□□ -1.72
CCDC39-203ENST00000473854 PDE4CQ08493 712 aa4.29□□□□□ -1.72
CCDC39-203ENST00000473854 BBS9Q3SYG4 887 aa4.29□□□□□ -1.72
CCDC39-203ENST00000473854 ZSCAN29Q8IWY8 852 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-203ENST00000473854 PHACTR4Q8IZ21 702 aa4.29□□□□□ -1.72
CCDC39-203ENST00000473854 CHST13Q8NET6 341 aa4.29□□□□□ -1.72
CCDC39-203ENST00000473854 NUP43Q8NFH3 380 aa4.29□□□□□ -1.72
CCDC39-203ENST00000473854 DVL3Q92997 716 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-203ENST00000473854 BIN2Q9UBW5 565 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-203ENST00000473854 NOBOXO60393 691 aa4.28□□□□□ -1.72
CCDC39-203ENST00000473854 FKTNO75072 461 aa4.28□□□□□ -1.72
CCDC39-203ENST00000473854 GBP1P32455 592 aa4.28□□□□□ -1.72
CCDC39-203ENST00000473854 HTRA3P83110 453 aa4.28□□□□□ -1.72
CCDC39-203ENST00000473854 MLECQ14165 292 aa4.28□□□□□ -1.72
CCDC39-203ENST00000473854 SLCO6A1Q86UG4 719 aa4.28□□□□□ -1.72
CCDC39-203ENST00000473854 AEBP1Q8IUX7 1158 aa4.28□□□□□ -1.72
CCDC39-203ENST00000473854 CARFQ8N187 725 aa4.28□□□□□ -1.72
CCDC39-203ENST00000473854 C8orf49Q96NF6 230 aa4.28□□□□□ -1.72
CCDC39-203ENST00000473854 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
CCDC39-203ENST00000473854 SCAND2PQ9GZW5 306 aaPredicted RBP4.28□□□□□ -1.72
CCDC39-203ENST00000473854 A0A1W2PQ27 194 aa4.27□□□□□ -1.73
CCDC39-203ENST00000473854 A0A1W2PQ64 194 aa4.27□□□□□ -1.73
CCDC39-203ENST00000473854 A0A1W2PQC6 194 aa4.27□□□□□ -1.73
CCDC39-203ENST00000473854 A0A1W2PQD8 194 aa4.27□□□□□ -1.73
CCDC39-203ENST00000473854 PLATP00750 562 aa4.27□□□□□ -1.73
CCDC39-203ENST00000473854 EIF4BP23588 611 aaKnown RBP4.27□□□□□ -1.73
CCDC39-203ENST00000473854 ACVRL1P37023 503 aa4.27□□□□□ -1.73
CCDC39-203ENST00000473854 FOXO4P98177 505 aa4.27□□□□□ -1.73
CCDC39-203ENST00000473854 RAD51AP2Q09MP3 1159 aa4.27□□□□□ -1.73
CCDC39-203ENST00000473854 DDX1Q92499 740 aaKnown RBP4.27□□□□□ -1.73
CCDC39-203ENST00000473854 KISS1RQ969F8 398 aaPredicted RBP4.27□□□□□ -1.73
CCDC39-203ENST00000473854 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.27□□□□□ -1.73
CCDC39-203ENST00000473854 KLHL3Q9UH77 587 aa4.27□□□□□ -1.73
CCDC39-203ENST00000473854 CORINQ9Y5Q5 1042 aa4.27□□□□□ -1.73
CCDC39-203ENST00000473854 PRR36Q9H6K5 1346 aa4.26□□□□□ -1.73
CCDC39-203ENST00000473854 ARID3CA6NKF2 412 aa4.26□□□□□ -1.73
CCDC39-203ENST00000473854 SRGAP3O43295 1099 aa4.26□□□□□ -1.73
CCDC39-203ENST00000473854 SLPIP03973 132 aa4.26□□□□□ -1.73
CCDC39-203ENST00000473854 CYBBP04839 570 aa4.26□□□□□ -1.73
CCDC39-203ENST00000473854 TFE3P19532 575 aaPredicted RBP4.26□□□□□ -1.73
CCDC39-203ENST00000473854 CRB2Q5IJ48 1285 aa4.26□□□□□ -1.73
CCDC39-203ENST00000473854 CRIP3Q6Q6R5 217 aa4.26□□□□□ -1.73
CCDC39-203ENST00000473854 PAQR3Q6TCH7 311 aa4.26□□□□□ -1.73
CCDC39-203ENST00000473854 JARID2Q92833 1246 aaPredicted RBP4.26□□□□□ -1.73
CCDC39-203ENST00000473854 CDK5RAP1Q96SZ6 601 aaKnown RBP4.26□□□□□ -1.73
CCDC39-203ENST00000473854 NTMQ9P121 344 aa4.26□□□□□ -1.73
CCDC39-203ENST00000473854 REV1Q9UBZ9 1251 aa4.26□□□□□ -1.73
CCDC39-203ENST00000473854 DUSP10Q9Y6W6 482 aa4.26□□□□□ -1.73
CCDC39-203ENST00000473854 A0A1B0GTL3 188 aa4.25□□□□□ -1.73
CCDC39-203ENST00000473854 A0A1W2PQJ5 194 aa4.25□□□□□ -1.73
CCDC39-203ENST00000473854 RGS13O14921 159 aa4.25□□□□□ -1.73
CCDC39-203ENST00000473854 SIGLEC6O43699 453 aa4.25□□□□□ -1.73
CCDC39-203ENST00000473854 PLA2G1BP04054 148 aaKnown RBP4.25□□□□□ -1.73
CCDC39-203ENST00000473854 NCAM1P13591 858 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms