RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 CTNNA3Q9UI47 895 aa18.41■□□□□ 0.54
MRPL55-226ENST00000473066 ZNF214Q9UL59 606 aaPredicted RBP18.41■□□□□ 0.54
MRPL55-226ENST00000473066 MTMR7Q9Y216 660 aa18.41■□□□□ 0.54
MRPL55-226ENST00000473066 FGRP09769 529 aa18.4■□□□□ 0.54
MRPL55-226ENST00000473066 FDX1P10109 184 aa18.4■□□□□ 0.54
MRPL55-226ENST00000473066 SLC4A3P48751 1232 aa18.4■□□□□ 0.54
MRPL55-226ENST00000473066 NT5C2P49902 561 aa18.4■□□□□ 0.54
MRPL55-226ENST00000473066 CCDC96Q2M329 555 aa18.4■□□□□ 0.54
MRPL55-226ENST00000473066 ANKLE1Q8NAG6 615 aa18.4■□□□□ 0.54
MRPL55-226ENST00000473066 NPLOC4Q8TAT6 608 aa18.4■□□□□ 0.54
MRPL55-226ENST00000473066 CHURC1Q8WUH1 139 aa18.4■□□□□ 0.54
MRPL55-226ENST00000473066 ESR2Q92731 530 aa18.4■□□□□ 0.54
MRPL55-226ENST00000473066 CRISPLD2Q9H0B8 497 aa18.4■□□□□ 0.54
MRPL55-226ENST00000473066 TMEM232C9JQI7 657 aa18.39■□□□□ 0.53
MRPL55-226ENST00000473066 NMT2O60551 498 aa18.39■□□□□ 0.53
MRPL55-226ENST00000473066 IMMTQ16891 758 aaKnown RBP18.39■□□□□ 0.53
MRPL55-226ENST00000473066 TBC1D10CQ8IV04 446 aa18.39■□□□□ 0.53
MRPL55-226ENST00000473066 CPXCR1Q8N123 301 aa18.39■□□□□ 0.53
MRPL55-226ENST00000473066 REPS2Q8NFH8 660 aa18.39■□□□□ 0.53
MRPL55-226ENST00000473066 TOP1P11387 765 aaKnown RBP18.38■□□□□ 0.53
MRPL55-226ENST00000473066 MCCP23508 829 aa18.38■□□□□ 0.53
MRPL55-226ENST00000473066 CNGA1P29973 690 aa18.38■□□□□ 0.53
MRPL55-226ENST00000473066 OLFML2BQ68BL8 750 aa18.38■□□□□ 0.53
MRPL55-226ENST00000473066 DCAF4Q8WV16 495 aa18.38■□□□□ 0.53
MRPL55-226ENST00000473066 DPF3Q92784 378 aa18.38■□□□□ 0.53
MRPL55-226ENST00000473066 CHMP4CQ96CF2 233 aa18.38■□□□□ 0.53
MRPL55-226ENST00000473066 IL17RBQ9NRM6 502 aa18.38■□□□□ 0.53
MRPL55-226ENST00000473066 FLRT1Q9NZU1 646 aa18.38■□□□□ 0.53
MRPL55-226ENST00000473066 TACC3Q9Y6A5 838 aa18.38■□□□□ 0.53
MRPL55-226ENST00000473066 ALPK3Q96L96 1907 aa18.37■□□□□ 0.53
MRPL55-226ENST00000473066 MSCO60682 206 aa18.37■□□□□ 0.53
MRPL55-226ENST00000473066 CCND3P30281 292 aaPredicted RBP18.37■□□□□ 0.53
MRPL55-226ENST00000473066 OAZ1P54368 228 aa18.37■□□□□ 0.53
MRPL55-226ENST00000473066 NECAB2Q7Z6G3 386 aa18.37■□□□□ 0.53
MRPL55-226ENST00000473066 IQCA1Q86XH1 822 aa18.37■□□□□ 0.53
MRPL55-226ENST00000473066 SLC38A10Q9HBR0 1119 aa18.37■□□□□ 0.53
MRPL55-226ENST00000473066 RAVER2Q9HCJ3 691 aaKnown RBP18.37■□□□□ 0.53
MRPL55-226ENST00000473066 TCP11L1Q9NUJ3 509 aa18.37■□□□□ 0.53
MRPL55-226ENST00000473066 FBXO40Q9UH90 709 aa18.37■□□□□ 0.53
MRPL55-226ENST00000473066 NEDD4P46934 1319 aa18.37■□□□□ 0.53
MRPL55-226ENST00000473066 MYH6P13533 1939 aa18.37■□□□□ 0.53
MRPL55-226ENST00000473066 MCM3APO60318 1980 aa18.37■□□□□ 0.53
MRPL55-226ENST00000473066 BRCA2P51587 3418 aa18.36■□□□□ 0.53
MRPL55-226ENST00000473066 ATP2A1O14983 1001 aa18.36■□□□□ 0.53
MRPL55-226ENST00000473066 CYP2C19P33261 490 aa18.36■□□□□ 0.53
MRPL55-226ENST00000473066 CCDC178Q5BJE1 867 aa18.36■□□□□ 0.53
MRPL55-226ENST00000473066 RCSD1Q6JBY9 416 aa18.36■□□□□ 0.53
MRPL55-226ENST00000473066 KCTD1Q719H9 257 aa18.36■□□□□ 0.53
MRPL55-226ENST00000473066 CENPQQ7L2Z9 268 aaPredicted RBP18.36■□□□□ 0.53
MRPL55-226ENST00000473066 DDX11Q96FC9 970 aa18.36■□□□□ 0.53
MRPL55-226ENST00000473066 NBPF3Q9H094 633 aa18.36■□□□□ 0.53
MRPL55-226ENST00000473066 COBLO75128 1261 aa18.35■□□□□ 0.53
MRPL55-226ENST00000473066 UBE2Q1Q7Z7E8 422 aa18.35■□□□□ 0.53
MRPL55-226ENST00000473066 PAWRQ96IZ0 340 aaKnown RBP18.35■□□□□ 0.53
MRPL55-226ENST00000473066 MAML3Q96JK9 1138 aa18.35■□□□□ 0.53
MRPL55-226ENST00000473066 TMEM47Q9BQJ4 181 aa18.35■□□□□ 0.53
MRPL55-226ENST00000473066 KRT23Q9C075 422 aa18.35■□□□□ 0.53
MRPL55-226ENST00000473066 CNNM2Q9H8M5 875 aa18.35■□□□□ 0.53
MRPL55-226ENST00000473066 OGDHLQ9ULD0 1010 aa18.35■□□□□ 0.53
MRPL55-226ENST00000473066 PLA2G6O60733 806 aa18.34■□□□□ 0.53
MRPL55-226ENST00000473066 PGK2P07205 417 aa18.34■□□□□ 0.53
MRPL55-226ENST00000473066 CHMLP26374 656 aa18.34■□□□□ 0.53
MRPL55-226ENST00000473066 NOVP48745 357 aa18.34■□□□□ 0.53
MRPL55-226ENST00000473066 CHST13Q8NET6 341 aa18.34■□□□□ 0.53
MRPL55-226ENST00000473066 TTC14Q96N46 770 aa18.34■□□□□ 0.53
MRPL55-226ENST00000473066 DDX20Q9UHI6 824 aaKnown RBP18.34■□□□□ 0.53
MRPL55-226ENST00000473066 NR2E3Q9Y5X4 410 aa18.34■□□□□ 0.53
MRPL55-226ENST00000473066 B4E1Z4 1266 aa18.33■□□□□ 0.52
MRPL55-226ENST00000473066 KDM4AO75164 1064 aa18.33■□□□□ 0.52
MRPL55-226ENST00000473066 CYBAP13498 195 aa18.33■□□□□ 0.52
MRPL55-226ENST00000473066 ANKRD35Q8N283 1001 aa18.33■□□□□ 0.52
MRPL55-226ENST00000473066 DIS3LQ8TF46 1054 aaKnown RBP18.33■□□□□ 0.52
MRPL55-226ENST00000473066 HOMER2Q9NSB8 354 aa18.33■□□□□ 0.52
MRPL55-226ENST00000473066 DIS3Q9Y2L1 958 aaKnown RBP18.33■□□□□ 0.52
MRPL55-226ENST00000473066 SMCHD1A6NHR9 2005 aa18.33■□□□□ 0.52
MRPL55-226ENST00000473066 NEFLP07196 543 aa18.32■□□□□ 0.52
MRPL55-226ENST00000473066 TRDNQ13061 729 aa18.32■□□□□ 0.52
MRPL55-226ENST00000473066 TKFCQ3LXA3 575 aa18.32■□□□□ 0.52
MRPL55-226ENST00000473066 CCDC174Q6PII3 467 aa18.32■□□□□ 0.52
MRPL55-226ENST00000473066 RASGRP2Q7LDG7 609 aa18.32■□□□□ 0.52
MRPL55-226ENST00000473066 ZKSCAN3Q9BRR0 538 aa18.32■□□□□ 0.52
MRPL55-226ENST00000473066 UBAC1Q9BSL1 405 aa18.32■□□□□ 0.52
MRPL55-226ENST00000473066 C11orf49Q9H6J7 331 aa18.32■□□□□ 0.52
MRPL55-226ENST00000473066 ACAD9Q9H845 621 aa18.32■□□□□ 0.52
MRPL55-226ENST00000473066 RNF146Q9NTX7 359 aa18.32■□□□□ 0.52
MRPL55-226ENST00000473066 PRR12Q9ULL5 1215 aa18.32■□□□□ 0.52
MRPL55-226ENST00000473066 RIPK3Q9Y572 518 aa18.32■□□□□ 0.52
MRPL55-226ENST00000473066 FRMPD2Q68DX3 1309 aaPredicted RBP18.31■□□□□ 0.52
MRPL55-226ENST00000473066 EVI5O60447 810 aa18.31■□□□□ 0.52
MRPL55-226ENST00000473066 ALAS1P13196 640 aa18.31■□□□□ 0.52
MRPL55-226ENST00000473066 ZNF792Q3KQV3 632 aa18.31■□□□□ 0.52
MRPL55-226ENST00000473066 SYDE2Q5VT97 1194 aa18.31■□□□□ 0.52
MRPL55-226ENST00000473066 DGKHQ86XP1 1220 aa18.31■□□□□ 0.52
MRPL55-226ENST00000473066 TINF2Q9BSI4 451 aa18.31■□□□□ 0.52
MRPL55-226ENST00000473066 IL25Q9H293 177 aa18.31■□□□□ 0.52
MRPL55-226ENST00000473066 KAT14Q9H8E8 782 aa18.31■□□□□ 0.52
MRPL55-226ENST00000473066 GPCPD1Q9NPB8 672 aa18.31■□□□□ 0.52
MRPL55-226ENST00000473066 NRBP1Q9UHY1 535 aa18.31■□□□□ 0.52
MRPL55-226ENST00000473066 CNPY2Q9Y2B0 182 aa18.31■□□□□ 0.52
MRPL55-226ENST00000473066 U3KPZ7 1027 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms