RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 CNNM2Q9H8M5 875 aa15.43■□□□□ 0.06
TPM3-216ENST00000473036 HOXC10Q9NYD6 342 aa15.43■□□□□ 0.06
TPM3-216ENST00000473036 GJD2Q9UKL4 321 aa15.43■□□□□ 0.06
TPM3-216ENST00000473036 MTMR7Q9Y216 660 aa15.43■□□□□ 0.06
TPM3-216ENST00000473036 VWA5AO00534 786 aa15.42■□□□□ 0.06
TPM3-216ENST00000473036 PDHBP11177 359 aa15.42■□□□□ 0.06
TPM3-216ENST00000473036 PRKCZQ05513 592 aa15.42■□□□□ 0.06
TPM3-216ENST00000473036 CASC1Q6TDU7 716 aa15.42■□□□□ 0.06
TPM3-216ENST00000473036 PXYLP1Q8TE99 480 aa15.42■□□□□ 0.06
TPM3-216ENST00000473036 U2AF1L4Q8WU68 220 aaKnown RBP15.42■□□□□ 0.06
TPM3-216ENST00000473036 SLF1Q9BQI6 1058 aa15.42■□□□□ 0.06
TPM3-216ENST00000473036 MOV10L1Q9BXT6 1211 aaKnown RBP15.42■□□□□ 0.06
TPM3-216ENST00000473036 ZNF214Q9UL59 606 aaPredicted RBP15.42■□□□□ 0.06
TPM3-216ENST00000473036 A0A0C4DFX4 3053 aa15.42■□□□□ 0.06
TPM3-216ENST00000473036 TMEM232C9JQI7 657 aa15.41■□□□□ 0.06
TPM3-216ENST00000473036 FARP2O94887 1054 aaPredicted RBP15.41■□□□□ 0.06
TPM3-216ENST00000473036 SGPL1O95470 568 aa15.41■□□□□ 0.06
TPM3-216ENST00000473036 SLC1A4P43007 532 aa15.41■□□□□ 0.06
TPM3-216ENST00000473036 NT5C2P49902 561 aa15.41■□□□□ 0.06
TPM3-216ENST00000473036 SNAP25P60880 206 aa15.41■□□□□ 0.06
TPM3-216ENST00000473036 IRF5Q13568 498 aa15.41■□□□□ 0.06
TPM3-216ENST00000473036 TSGA10IPQ3SY00 556 aa15.41■□□□□ 0.06
TPM3-216ENST00000473036 GPR153Q6NV75 609 aa15.41■□□□□ 0.06
TPM3-216ENST00000473036 NCOA7Q8NI08 942 aa15.41■□□□□ 0.06
TPM3-216ENST00000473036 IGDCC4Q8TDY8 1250 aa15.41■□□□□ 0.06
TPM3-216ENST00000473036 GTF3C2Q8WUA4 911 aaPredicted RBP15.41■□□□□ 0.06
TPM3-216ENST00000473036 SPATC1LQ9H0A9 340 aa15.41■□□□□ 0.06
TPM3-216ENST00000473036 CPVLQ9H3G5 476 aa15.41■□□□□ 0.06
TPM3-216ENST00000473036 BIN2Q9UBW5 565 aaPredicted RBP15.41■□□□□ 0.06
TPM3-216ENST00000473036 ZNFX1Q9P2E3 1918 aaKnown RBP15.41■□□□□ 0.06
TPM3-216ENST00000473036 FRMPD2Q68DX3 1309 aaPredicted RBP15.41■□□□□ 0.06
TPM3-216ENST00000473036 DNAH12Q6ZR08 3092 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 SEC24BO95487 1268 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 TAL1P17542 331 aaPredicted RBP15.4■□□□□ 0.06
TPM3-216ENST00000473036 HSPA4P34932 840 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 FLT3LGP49771 235 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 PPP4R3BQ5MIZ7 849 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 IQCA1Q86XH1 822 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 PNMA1Q8ND90 353 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 DCAF4Q8WV16 495 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 USP6NLQ92738 828 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 KIFC2Q96AC6 838 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 USP26Q9BXU7 913 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 SLC38A10Q9HBR0 1119 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 FEM1BQ9UK73 627 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 RIPK3Q9Y572 518 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 LAMA3Q16787 3333 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 ZNF536O15090 1300 aa15.4■□□□□ 0.06
TPM3-216ENST00000473036 TNPO2O14787 897 aaKnown RBP15.39■□□□□ 0.05
TPM3-216ENST00000473036 PLA2G6O60733 806 aa15.39■□□□□ 0.05
TPM3-216ENST00000473036 GOLGA8HP0CJ92 632 aa15.39■□□□□ 0.05
TPM3-216ENST00000473036 SLC16A2P36021 539 aa15.39■□□□□ 0.05
TPM3-216ENST00000473036 TRDNQ13061 729 aa15.39■□□□□ 0.05
TPM3-216ENST00000473036 SLC35G1Q2M3R5 365 aa15.39■□□□□ 0.05
TPM3-216ENST00000473036 MORN1Q5T089 497 aa15.39■□□□□ 0.05
TPM3-216ENST00000473036 BTNL9Q6UXG8 535 aa15.39■□□□□ 0.05
TPM3-216ENST00000473036 GPR142Q7Z601 462 aa15.39■□□□□ 0.05
TPM3-216ENST00000473036 PRPF38AQ8NAV1 312 aaKnown RBP15.39■□□□□ 0.05
TPM3-216ENST00000473036 LRRC2Q9BYS8 371 aa15.39■□□□□ 0.05
TPM3-216ENST00000473036 LY9Q9HBG7 655 aa15.39■□□□□ 0.05
TPM3-216ENST00000473036 GPCPD1Q9NPB8 672 aa15.39■□□□□ 0.05
TPM3-216ENST00000473036 PRR12Q9ULL5 1215 aa15.39■□□□□ 0.05
TPM3-216ENST00000473036 SNX14Q9Y5W7 946 aa15.39■□□□□ 0.05
TPM3-216ENST00000473036 BAZ2BQ9UIF8 2168 aaKnown RBP15.38■□□□□ 0.05
TPM3-216ENST00000473036 COL6A3P12111 3177 aa15.38■□□□□ 0.05
TPM3-216ENST00000473036 IFIT3O14879 490 aaKnown RBP15.38■□□□□ 0.05
TPM3-216ENST00000473036 PRC1O43663 620 aa15.38■□□□□ 0.05
TPM3-216ENST00000473036 ADCY3O60266 1144 aa15.38■□□□□ 0.05
TPM3-216ENST00000473036 EVI5O60447 810 aa15.38■□□□□ 0.05
TPM3-216ENST00000473036 CPA1P15085 419 aa15.38■□□□□ 0.05
TPM3-216ENST00000473036 ERCC3P19447 782 aa15.38■□□□□ 0.05
TPM3-216ENST00000473036 STAT2P52630 851 aa15.38■□□□□ 0.05
TPM3-216ENST00000473036 EXOSC10Q01780 885 aaKnown RBP15.38■□□□□ 0.05
TPM3-216ENST00000473036 ZNF543Q08ER8 600 aa15.38■□□□□ 0.05
TPM3-216ENST00000473036 IFIT1BQ5T764 474 aaKnown RBP15.38■□□□□ 0.05
TPM3-216ENST00000473036 RALYLQ86SE5 291 aaKnown RBP15.38■□□□□ 0.05
TPM3-216ENST00000473036 MB21D1Q8N884 522 aa15.38■□□□□ 0.05
TPM3-216ENST00000473036 TCEANC2Q96MN5 208 aa15.38■□□□□ 0.05
TPM3-216ENST00000473036 UBAC1Q9BSL1 405 aa15.38■□□□□ 0.05
TPM3-216ENST00000473036 SH2B2O14492 632 aaPredicted RBP15.37■□□□□ 0.05
TPM3-216ENST00000473036 MAPK4P31152 587 aa15.37■□□□□ 0.05
TPM3-216ENST00000473036 PLS1Q14651 629 aa15.37■□□□□ 0.05
TPM3-216ENST00000473036 CCDC96Q2M329 555 aa15.37■□□□□ 0.05
TPM3-216ENST00000473036 CCDC178Q5BJE1 867 aa15.37■□□□□ 0.05
TPM3-216ENST00000473036 PLEKHH3Q7Z736 793 aa15.37■□□□□ 0.05
TPM3-216ENST00000473036 RIOX2Q8IUF8 465 aa15.37■□□□□ 0.05
TPM3-216ENST00000473036 STAG2Q8N3U4 1231 aa15.37■□□□□ 0.05
TPM3-216ENST00000473036 SLC17A8Q8NDX2 589 aa15.37■□□□□ 0.05
TPM3-216ENST00000473036 KAT14Q9H8E8 782 aa15.37■□□□□ 0.05
TPM3-216ENST00000473036 RAVER2Q9HCJ3 691 aaKnown RBP15.37■□□□□ 0.05
TPM3-216ENST00000473036 PAK6Q9NQU5 681 aaPredicted RBP15.37■□□□□ 0.05
TPM3-216ENST00000473036 ELNP15502 786 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 PTPREP23469 700 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 BMP8BP34820 402 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 STAT3P40763 770 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 TROAPQ12815 778 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 GRB14Q14449 540 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 C8orf34Q49A92 452 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 TMEM67Q5HYA8 995 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 ANKLE1Q8NAG6 615 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms