RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 MKNK2Q9HBH9 465 aa9.02□□□□□ -0.97
SEC22A-204ENST00000473494 CWC22Q9HCG8 908 aaKnown RBP9.02□□□□□ -0.97
SEC22A-204ENST00000473494 MRPS23Q9Y3D9 190 aaKnown RBP9.02□□□□□ -0.97
SEC22A-204ENST00000473494 TRBV23-1A0A0A0MS06 115 aa9.01□□□□□ -0.97
SEC22A-204ENST00000473494 SHISA3A0PJX4 238 aa9.01□□□□□ -0.97
SEC22A-204ENST00000473494 GSC2O15499 205 aa9.01□□□□□ -0.97
SEC22A-204ENST00000473494 H2AFB1P0C5Y9 115 aa9.01□□□□□ -0.97
SEC22A-204ENST00000473494 H2AFB2P0C5Z0 115 aa9.01□□□□□ -0.97
SEC22A-204ENST00000473494 SRFP11831 508 aa9.01□□□□□ -0.97
SEC22A-204ENST00000473494 GRIA2P42262 883 aa9.01□□□□□ -0.97
SEC22A-204ENST00000473494 RNF187Q5TA31 235 aaPredicted RBP9.01□□□□□ -0.97
SEC22A-204ENST00000473494 ENOX1Q8TC92 643 aaKnown RBP9.01□□□□□ -0.97
SEC22A-204ENST00000473494 BTN2A2Q8WVV5 523 aa9.01□□□□□ -0.97
SEC22A-204ENST00000473494 OSBP2Q969R2 916 aa9.01□□□□□ -0.97
SEC22A-204ENST00000473494 DHRS4Q9BTZ2 278 aa9.01□□□□□ -0.97
SEC22A-204ENST00000473494 NCOA5Q9HCD5 579 aaKnown RBP9.01□□□□□ -0.97
SEC22A-204ENST00000473494 CHST7Q9NS84 486 aa9.01□□□□□ -0.97
SEC22A-204ENST00000473494 SF3B6Q9Y3B4 125 aaKnown RBP9.01□□□□□ -0.97
SEC22A-204ENST00000473494 CD2APQ9Y5K6 639 aa9.01□□□□□ -0.97
SEC22A-204ENST00000473494 U3KQE9 123 aa9.01□□□□□ -0.97
SEC22A-204ENST00000473494 KCNH1O95259 989 aa9□□□□□ -0.97
SEC22A-204ENST00000473494 PABPC1P11940 636 aaKnown RBP9□□□□□ -0.97
SEC22A-204ENST00000473494 HSP90B1P14625 803 aaKnown RBP9□□□□□ -0.97
SEC22A-204ENST00000473494 OXCT1P55809 520 aa9□□□□□ -0.97
SEC22A-204ENST00000473494 SUMO1P63165 101 aaKnown RBP9□□□□□ -0.97
SEC22A-204ENST00000473494 FAM209AQ5JX71 171 aa9□□□□□ -0.97
SEC22A-204ENST00000473494 GTF2IRD2BQ6EKJ0 949 aa9□□□□□ -0.97
SEC22A-204ENST00000473494 GTF2IRD2Q86UP8 949 aa9□□□□□ -0.97
SEC22A-204ENST00000473494 FBXL6Q8N531 539 aa9□□□□□ -0.97
SEC22A-204ENST00000473494 CDC6Q99741 560 aa9□□□□□ -0.97
SEC22A-204ENST00000473494 DSCC1Q9BVC3 393 aa9□□□□□ -0.97
SEC22A-204ENST00000473494 ASCC2Q9H1I8 757 aaPredicted RBP9□□□□□ -0.97
SEC22A-204ENST00000473494 NKX2-4Q9H2Z4 354 aa9□□□□□ -0.97
SEC22A-204ENST00000473494 DNAJC25-GNG10A0A024R161 153 aa8.99□□□□□ -0.97
SEC22A-204ENST00000473494 H0Y8X5 98 aa8.99□□□□□ -0.97
SEC22A-204ENST00000473494 PPP1R12AO14974 1030 aaPredicted RBP8.99□□□□□ -0.97
SEC22A-204ENST00000473494 GSNP06396 782 aa8.99□□□□□ -0.97
SEC22A-204ENST00000473494 L1CAMP32004 1257 aa8.99□□□□□ -0.97
SEC22A-204ENST00000473494 CTSKP43235 329 aa8.99□□□□□ -0.97
SEC22A-204ENST00000473494 GYS2P54840 703 aa8.99□□□□□ -0.97
SEC22A-204ENST00000473494 GFRA1P56159 465 aa8.99□□□□□ -0.97
SEC22A-204ENST00000473494 MAP4K2Q12851 820 aa8.99□□□□□ -0.97
SEC22A-204ENST00000473494 DALRD3Q5D0E6 543 aaKnown RBP8.99□□□□□ -0.97
SEC22A-204ENST00000473494 SCUBE1Q8IWY4 988 aa8.99□□□□□ -0.97
SEC22A-204ENST00000473494 DAGLBQ8NCG7 672 aa8.99□□□□□ -0.97
SEC22A-204ENST00000473494 ZDHHC15Q96MV8 337 aa8.99□□□□□ -0.97
SEC22A-204ENST00000473494 IER2Q9BTL4 223 aa8.99□□□□□ -0.97
SEC22A-204ENST00000473494 MRPL4Q9BYD3 311 aaKnown RBP8.99□□□□□ -0.97
SEC22A-204ENST00000473494 ST14Q9Y5Y6 855 aa8.99□□□□□ -0.97
SEC22A-204ENST00000473494 PLD2O14939 933 aa8.98□□□□□ -0.97
SEC22A-204ENST00000473494 RFPL3O75679 317 aa8.98□□□□□ -0.97
SEC22A-204ENST00000473494 IGLV1-40P01703 118 aa8.98□□□□□ -0.97
SEC22A-204ENST00000473494 SCG5P05408 212 aa8.98□□□□□ -0.97
SEC22A-204ENST00000473494 CEACAM5P06731 702 aa8.98□□□□□ -0.97
SEC22A-204ENST00000473494 AMPD2Q01433 879 aa8.98□□□□□ -0.97
SEC22A-204ENST00000473494 PPP2R5DQ14738 602 aa8.98□□□□□ -0.97
SEC22A-204ENST00000473494 FNDC3BQ53EP0 1204 aaKnown RBP8.98□□□□□ -0.97
SEC22A-204ENST00000473494 SPACA3Q8IXA5 215 aa8.98□□□□□ -0.97
SEC22A-204ENST00000473494 GPATCH3Q96I76 525 aa8.98□□□□□ -0.97
SEC22A-204ENST00000473494 BRINP2Q9C0B6 783 aa8.98□□□□□ -0.97
SEC22A-204ENST00000473494 PRODHO43272 600 aa8.97□□□□□ -0.97
SEC22A-204ENST00000473494 FSTP19883 344 aa8.97□□□□□ -0.97
SEC22A-204ENST00000473494 CLCN7P51798 805 aa8.97□□□□□ -0.97
SEC22A-204ENST00000473494 NKPD1Q17RQ9 610 aa8.97□□□□□ -0.97
SEC22A-204ENST00000473494 TRIM61Q5EBN2 209 aa8.97□□□□□ -0.97
SEC22A-204ENST00000473494 DUSP27Q5VZP5 1158 aa8.97□□□□□ -0.97
SEC22A-204ENST00000473494 CRTC3Q6UUV7 619 aa8.97□□□□□ -0.97
SEC22A-204ENST00000473494 NSMFQ6X4W1 530 aa8.97□□□□□ -0.97
SEC22A-204ENST00000473494 ZNF655Q8N720 491 aaPredicted RBP8.97□□□□□ -0.97
SEC22A-204ENST00000473494 SHKBP1Q8TBC3 707 aa8.97□□□□□ -0.97
SEC22A-204ENST00000473494 NINJ1Q92982 152 aa8.97□□□□□ -0.97
SEC22A-204ENST00000473494 C1orf159Q96HA4 380 aa8.97□□□□□ -0.97
SEC22A-204ENST00000473494 IPO9Q96P70 1041 aaKnown RBP8.97□□□□□ -0.97
SEC22A-204ENST00000473494 DUSP15Q9H1R2 295 aaPredicted RBP8.97□□□□□ -0.97
SEC22A-204ENST00000473494 MINPP1Q9UNW1 487 aa8.97□□□□□ -0.97
SEC22A-204ENST00000473494 FAM155AB1AL88 458 aaPredicted RBP8.96□□□□□ -0.98
SEC22A-204ENST00000473494 DLX3O60479 287 aa8.96□□□□□ -0.98
SEC22A-204ENST00000473494 DNAJC6O75061 913 aa8.96□□□□□ -0.98
SEC22A-204ENST00000473494 GDF11O95390 407 aa8.96□□□□□ -0.98
SEC22A-204ENST00000473494 C6orf222P0C671 652 aaPredicted RBP8.96□□□□□ -0.98
SEC22A-204ENST00000473494 ITIH2P19823 946 aa8.96□□□□□ -0.98
SEC22A-204ENST00000473494 HOXC12P31275 282 aa8.96□□□□□ -0.98
SEC22A-204ENST00000473494 PTPROQ16827 1216 aa8.96□□□□□ -0.98
SEC22A-204ENST00000473494 FILIP1Q7Z7B0 1213 aa8.96□□□□□ -0.98
SEC22A-204ENST00000473494 FAM181AQ8N9Y4 354 aa8.96□□□□□ -0.98
SEC22A-204ENST00000473494 KCTD13Q8WZ19 329 aa8.96□□□□□ -0.98
SEC22A-204ENST00000473494 MFSD3Q96ES6 412 aa8.96□□□□□ -0.98
SEC22A-204ENST00000473494 CCDC140Q96MF4 163 aa8.96□□□□□ -0.98
SEC22A-204ENST00000473494 OSBPL1AQ9BXW6 950 aa8.96□□□□□ -0.98
SEC22A-204ENST00000473494 TRIT1Q9H3H1 467 aaKnown RBP8.96□□□□□ -0.98
SEC22A-204ENST00000473494 SPC25Q9HBM1 224 aa8.96□□□□□ -0.98
SEC22A-204ENST00000473494 GPR55Q9Y2T6 319 aaPredicted RBP8.96□□□□□ -0.98
SEC22A-204ENST00000473494 KCNQ2O43526 872 aa8.95□□□□□ -0.98
SEC22A-204ENST00000473494 PROCP04070 461 aa8.95□□□□□ -0.98
SEC22A-204ENST00000473494 HMGB1P09429 215 aaKnown RBP8.95□□□□□ -0.98
SEC22A-204ENST00000473494 BMP8BP34820 402 aa8.95□□□□□ -0.98
SEC22A-204ENST00000473494 POU4F1Q01851 419 aa8.95□□□□□ -0.98
SEC22A-204ENST00000473494 CYP4F3Q08477 520 aa8.95□□□□□ -0.98
SEC22A-204ENST00000473494 PABPC4Q13310 644 aaKnown RBP eCLIP8.95□□□□□ -0.98
SEC22A-204ENST00000473494 CBX2Q14781 532 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms