RNA–Protein interactions for RNA: ENST00000473230.1

RCL1-209, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 3

Gene RCL1, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-209ENST00000473230 ANKRD13AQ8IZ07 590 aa8.31□□□□□ -1.08
RCL1-209ENST00000473230 GPT2Q8TD30 523 aa8.31□□□□□ -1.08
RCL1-209ENST00000473230 ANP32BQ92688 251 aaKnown RBP8.31□□□□□ -1.08
RCL1-209ENST00000473230 EDC3Q96F86 508 aaKnown RBP8.31□□□□□ -1.08
RCL1-209ENST00000473230 ZDHHC15Q96MV8 337 aa8.31□□□□□ -1.08
RCL1-209ENST00000473230 NEUROD6Q96NK8 337 aa8.31□□□□□ -1.08
RCL1-209ENST00000473230 CSRNP1Q96S65 589 aa8.31□□□□□ -1.08
RCL1-209ENST00000473230 TDRD3Q9H7E2 651 aaKnown RBP8.31□□□□□ -1.08
RCL1-209ENST00000473230 RNF186Q9NXI6 227 aa8.31□□□□□ -1.08
RCL1-209ENST00000473230 PSME4Q14997 1843 aa8.31□□□□□ -1.08
RCL1-209ENST00000473230 MANSC4A6NHS7 340 aaPredicted RBP8.3□□□□□ -1.08
RCL1-209ENST00000473230 TCP10L2B9ZVM9 353 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 STX6O43752 255 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 LARGE1O95461 756 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 RPS6KB1P23443 525 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 GJB2P29033 226 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 MCMDC2Q4G0Z9 681 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 FKBP1CQ5VVH2 108 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 OTUD7BQ6GQQ9 843 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 ZNF589Q86UQ0 364 aaPredicted RBP8.3□□□□□ -1.08
RCL1-209ENST00000473230 FAM83AQ86UY5 434 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 MEIOBQ8N635 442 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 KBTBD3Q8NAB2 608 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 LRRN4Q8WUT4 740 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 SYAP1Q96A49 352 aaPredicted RBP8.3□□□□□ -1.08
RCL1-209ENST00000473230 CHAMP1Q96JM3 812 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 ZIC5Q96T25 663 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 ATP6V1DQ9Y5K8 247 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 CSADQ9Y600 493 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 LAMA4Q16363 1823 aa8.3□□□□□ -1.08
RCL1-209ENST00000473230 PDS5AQ29RF7 1337 aaKnown RBP8.29□□□□□ -1.08
RCL1-209ENST00000473230 SALL1Q9NSC2 1324 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 MYH7P12883 1935 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 A0A1B0GUL7 405 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 GOLIM4O00461 696 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 WDHD1O75717 1129 aaPredicted RBP8.29□□□□□ -1.08
RCL1-209ENST00000473230 F13A1P00488 732 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 TM4SF4P48230 202 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 NASPP49321 788 aaPredicted RBP8.29□□□□□ -1.08
RCL1-209ENST00000473230 PTSQ03393 145 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 TSGA10IPQ3SY00 556 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 NBPF12Q5TAG4 269 aaPredicted RBP8.29□□□□□ -1.08
RCL1-209ENST00000473230 DCAF15Q66K64 600 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 CCDC102BQ68D86 513 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 TICAM2Q86XR7 235 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 DZIP1Q86YF9 867 aaKnown RBP8.29□□□□□ -1.08
RCL1-209ENST00000473230 ABHD8Q96I13 439 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 ALDH8A1Q9H2A2 487 aaPredicted RBP8.29□□□□□ -1.08
RCL1-209ENST00000473230 HELLSQ9NRZ9 838 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 PAG1Q9NWQ8 432 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 PCDHAC2Q9Y5I4 1007 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 NDUFB9Q9Y6M9 179 aa8.29□□□□□ -1.08
RCL1-209ENST00000473230 FIGNL2A6NMB9 653 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 SYT1P21579 422 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 TIMM10P62072 90 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 FOXK2Q01167 660 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 CCDC173Q0VFZ6 552 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 DGKZQ13574 1117 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 ME3Q16798 604 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 LRRFIP1Q32MZ4 808 aaKnown RBP8.28□□□□□ -1.08
RCL1-209ENST00000473230 FOXD4L6Q3SYB3 417 aaPredicted RBP8.28□□□□□ -1.08
RCL1-209ENST00000473230 XP32Q5T750 250 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 APOBEC3HQ6NTF7 200 aaKnown RBP8.28□□□□□ -1.08
RCL1-209ENST00000473230 KANK3Q6NY19 840 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 FOXD4L3Q6VB84 417 aaPredicted RBP8.28□□□□□ -1.08
RCL1-209ENST00000473230 CCDC129Q6ZRS4 1044 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 NECAB1Q8N987 351 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 TMEM87AQ8NBN3 555 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 ARMC2Q8NEN0 867 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 WHAMMQ8TF30 809 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.28□□□□□ -1.08
RCL1-209ENST00000473230 TRIM44Q96DX7 344 aaPredicted RBP8.28□□□□□ -1.08
RCL1-209ENST00000473230 XAGE2Q96GT9 111 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 TMEM39BQ9GZU3 492 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 TMEM63CQ9P1W3 806 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 ABCF2Q9UG63 623 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 TPCN1Q9ULQ1 816 aa8.28□□□□□ -1.08
RCL1-209ENST00000473230 VPS37CA5D8V6 355 aaPredicted RBP8.27□□□□□ -1.09
RCL1-209ENST00000473230 TTLL8A6PVC2 850 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 RNF113AO15541 343 aaKnown RBP8.27□□□□□ -1.09
RCL1-209ENST00000473230 USP2O75604 605 aaPredicted RBP8.27□□□□□ -1.09
RCL1-209ENST00000473230 UQCRFS1P1P0C7P4 283 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 PDIA4P13667 645 aaKnown RBP8.27□□□□□ -1.09
RCL1-209ENST00000473230 PDCP20941 246 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 PRDX5P30044 214 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 GRM5P41594 1212 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 PHKA1P46020 1223 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 GSTO1P78417 241 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 ST3GAL1Q11201 340 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 GRIK5Q16478 980 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 TMEM259Q4ZIN3 620 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 NOM1Q5C9Z4 860 aaKnown RBP8.27□□□□□ -1.09
RCL1-209ENST00000473230 RNFT1Q5M7Z0 435 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 CCDC158Q5M9N0 1113 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 TTC39AQ5SRH9 613 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 ZMYM1Q5SVZ6 1142 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 LRSAM1Q6UWE0 723 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 WNK4Q96J92 1243 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 NEK1Q96PY6 1258 aa8.27□□□□□ -1.09
RCL1-209ENST00000473230 NOL10Q9BSC4 688 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms